RNA–Protein interactions for RNA: ENST00000550477.5

SMARCD1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 911 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-209ENST00000550477 ZNF490Q9ULM2 529 aaPredicted RBP21.38■■□□□ 1.01
SMARCD1-209ENST00000550477 PINLYPA6NC86 204 aa21.37■■□□□ 1.01
SMARCD1-209ENST00000550477 CCNT2O60583 730 aaKnown RBP21.37■■□□□ 1.01
SMARCD1-209ENST00000550477 WDR1O75083 606 aa21.37■■□□□ 1.01
SMARCD1-209ENST00000550477 LDB3O75112 727 aa21.37■■□□□ 1.01
SMARCD1-209ENST00000550477 CPN2P22792 545 aa21.37■■□□□ 1.01
SMARCD1-209ENST00000550477 MSH2P43246 934 aa21.37■■□□□ 1.01
SMARCD1-209ENST00000550477 TFF3Q07654 80 aa21.37■■□□□ 1.01
SMARCD1-209ENST00000550477 CHIT1Q13231 466 aa21.37■■□□□ 1.01
SMARCD1-209ENST00000550477 TBCCQ15814 346 aa21.37■■□□□ 1.01
SMARCD1-209ENST00000550477 MPEG1Q2M385 716 aa21.37■■□□□ 1.01
SMARCD1-209ENST00000550477 SLC22A8Q8TCC7 542 aa21.37■■□□□ 1.01
SMARCD1-209ENST00000550477 RBM18Q96H35 190 aaKnown RBP21.37■■□□□ 1.01
SMARCD1-209ENST00000550477 TTYH2Q9BSA4 534 aa21.37■■□□□ 1.01
SMARCD1-209ENST00000550477 TMEM79Q9BSE2 394 aa21.37■■□□□ 1.01
SMARCD1-209ENST00000550477 NPDC1Q9NQX5 325 aaPredicted RBP21.37■■□□□ 1.01
SMARCD1-209ENST00000550477 SDAD1Q9NVU7 687 aaKnown RBP eCLIP21.37■■□□□ 1.01
SMARCD1-209ENST00000550477 MS4A12Q9NXJ0 267 aa21.37■■□□□ 1.01
SMARCD1-209ENST00000550477 RNF112Q9ULX5 631 aa21.37■■□□□ 1.01
SMARCD1-209ENST00000550477 DCHS2Q6V1P9 2916 aa21.36■■□□□ 1.01
SMARCD1-209ENST00000550477 A0A1B0GVC2 190 aa21.36■■□□□ 1.01
SMARCD1-209ENST00000550477 E7ESA3 106 aa21.36■■□□□ 1.01
SMARCD1-209ENST00000550477 G3V3Y1 287 aa21.36■■□□□ 1.01
SMARCD1-209ENST00000550477 AQP7O14520 342 aa21.36■■□□□ 1.01
SMARCD1-209ENST00000550477 TAPBPO15533 448 aa21.36■■□□□ 1.01
SMARCD1-209ENST00000550477 GLSO94925 669 aaPredicted RBP21.36■■□□□ 1.01
SMARCD1-209ENST00000550477 GABRA1P14867 456 aa21.36■■□□□ 1.01
SMARCD1-209ENST00000550477 SERPINB1P30740 379 aa21.36■■□□□ 1.01
SMARCD1-209ENST00000550477 TLX1P31314 330 aaPredicted RBP21.36■■□□□ 1.01
SMARCD1-209ENST00000550477 MAGEA5P43359 124 aa21.36■■□□□ 1.01
SMARCD1-209ENST00000550477 TRILQ7L0X0 811 aa21.36■■□□□ 1.01
SMARCD1-209ENST00000550477 VN1R5Q7Z5H4 357 aa21.36■■□□□ 1.01
SMARCD1-209ENST00000550477 TMEM251Q8N6I4 163 aa21.36■■□□□ 1.01
SMARCD1-209ENST00000550477 ACOT4Q8N9L9 421 aa21.36■■□□□ 1.01
SMARCD1-209ENST00000550477 DGAT2Q96PD7 388 aa21.36■■□□□ 1.01
SMARCD1-209ENST00000550477 TRMT1Q9NXH9 659 aaKnown RBP21.36■■□□□ 1.01
SMARCD1-209ENST00000550477 ADGRE2Q9UHX3 823 aa21.36■■□□□ 1.01
SMARCD1-209ENST00000550477 EDARQ9UNE0 448 aa21.36■■□□□ 1.01
SMARCD1-209ENST00000550477 MTO1Q9Y2Z2 717 aaKnown RBP21.36■■□□□ 1.01
SMARCD1-209ENST00000550477 MYOCOSA0A1B0GUC4 107 aa21.35■■□□□ 1.01
SMARCD1-209ENST00000550477 ATP6AP2A0A1C7CYW4 349 aa21.35■■□□□ 1.01
SMARCD1-209ENST00000550477 KLK8O60259 260 aa21.35■■□□□ 1.01
SMARCD1-209ENST00000550477 HCN1O60741 890 aa21.35■■□□□ 1.01
SMARCD1-209ENST00000550477 ATP6AP2O75787 350 aa21.35■■□□□ 1.01
SMARCD1-209ENST00000550477 CD1DP15813 335 aa21.35■■□□□ 1.01
SMARCD1-209ENST00000550477 ATP5A1P25705 553 aaKnown RBP21.35■■□□□ 1.01
SMARCD1-209ENST00000550477 PEX19P40855 299 aa21.35■■□□□ 1.01
SMARCD1-209ENST00000550477 HYAL4Q2M3T9 481 aa21.35■■□□□ 1.01
SMARCD1-209ENST00000550477 SLC22A10Q63ZE4 541 aa21.35■■□□□ 1.01
SMARCD1-209ENST00000550477 CAPN12Q6ZSI9 719 aa21.35■■□□□ 1.01
SMARCD1-209ENST00000550477 LRRC70Q7Z2Q7 622 aa21.35■■□□□ 1.01
SMARCD1-209ENST00000550477 DND1Q8IYX4 353 aaKnown RBP21.35■■□□□ 1.01
SMARCD1-209ENST00000550477 SPATA6LQ8N4H0 392 aa21.35■■□□□ 1.01
SMARCD1-209ENST00000550477 RPRMLQ8N4K4 120 aa21.35■■□□□ 1.01
SMARCD1-209ENST00000550477 NUBPLQ8TB37 319 aa21.35■■□□□ 1.01
SMARCD1-209ENST00000550477 STAG3L4Q8TBR4 150 aa21.35■■□□□ 1.01
SMARCD1-209ENST00000550477 SREK1Q8WXA9 508 aaKnown RBP21.35■■□□□ 1.01
SMARCD1-209ENST00000550477 LRRC46Q96FV0 321 aa21.35■■□□□ 1.01
SMARCD1-209ENST00000550477 CMTM7Q96FZ5 175 aa21.35■■□□□ 1.01
SMARCD1-209ENST00000550477 CPNE1Q99829 537 aa21.35■■□□□ 1.01
SMARCD1-209ENST00000550477 MAPKAP1Q9BPZ7 522 aa21.35■■□□□ 1.01
SMARCD1-209ENST00000550477 ALKBH4Q9NXW9 302 aa21.35■■□□□ 1.01
SMARCD1-209ENST00000550477 PTBP2Q9UKA9 531 aaKnown RBP21.35■■□□□ 1.01
SMARCD1-209ENST00000550477 EML6Q6ZMW3 1958 aa21.34■■□□□ 1.01
SMARCD1-209ENST00000550477 ADGRG4Q8IZF6 3080 aa21.34■■□□□ 1.01
SMARCD1-209ENST00000550477 TBX6O95947 436 aaPredicted RBP21.34■■□□□ 1.01
SMARCD1-209ENST00000550477 PCNAP12004 261 aa21.34■■□□□ 1.01
SMARCD1-209ENST00000550477 HIST1H1TP22492 207 aaPredicted RBP21.34■■□□□ 1.01
SMARCD1-209ENST00000550477 SSR2P43308 183 aa21.34■■□□□ 1.01
SMARCD1-209ENST00000550477 ART1P52961 327 aa21.34■■□□□ 1.01
SMARCD1-209ENST00000550477 CALCOCO2Q13137 446 aa21.34■■□□□ 1.01
SMARCD1-209ENST00000550477 FASTKD3Q14CZ7 662 aaKnown RBP21.34■■□□□ 1.01
SMARCD1-209ENST00000550477 SLC25A35Q3KQZ1 300 aa21.34■■□□□ 1.01
SMARCD1-209ENST00000550477 PIGGQ5H8A4 983 aa21.34■■□□□ 1.01
SMARCD1-209ENST00000550477 MED27Q6P2C8 311 aa21.34■■□□□ 1.01
SMARCD1-209ENST00000550477 SLC15A4Q8N697 577 aa21.34■■□□□ 1.01
SMARCD1-209ENST00000550477 PDPRQ8NCN5 879 aa21.34■■□□□ 1.01
SMARCD1-209ENST00000550477 ESAMQ96AP7 390 aa21.34■■□□□ 1.01
SMARCD1-209ENST00000550477 CD244Q9BZW8 370 aa21.34■■□□□ 1.01
SMARCD1-209ENST00000550477 CAB39LQ9H9S4 337 aa21.34■■□□□ 1.01
SMARCD1-209ENST00000550477 BOKQ9UMX3 212 aaPredicted RBP21.34■■□□□ 1.01
SMARCD1-209ENST00000550477 SAR1BQ9Y6B6 198 aa21.34■■□□□ 1.01
SMARCD1-209ENST00000550477 SPG11Q96JI7 2443 aa21.33■■□□□ 1.01
SMARCD1-209ENST00000550477 TRGV5A0A0B4J1U4 118 aa21.33■■□□□ 1.01
SMARCD1-209ENST00000550477 CASP2P42575 452 aa21.33■■□□□ 1.01
SMARCD1-209ENST00000550477 STT3AP46977 705 aa21.33■■□□□ 1.01
SMARCD1-209ENST00000550477 DNASE1L1P49184 302 aa21.33■■□□□ 1.01
SMARCD1-209ENST00000550477 ASPHQ12797 758 aa21.33■■□□□ 1.01
SMARCD1-209ENST00000550477 FBXO48Q5FWF7 155 aa21.33■■□□□ 1.01
SMARCD1-209ENST00000550477 ZNF721Q8TF20 911 aa21.33■■□□□ 1.01
SMARCD1-209ENST00000550477 ZNF473Q8WTR7 871 aaKnown RBP21.33■■□□□ 1.01
SMARCD1-209ENST00000550477 TANKQ92844 425 aa21.33■■□□□ 1.01
SMARCD1-209ENST00000550477 SENP5Q96HI0 755 aaPredicted RBP21.33■■□□□ 1.01
SMARCD1-209ENST00000550477 MCMBPQ9BTE3 642 aa21.33■■□□□ 1.01
SMARCD1-209ENST00000550477 MS4A8Q9BY19 250 aa21.33■■□□□ 1.01
SMARCD1-209ENST00000550477 RNF14Q9UBS8 474 aa21.33■■□□□ 1.01
SMARCD1-209ENST00000550477 B4GALT7Q9UBV7 327 aa21.33■■□□□ 1.01
SMARCD1-209ENST00000550477 ATG4BQ9Y4P1 393 aa21.33■■□□□ 1.01
SMARCD1-209ENST00000550477 SEC23IPQ9Y6Y8 1000 aaKnown RBP21.33■■□□□ 1.01
SMARCD1-209ENST00000550477 A0A0G2JMM0 328 aa21.32■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms