RNA–Protein interactions for RNA: ENST00000550220.1

VTI1BP3-201, Transcript of vesicle transport through interaction with t-SNAREs 1B pseudogene 3, humanhuman

BASIC

Gene VTI1BP3, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1BP3-201ENST00000550220 C17orf105B2RV13 164 aa10.11□□□□□ -0.79
VTI1BP3-201ENST00000550220 UBXN8O00124 270 aa10.11□□□□□ -0.79
VTI1BP3-201ENST00000550220 KLK8O60259 260 aa10.11□□□□□ -0.79
VTI1BP3-201ENST00000550220 FAM155BO75949 473 aa10.11□□□□□ -0.79
VTI1BP3-201ENST00000550220 OR2J2O76002 312 aa10.11□□□□□ -0.79
VTI1BP3-201ENST00000550220 CLDN14O95500 239 aa10.11□□□□□ -0.79
VTI1BP3-201ENST00000550220 RBP1P09455 135 aa10.11□□□□□ -0.79
VTI1BP3-201ENST00000550220 MTHFD2P13995 350 aa10.11□□□□□ -0.79
VTI1BP3-201ENST00000550220 BUD31P41223 144 aaPredicted RBP10.11□□□□□ -0.79
VTI1BP3-201ENST00000550220 STT3AP46977 705 aa10.11□□□□□ -0.79
VTI1BP3-201ENST00000550220 SERPINB8P50452 374 aa10.11□□□□□ -0.79
VTI1BP3-201ENST00000550220 HNRNPFP52597 415 aaKnown RBP10.11□□□□□ -0.79
VTI1BP3-201ENST00000550220 RNF4P78317 190 aa10.11□□□□□ -0.79
VTI1BP3-201ENST00000550220 DLG1Q12959 904 aa10.11□□□□□ -0.79
VTI1BP3-201ENST00000550220 SLAMF1Q13291 335 aa10.11□□□□□ -0.79
VTI1BP3-201ENST00000550220 CUL3Q13618 768 aa10.11□□□□□ -0.79
VTI1BP3-201ENST00000550220 SETDB1Q15047 1291 aa10.11□□□□□ -0.79
VTI1BP3-201ENST00000550220 PFKFB4Q16877 469 aa10.11□□□□□ -0.79
VTI1BP3-201ENST00000550220 WHAMMP3Q1A5X7 153 aa10.11□□□□□ -0.79
VTI1BP3-201ENST00000550220 MPEG1Q2M385 716 aa10.11□□□□□ -0.79
VTI1BP3-201ENST00000550220 MROH9Q5TGP6 573 aa10.11□□□□□ -0.79
VTI1BP3-201ENST00000550220 RTL4Q6ZR62 310 aa10.11□□□□□ -0.79
VTI1BP3-201ENST00000550220 GK5Q6ZS86 529 aa10.11□□□□□ -0.79
VTI1BP3-201ENST00000550220 TAOK1Q7L7X3 1001 aa10.11□□□□□ -0.79
VTI1BP3-201ENST00000550220 GPR180Q86V85 440 aa10.11□□□□□ -0.79
VTI1BP3-201ENST00000550220 SLC22A16Q86VW1 577 aa10.11□□□□□ -0.79
VTI1BP3-201ENST00000550220 DOLPP1Q86YN1 238 aa10.11□□□□□ -0.79
VTI1BP3-201ENST00000550220 MYLK4Q86YV6 388 aaPredicted RBP10.11□□□□□ -0.79
VTI1BP3-201ENST00000550220 MCEMP1Q8IX19 187 aa10.11□□□□□ -0.79
VTI1BP3-201ENST00000550220 DND1Q8IYX4 353 aaKnown RBP10.11□□□□□ -0.79
VTI1BP3-201ENST00000550220 CNPY4Q8N129 248 aa10.11□□□□□ -0.79
VTI1BP3-201ENST00000550220 SLC15A4Q8N697 577 aa10.11□□□□□ -0.79
VTI1BP3-201ENST00000550220 TEX9Q8N6V9 391 aa10.11□□□□□ -0.79
VTI1BP3-201ENST00000550220 TMEM52Q8NDY8 209 aa10.11□□□□□ -0.79
VTI1BP3-201ENST00000550220 MNS1Q8NEH6 495 aa10.11□□□□□ -0.79
VTI1BP3-201ENST00000550220 HUS1BQ8NHY5 278 aa10.11□□□□□ -0.79
VTI1BP3-201ENST00000550220 NUBPLQ8TB37 319 aa10.11□□□□□ -0.79
VTI1BP3-201ENST00000550220 FAM57AQ8TBR7 257 aa10.11□□□□□ -0.79
VTI1BP3-201ENST00000550220 AGAP11Q8TF27 550 aa10.11□□□□□ -0.79
VTI1BP3-201ENST00000550220 KCTD4Q8WVF5 259 aa10.11□□□□□ -0.79
VTI1BP3-201ENST00000550220 DGAT2Q96PD7 388 aa10.11□□□□□ -0.79
VTI1BP3-201ENST00000550220 CSF3RQ99062 836 aa10.11□□□□□ -0.79
VTI1BP3-201ENST00000550220 MAPKAP1Q9BPZ7 522 aa10.11□□□□□ -0.79
VTI1BP3-201ENST00000550220 OR8D2Q9GZM6 311 aa10.11□□□□□ -0.79
VTI1BP3-201ENST00000550220 RPF2Q9H7B2 306 aaKnown RBP10.11□□□□□ -0.79
VTI1BP3-201ENST00000550220 WDR41Q9HAD4 459 aa10.11□□□□□ -0.79
VTI1BP3-201ENST00000550220 SNX15Q9NRS6 342 aa10.11□□□□□ -0.79
VTI1BP3-201ENST00000550220 LYARQ9NX58 379 aaKnown RBP10.11□□□□□ -0.79
VTI1BP3-201ENST00000550220 COQ3Q9NZJ6 369 aa10.11□□□□□ -0.79
VTI1BP3-201ENST00000550220 ZNF223Q9UK11 482 aaPredicted RBP10.11□□□□□ -0.79
VTI1BP3-201ENST00000550220 ASB1Q9Y576 335 aa10.11□□□□□ -0.79
VTI1BP3-201ENST00000550220 IKBKGQ9Y6K9 419 aa10.11□□□□□ -0.79
VTI1BP3-201ENST00000550220 ITPR2Q14571 2701 aa10.1□□□□□ -0.79
VTI1BP3-201ENST00000550220 TGFBR3LH3BV60 316 aa10.1□□□□□ -0.79
VTI1BP3-201ENST00000550220 FOXE1O00358 373 aaPredicted RBP10.1□□□□□ -0.79
VTI1BP3-201ENST00000550220 LDB3O75112 727 aa10.1□□□□□ -0.79
VTI1BP3-201ENST00000550220 WISP2O76076 250 aa10.1□□□□□ -0.79
VTI1BP3-201ENST00000550220 INHBAP08476 426 aa10.1□□□□□ -0.79
VTI1BP3-201ENST00000550220 COL6A2P12110 1019 aa10.1□□□□□ -0.79
VTI1BP3-201ENST00000550220 CNR1P21554 472 aa10.1□□□□□ -0.79
VTI1BP3-201ENST00000550220 TNFRSF8P28908 595 aa10.1□□□□□ -0.79
VTI1BP3-201ENST00000550220 GALNSP34059 522 aa10.1□□□□□ -0.79
VTI1BP3-201ENST00000550220 SERPINB9P50453 376 aa10.1□□□□□ -0.79
VTI1BP3-201ENST00000550220 ST13P50502 369 aaKnown RBP10.1□□□□□ -0.79
VTI1BP3-201ENST00000550220 HK2P52789 917 aa10.1□□□□□ -0.79
VTI1BP3-201ENST00000550220 IGLV3-21P80748 117 aaPredicted RBP10.1□□□□□ -0.79
VTI1BP3-201ENST00000550220 ADORA2A-AS1P86434 159 aa10.1□□□□□ -0.79
VTI1BP3-201ENST00000550220 PLIN5Q00G26 463 aa10.1□□□□□ -0.79
VTI1BP3-201ENST00000550220 TRADDQ15628 312 aa10.1□□□□□ -0.79
VTI1BP3-201ENST00000550220 RNFT1Q5M7Z0 435 aa10.1□□□□□ -0.79
VTI1BP3-201ENST00000550220 ADNP2Q6IQ32 1131 aa10.1□□□□□ -0.79
VTI1BP3-201ENST00000550220 IL20RBQ6UXL0 311 aa10.1□□□□□ -0.79
VTI1BP3-201ENST00000550220 ZNF793Q6ZN11 406 aa10.1□□□□□ -0.79
VTI1BP3-201ENST00000550220 GDF7Q7Z4P5 450 aa10.1□□□□□ -0.79
VTI1BP3-201ENST00000550220 MDGA2Q7Z553 956 aa10.1□□□□□ -0.79
VTI1BP3-201ENST00000550220 CENPLQ8N0S6 344 aaPredicted RBP10.1□□□□□ -0.79
VTI1BP3-201ENST00000550220 L3MBTL4Q8NA19 623 aa10.1□□□□□ -0.79
VTI1BP3-201ENST00000550220 SLC2A12Q8TD20 617 aa10.1□□□□□ -0.79
VTI1BP3-201ENST00000550220 ASB5Q8WWX0 329 aa10.1□□□□□ -0.79
VTI1BP3-201ENST00000550220 ANKRD9Q96BM1 317 aaPredicted RBP10.1□□□□□ -0.79
VTI1BP3-201ENST00000550220 MTFMTQ96DP5 389 aaKnown RBP10.1□□□□□ -0.79
VTI1BP3-201ENST00000550220 PHF12Q96QT6 1004 aa10.1□□□□□ -0.79
VTI1BP3-201ENST00000550220 RASL10BQ96S79 203 aa10.1□□□□□ -0.79
VTI1BP3-201ENST00000550220 FAM173AQ9BQD7 235 aa10.1□□□□□ -0.79
VTI1BP3-201ENST00000550220 LRRC1Q9BTT6 524 aa10.1□□□□□ -0.79
VTI1BP3-201ENST00000550220 FUT8Q9BYC5 575 aa10.1□□□□□ -0.79
VTI1BP3-201ENST00000550220 TP63Q9H3D4 680 aaPredicted RBP10.1□□□□□ -0.79
VTI1BP3-201ENST00000550220 ACSS3Q9H6R3 686 aa10.1□□□□□ -0.79
VTI1BP3-201ENST00000550220 PLSCR2Q9NRY7 297 aa10.1□□□□□ -0.79
VTI1BP3-201ENST00000550220 ZDHHC18Q9NUE0 388 aa10.1□□□□□ -0.79
VTI1BP3-201ENST00000550220 AHSPQ9NZD4 102 aa10.1□□□□□ -0.79
VTI1BP3-201ENST00000550220 PPT2Q9UMR5 302 aa10.1□□□□□ -0.79
VTI1BP3-201ENST00000550220 IQANK1A0A1B0GTG1 560 aa10.09□□□□□ -0.79
VTI1BP3-201ENST00000550220 A0A1B0GTH9 108 aa10.09□□□□□ -0.79
VTI1BP3-201ENST00000550220 OR14I1A6ND48 311 aa10.09□□□□□ -0.79
VTI1BP3-201ENST00000550220 TMEM200CA6NKL6 621 aa10.09□□□□□ -0.79
VTI1BP3-201ENST00000550220 WWP2O00308 870 aa10.09□□□□□ -0.79
VTI1BP3-201ENST00000550220 RTCAO00442 366 aaKnown RBP10.09□□□□□ -0.79
VTI1BP3-201ENST00000550220 HS6ST1O60243 411 aa10.09□□□□□ -0.79
VTI1BP3-201ENST00000550220 KRT38O76015 456 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms