RNA–Protein interactions for RNA: ENST00000552215.5

CHPT1-208, Transcript of choline phosphotransferase 1, humanhuman

TSL 1 (best)

Gene CHPT1, Length 4,342 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-208ENST00000552215 METTL21CQ5VZV1 264 aa7.74□□□□□ -1.17
CHPT1-208ENST00000552215 MEX3DQ86XN8 651 aaKnown RBP7.74□□□□□ -1.17
CHPT1-208ENST00000552215 TTLQ8NG68 377 aa7.74□□□□□ -1.17
CHPT1-208ENST00000552215 CYGBQ8WWM9 190 aa7.74□□□□□ -1.17
CHPT1-208ENST00000552215 NAT6Q93015 286 aa7.74□□□□□ -1.17
CHPT1-208ENST00000552215 ZBED6CLQ96FA7 236 aaPredicted RBP7.74□□□□□ -1.17
CHPT1-208ENST00000552215 LINC00615Q96LM1 132 aaPredicted RBP7.74□□□□□ -1.17
CHPT1-208ENST00000552215 COL21A1Q96P44 957 aa7.74□□□□□ -1.17
CHPT1-208ENST00000552215 CSF3RQ99062 836 aa7.74□□□□□ -1.17
CHPT1-208ENST00000552215 CRB3Q9BUF7 120 aa7.74□□□□□ -1.17
CHPT1-208ENST00000552215 CCDC106Q9BWC9 280 aa7.74□□□□□ -1.17
CHPT1-208ENST00000552215 LRRN3Q9H3W5 708 aa7.74□□□□□ -1.17
CHPT1-208ENST00000552215 PLCL2Q9UPR0 1127 aa7.74□□□□□ -1.17
CHPT1-208ENST00000552215 PCM1Q15154 2024 aa7.74□□□□□ -1.17
CHPT1-208ENST00000552215 A0A1W2PR77 199 aa7.74□□□□□ -1.17
CHPT1-208ENST00000552215 LRIT2A6NDA9 550 aa7.74□□□□□ -1.17
CHPT1-208ENST00000552215 C9J4A7 227 aa7.74□□□□□ -1.17
CHPT1-208ENST00000552215 EIF3FO00303 357 aaPredicted RBP7.74□□□□□ -1.17
CHPT1-208ENST00000552215 AIFM1O95831 613 aa7.74□□□□□ -1.17
CHPT1-208ENST00000552215 C1QCP02747 245 aa7.74□□□□□ -1.17
CHPT1-208ENST00000552215 PEBP1P30086 187 aaKnown RBP7.74□□□□□ -1.17
CHPT1-208ENST00000552215 CAPZBP47756 277 aa7.74□□□□□ -1.17
CHPT1-208ENST00000552215 RPS18P62269 152 aaKnown RBP7.74□□□□□ -1.17
CHPT1-208ENST00000552215 KRT72Q14CN4 511 aa7.74□□□□□ -1.17
CHPT1-208ENST00000552215 SAMD4BQ5PRF9 694 aaKnown RBP7.74□□□□□ -1.17
CHPT1-208ENST00000552215 NANOGP8Q6NSW7 305 aa7.74□□□□□ -1.17
CHPT1-208ENST00000552215 CNPY4Q8N129 248 aa7.74□□□□□ -1.17
CHPT1-208ENST00000552215 COX18Q8N8Q8 333 aa7.74□□□□□ -1.17
CHPT1-208ENST00000552215 OR2L5Q8NG80 312 aa7.74□□□□□ -1.17
CHPT1-208ENST00000552215 NFKBIDQ8NI38 313 aa7.74□□□□□ -1.17
CHPT1-208ENST00000552215 LZICQ8WZA0 190 aa7.74□□□□□ -1.17
CHPT1-208ENST00000552215 C16orf58Q96GQ5 468 aa7.74□□□□□ -1.17
CHPT1-208ENST00000552215 TEFMQ96QE5 360 aaKnown RBP7.74□□□□□ -1.17
CHPT1-208ENST00000552215 SIKE1Q9BRV8 207 aa7.74□□□□□ -1.17
CHPT1-208ENST00000552215 LRFN3Q9BTN0 628 aa7.74□□□□□ -1.17
CHPT1-208ENST00000552215 STRADBQ9C0K7 418 aa7.74□□□□□ -1.17
CHPT1-208ENST00000552215 NANOGQ9H9S0 305 aa7.74□□□□□ -1.17
CHPT1-208ENST00000552215 SLC7A8Q9UHI5 535 aa7.74□□□□□ -1.17
CHPT1-208ENST00000552215 PCDHGA4Q9Y5G9 962 aa7.74□□□□□ -1.17
CHPT1-208ENST00000552215 ROS1P08922 2347 aa7.74□□□□□ -1.17
CHPT1-208ENST00000552215 DNAJC13O75165 2243 aa7.74□□□□□ -1.17
CHPT1-208ENST00000552215 USP34Q70CQ2 3546 aa7.74□□□□□ -1.17
CHPT1-208ENST00000552215 PRSS51A0A1B0GVH4 220 aa7.74□□□□□ -1.17
CHPT1-208ENST00000552215 NOBOXO60393 691 aa7.74□□□□□ -1.17
CHPT1-208ENST00000552215 T-ENOLP0DO92 83 aa7.74□□□□□ -1.17
CHPT1-208ENST00000552215 NUDT1P36639 197 aa7.74□□□□□ -1.17
CHPT1-208ENST00000552215 AP2B1P63010 937 aa7.74□□□□□ -1.17
CHPT1-208ENST00000552215 EEF1A2Q05639 463 aaKnown RBP7.74□□□□□ -1.17
CHPT1-208ENST00000552215 COL19A1Q14993 1142 aa7.74□□□□□ -1.17
CHPT1-208ENST00000552215 UGT3A2Q3SY77 523 aa7.74□□□□□ -1.17
CHPT1-208ENST00000552215 C16orf47Q6ZP98 133 aaPredicted RBP7.74□□□□□ -1.17
CHPT1-208ENST00000552215 RAB11FIP2Q7L804 512 aa7.74□□□□□ -1.17
CHPT1-208ENST00000552215 STK32CQ86UX6 486 aa7.74□□□□□ -1.17
CHPT1-208ENST00000552215 NLGN4XQ8N0W4 816 aa7.74□□□□□ -1.17
CHPT1-208ENST00000552215 OXR1Q8N573 874 aa7.74□□□□□ -1.17
CHPT1-208ENST00000552215 AGBL5Q8NDL9 886 aa7.74□□□□□ -1.17
CHPT1-208ENST00000552215 OR51Q1Q8NH59 317 aa7.74□□□□□ -1.17
CHPT1-208ENST00000552215 TSLPQ969D9 159 aa7.74□□□□□ -1.17
CHPT1-208ENST00000552215 C3orf14Q9HBI5 128 aa7.74□□□□□ -1.17
CHPT1-208ENST00000552215 A0A1B0GTQ1 180 aa7.74□□□□□ -1.17
CHPT1-208ENST00000552215 A0A1W2PP18 115 aa7.74□□□□□ -1.17
CHPT1-208ENST00000552215 M0QX08 132 aa7.74□□□□□ -1.17
CHPT1-208ENST00000552215 HYAL3O43820 417 aaPredicted RBP7.74□□□□□ -1.17
CHPT1-208ENST00000552215 KCNJ13O60928 360 aa7.74□□□□□ -1.17
CHPT1-208ENST00000552215 FGF4P08620 206 aa7.74□□□□□ -1.17
CHPT1-208ENST00000552215 ATP5A1P25705 553 aaKnown RBP7.74□□□□□ -1.17
CHPT1-208ENST00000552215 PSMA4P25789 261 aaKnown RBP7.74□□□□□ -1.17
CHPT1-208ENST00000552215 ARHGAP19Q14CB8 494 aa7.74□□□□□ -1.17
CHPT1-208ENST00000552215 COLEC12Q5KU26 742 aa7.74□□□□□ -1.17
CHPT1-208ENST00000552215 GALNT6Q8NCL4 622 aa7.74□□□□□ -1.17
CHPT1-208ENST00000552215 ZFP28Q8NHY6 868 aa7.74□□□□□ -1.17
CHPT1-208ENST00000552215 ERVK-19Q9WJR5 959 aa7.74□□□□□ -1.17
CHPT1-208ENST00000552215 PCDHB14Q9Y5E9 798 aa7.74□□□□□ -1.17
CHPT1-208ENST00000552215 ATRXP46100 2492 aa7.73□□□□□ -1.17
CHPT1-208ENST00000552215 TRBC2A0A5B9 178 aa7.73□□□□□ -1.17
CHPT1-208ENST00000552215 C19orf67A6NJJ6 358 aa7.73□□□□□ -1.17
CHPT1-208ENST00000552215 TCN2P20062 427 aa7.73□□□□□ -1.17
CHPT1-208ENST00000552215 CBLP22681 906 aa7.73□□□□□ -1.17
CHPT1-208ENST00000552215 GABRA3P34903 492 aa7.73□□□□□ -1.17
CHPT1-208ENST00000552215 ITGA1P56199 1179 aa7.73□□□□□ -1.17
CHPT1-208ENST00000552215 OR4D2P58180 307 aa7.73□□□□□ -1.17
CHPT1-208ENST00000552215 HBA1P69905 142 aa7.73□□□□□ -1.17
CHPT1-208ENST00000552215 CHAF1BQ13112 559 aa7.73□□□□□ -1.17
CHPT1-208ENST00000552215 ZNHIT3Q15649 155 aaPredicted RBP7.73□□□□□ -1.17
CHPT1-208ENST00000552215 TRMT5Q32P41 509 aaKnown RBP7.73□□□□□ -1.17
CHPT1-208ENST00000552215 MTX3Q5HYI7 312 aa7.73□□□□□ -1.17
CHPT1-208ENST00000552215 LPCAT4Q643R3 524 aa7.73□□□□□ -1.17
CHPT1-208ENST00000552215 FUNDC1Q8IVP5 155 aa7.73□□□□□ -1.17
CHPT1-208ENST00000552215 FAM9CQ8IZT9 166 aa7.73□□□□□ -1.17
CHPT1-208ENST00000552215 CHCHD4Q8N4Q1 142 aa7.73□□□□□ -1.17
CHPT1-208ENST00000552215 RTKNQ9BST9 563 aa7.73□□□□□ -1.17
CHPT1-208ENST00000552215 SGPP1Q9BX95 441 aa7.73□□□□□ -1.17
CHPT1-208ENST00000552215 C1GALT1Q9NS00 363 aa7.73□□□□□ -1.17
CHPT1-208ENST00000552215 CTSFQ9UBX1 484 aa7.73□□□□□ -1.17
CHPT1-208ENST00000552215 SEC14L3Q9UDX4 400 aa7.73□□□□□ -1.17
CHPT1-208ENST00000552215 ERVK-11Q9UQG0 969 aa7.73□□□□□ -1.17
CHPT1-208ENST00000552215 ENTPD2Q9Y5L3 495 aa7.73□□□□□ -1.17
CHPT1-208ENST00000552215 TLCD2A6NGC4 264 aa7.73□□□□□ -1.17
CHPT1-208ENST00000552215 GTPBP1O00178 669 aaKnown RBP7.73□□□□□ -1.17
CHPT1-208ENST00000552215 RNH1P13489 461 aaKnown RBP7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms