RNA–Protein interactions for RNA: ENST00000553324.5

SHMT2-204, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-204ENST00000553324 CAVIN3Q969G5 261 aa14.33□□□□□ -0.12
SHMT2-204ENST00000553324 C19orf60Q96EN9 201 aa14.33□□□□□ -0.12
SHMT2-204ENST00000553324 TMEM237Q96Q45 408 aa14.33□□□□□ -0.12
SHMT2-204ENST00000553324 MID2Q9UJV3 735 aa14.33□□□□□ -0.12
SHMT2-204ENST00000553324 CLDN16Q9Y5I7 305 aa14.33□□□□□ -0.12
SHMT2-204ENST00000553324 DOCK10Q96BY6 2186 aa14.33□□□□□ -0.12
SHMT2-204ENST00000553324 A0A0A6YYD5 115 aa14.32□□□□□ -0.12
SHMT2-204ENST00000553324 TLDC2A0PJX2 215 aa14.32□□□□□ -0.12
SHMT2-204ENST00000553324 TCP11X1B4DZS4 312 aa14.32□□□□□ -0.12
SHMT2-204ENST00000553324 ULK1O75385 1050 aa14.32□□□□□ -0.12
SHMT2-204ENST00000553324 RASAL1O95294 804 aa14.32□□□□□ -0.12
SHMT2-204ENST00000553324 ETHE1O95571 254 aa14.32□□□□□ -0.12
SHMT2-204ENST00000553324 HSD3B1P14060 373 aa14.32□□□□□ -0.12
SHMT2-204ENST00000553324 CD46P15529 392 aa14.32□□□□□ -0.12
SHMT2-204ENST00000553324 HSD3B2P26439 372 aa14.32□□□□□ -0.12
SHMT2-204ENST00000553324 DNAJB13P59910 316 aa14.32□□□□□ -0.12
SHMT2-204ENST00000553324 TNFRSF17Q02223 184 aa14.32□□□□□ -0.12
SHMT2-204ENST00000553324 LCP2Q13094 533 aa14.32□□□□□ -0.12
SHMT2-204ENST00000553324 TUBA3CQ13748 450 aa14.32□□□□□ -0.12
SHMT2-204ENST00000553324 ELOAQ14241 798 aaKnown RBP14.32□□□□□ -0.12
SHMT2-204ENST00000553324 PRR30Q53SZ7 412 aaPredicted RBP14.32□□□□□ -0.12
SHMT2-204ENST00000553324 FCRLBQ6BAA4 426 aa14.32□□□□□ -0.12
SHMT2-204ENST00000553324 TUBA3EQ6PEY2 450 aa14.32□□□□□ -0.12
SHMT2-204ENST00000553324 ZYG11AQ6WRX3 759 aa14.32□□□□□ -0.12
SHMT2-204ENST00000553324 GPRIN3Q6ZVF9 776 aa14.32□□□□□ -0.12
SHMT2-204ENST00000553324 HOMEZQ8IX15 550 aa14.32□□□□□ -0.12
SHMT2-204ENST00000553324 CCDC63Q8NA47 563 aa14.32□□□□□ -0.12
SHMT2-204ENST00000553324 APCDD1LQ8NCL9 501 aa14.32□□□□□ -0.12
SHMT2-204ENST00000553324 DNAJB8Q8NHS0 232 aa14.32□□□□□ -0.12
SHMT2-204ENST00000553324 METTL6Q8TCB7 284 aa14.32□□□□□ -0.12
SHMT2-204ENST00000553324 AENQ8WTP8 325 aaKnown RBP14.32□□□□□ -0.12
SHMT2-204ENST00000553324 FAR1Q8WVX9 515 aa14.32□□□□□ -0.12
SHMT2-204ENST00000553324 ANKRD9Q96BM1 317 aaPredicted RBP14.32□□□□□ -0.12
SHMT2-204ENST00000553324 DGAT2Q96PD7 388 aa14.32□□□□□ -0.12
SHMT2-204ENST00000553324 PELOQ9BRX2 385 aaKnown RBP14.32□□□□□ -0.12
SHMT2-204ENST00000553324 SORBS1Q9BX66 1292 aaKnown RBP14.32□□□□□ -0.12
SHMT2-204ENST00000553324 ZNF717Q9BY31 904 aaPredicted RBP14.32□□□□□ -0.12
SHMT2-204ENST00000553324 ATG4BQ9Y4P1 393 aa14.32□□□□□ -0.12
SHMT2-204ENST00000553324 ASB4Q9Y574 426 aa14.32□□□□□ -0.12
SHMT2-204ENST00000553324 CNTRLQ7Z7A1 2325 aa14.32□□□□□ -0.12
SHMT2-204ENST00000553324 RELNP78509 3460 aa14.32□□□□□ -0.12
SHMT2-204ENST00000553324 TRBV11-1A0A0K0K1C0 115 aa14.31□□□□□ -0.12
SHMT2-204ENST00000553324 GABRR3A8MPY1 467 aa14.31□□□□□ -0.12
SHMT2-204ENST00000553324 PPP6CO00743 305 aa14.31□□□□□ -0.12
SHMT2-204ENST00000553324 LDB3O75112 727 aa14.31□□□□□ -0.12
SHMT2-204ENST00000553324 EEDO75530 441 aaKnown RBP14.31□□□□□ -0.12
SHMT2-204ENST00000553324 OR4F21O95013 312 aa14.31□□□□□ -0.12
SHMT2-204ENST00000553324 CBX6O95503 412 aa14.31□□□□□ -0.12
SHMT2-204ENST00000553324 F10P00742 488 aa14.31□□□□□ -0.12
SHMT2-204ENST00000553324 PDYNP01213 254 aa14.31□□□□□ -0.12
SHMT2-204ENST00000553324 CRYABP02511 175 aaKnown RBP14.31□□□□□ -0.12
SHMT2-204ENST00000553324 PROCP04070 461 aa14.31□□□□□ -0.12
SHMT2-204ENST00000553324 ENO1P06733 434 aaKnown RBP14.31□□□□□ -0.12
SHMT2-204ENST00000553324 TSPAN8P19075 237 aa14.31□□□□□ -0.12
SHMT2-204ENST00000553324 GNLYP22749 145 aa14.31□□□□□ -0.12
SHMT2-204ENST00000553324 CD96P40200 585 aa14.31□□□□□ -0.12
SHMT2-204ENST00000553324 STT3AP46977 705 aa14.31□□□□□ -0.12
SHMT2-204ENST00000553324 CYB561P49447 251 aa14.31□□□□□ -0.12
SHMT2-204ENST00000553324 GPR143P51810 404 aa14.31□□□□□ -0.12
SHMT2-204ENST00000553324 MLF1P58340 268 aa14.31□□□□□ -0.12
SHMT2-204ENST00000553324 OC90Q02509 493 aaPredicted RBP14.31□□□□□ -0.12
SHMT2-204ENST00000553324 SLC18A2Q05940 514 aa14.31□□□□□ -0.12
SHMT2-204ENST00000553324 SGO1Q5FBB7 561 aa14.31□□□□□ -0.12
SHMT2-204ENST00000553324 ZNF766Q5HY98 468 aa14.31□□□□□ -0.12
SHMT2-204ENST00000553324 CFAP157Q5JU67 520 aa14.31□□□□□ -0.12
SHMT2-204ENST00000553324 CCNYL2Q5T2Q4 361 aa14.31□□□□□ -0.12
SHMT2-204ENST00000553324 RPS27LQ71UM5 84 aaKnown RBP14.31□□□□□ -0.12
SHMT2-204ENST00000553324 METTL4Q8N3J2 472 aa14.31□□□□□ -0.12
SHMT2-204ENST00000553324 KIF2BQ8N4N8 673 aa14.31□□□□□ -0.12
SHMT2-204ENST00000553324 GBP7Q8N8V2 638 aaPredicted RBP14.31□□□□□ -0.12
SHMT2-204ENST00000553324 OR5L2Q8NGL0 311 aa14.31□□□□□ -0.12
SHMT2-204ENST00000553324 OR8K3Q8NH51 312 aa14.31□□□□□ -0.12
SHMT2-204ENST00000553324 GRHL3Q8TE85 626 aa14.31□□□□□ -0.12
SHMT2-204ENST00000553324 PTPMT1Q8WUK0 201 aaPredicted RBP14.31□□□□□ -0.12
SHMT2-204ENST00000553324 NCLNQ969V3 563 aa14.31□□□□□ -0.12
SHMT2-204ENST00000553324 ART5Q96L15 291 aa14.31□□□□□ -0.12
SHMT2-204ENST00000553324 IQCGQ9H095 443 aaKnown RBP14.31□□□□□ -0.12
SHMT2-204ENST00000553324 VPS29Q9UBQ0 182 aa14.31□□□□□ -0.12
SHMT2-204ENST00000553324 ZNF225Q9UK10 706 aa14.31□□□□□ -0.12
SHMT2-204ENST00000553324 SLC12A4Q9UP95 1085 aa14.31□□□□□ -0.12
SHMT2-204ENST00000553324 C17orf105B2RV13 164 aa14.3□□□□□ -0.12
SHMT2-204ENST00000553324 G3V2L1 256 aa14.3□□□□□ -0.12
SHMT2-204ENST00000553324 TGFBR3LH3BV60 316 aa14.3□□□□□ -0.12
SHMT2-204ENST00000553324 TMPRSS11DO60235 418 aa14.3□□□□□ -0.12
SHMT2-204ENST00000553324 PLIN3O60664 434 aa14.3□□□□□ -0.12
SHMT2-204ENST00000553324 ESRRBO95718 433 aa14.3□□□□□ -0.12
SHMT2-204ENST00000553324 GPR75O95800 540 aa14.3□□□□□ -0.12
SHMT2-204ENST00000553324 KLK1P06870 262 aa14.3□□□□□ -0.12
SHMT2-204ENST00000553324 NR2F6P10588 404 aa14.3□□□□□ -0.12
SHMT2-204ENST00000553324 CPA3P15088 417 aa14.3□□□□□ -0.12
SHMT2-204ENST00000553324 HMOX2P30519 316 aa14.3□□□□□ -0.12
SHMT2-204ENST00000553324 TRHRP34981 398 aaPredicted RBP14.3□□□□□ -0.12
SHMT2-204ENST00000553324 HNRNPH2P55795 449 aaKnown RBP14.3□□□□□ -0.12
SHMT2-204ENST00000553324 IGLV3-21P80748 117 aaPredicted RBP14.3□□□□□ -0.12
SHMT2-204ENST00000553324 PLIN5Q00G26 463 aa14.3□□□□□ -0.12
SHMT2-204ENST00000553324 CSTF3Q12996 717 aaKnown RBP14.3□□□□□ -0.12
SHMT2-204ENST00000553324 UBAP2LQ14157 1087 aaKnown RBP14.3□□□□□ -0.12
SHMT2-204ENST00000553324 OR1C1Q15619 314 aa14.3□□□□□ -0.12
SHMT2-204ENST00000553324 ERCC6LQ2NKX8 1250 aa14.3□□□□□ -0.12
SHMT2-204ENST00000553324 FHL5Q5TD97 284 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms