RNA–Protein interactions for RNA: ENST00000549578.5

VPS29-206, Transcript of VPS29, retromer complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS29, Length 1,523 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-206ENST00000549578 MAOAP21397 527 aa19.93■□□□□ 0.78
VPS29-206ENST00000549578 ALDH9A1P49189 494 aa19.93■□□□□ 0.78
VPS29-206ENST00000549578 EMP2P54851 167 aa19.93■□□□□ 0.78
VPS29-206ENST00000549578 IL10RAQ13651 578 aa19.93■□□□□ 0.78
VPS29-206ENST00000549578 PTGR1Q14914 329 aa19.93■□□□□ 0.78
VPS29-206ENST00000549578 TMEM198Q66K66 360 aa19.93■□□□□ 0.78
VPS29-206ENST00000549578 FAAH2Q6GMR7 532 aa19.93■□□□□ 0.78
VPS29-206ENST00000549578 CLNKQ7Z7G1 428 aa19.93■□□□□ 0.78
VPS29-206ENST00000549578 ZNF595Q8IYB9 648 aa19.93■□□□□ 0.78
VPS29-206ENST00000549578 TMEM132CQ8N3T6 1108 aa19.93■□□□□ 0.78
VPS29-206ENST00000549578 CEP70Q8NHQ1 597 aa19.93■□□□□ 0.78
VPS29-206ENST00000549578 PUM2Q8TB72 1066 aaKnown RBP eCLIP19.93■□□□□ 0.784e-11■■■■□ 26.4
VPS29-206ENST00000549578 STARD8Q92502 1023 aa19.93■□□□□ 0.78
VPS29-206ENST00000549578 TSLPQ969D9 159 aa19.93■□□□□ 0.78
VPS29-206ENST00000549578 SIKE1Q9BRV8 207 aa19.93■□□□□ 0.78
VPS29-206ENST00000549578 FAM117AQ9C073 453 aa19.93■□□□□ 0.78
VPS29-206ENST00000549578 FAM107BQ9H098 131 aa19.93■□□□□ 0.78
VPS29-206ENST00000549578 WDR41Q9HAD4 459 aa19.93■□□□□ 0.78
VPS29-206ENST00000549578 PRTFDC1Q9NRG1 225 aa19.93■□□□□ 0.78
VPS29-206ENST00000549578 C5AR2Q9P296 337 aa19.93■□□□□ 0.78
VPS29-206ENST00000549578 ZFHX4Q86UP3 3567 aa19.92■□□□□ 0.78
VPS29-206ENST00000549578 GMNCA6NCL1 334 aa19.92■□□□□ 0.78
VPS29-206ENST00000549578 TAF4O00268 1085 aa19.92■□□□□ 0.78
VPS29-206ENST00000549578 CLDN4O14493 209 aa19.92■□□□□ 0.78
VPS29-206ENST00000549578 PRMT3O60678 531 aa19.92■□□□□ 0.78
VPS29-206ENST00000549578 G6PDP11413 515 aa19.92■□□□□ 0.78
VPS29-206ENST00000549578 C2orf80Q0P641 193 aa19.92■□□□□ 0.78
VPS29-206ENST00000549578 SLC13A2Q13183 592 aa19.92■□□□□ 0.78
VPS29-206ENST00000549578 FAM71E1Q6IPT2 247 aa19.92■□□□□ 0.78
VPS29-206ENST00000549578 MED25Q71SY5 747 aa19.92■□□□□ 0.78
VPS29-206ENST00000549578 PROSER1Q86XN7 944 aa19.92■□□□□ 0.78
VPS29-206ENST00000549578 SPACA3Q8IXA5 215 aa19.92■□□□□ 0.78
VPS29-206ENST00000549578 GFM2Q969S9 779 aaKnown RBP19.92■□□□□ 0.78
VPS29-206ENST00000549578 SLC45A3Q96JT2 553 aa19.92■□□□□ 0.78
VPS29-206ENST00000549578 MARK4Q96L34 752 aa19.92■□□□□ 0.78
VPS29-206ENST00000549578 PTCHD1Q96NR3 888 aa19.92■□□□□ 0.78
VPS29-206ENST00000549578 MESP1Q9BRJ9 268 aa19.92■□□□□ 0.78
VPS29-206ENST00000549578 EFHD1Q9BUP0 239 aa19.92■□□□□ 0.78
VPS29-206ENST00000549578 FAIM2Q9BWQ8 316 aa19.92■□□□□ 0.78
VPS29-206ENST00000549578 TMEM120AQ9BXJ8 343 aa19.92■□□□□ 0.78
VPS29-206ENST00000549578 ASIC5Q9NY37 505 aa19.92■□□□□ 0.78
VPS29-206ENST00000549578 ADAM21Q9UKJ8 722 aa19.92■□□□□ 0.78
VPS29-206ENST00000549578 PCDHA9Q9Y5H5 950 aa19.92■□□□□ 0.78
VPS29-206ENST00000549578 URB1O60287 2271 aaKnown RBP19.92■□□□□ 0.78
VPS29-206ENST00000549578 E9PBE3 544 aa19.92■□□□□ 0.78
VPS29-206ENST00000549578 TGFBR3LH3BV60 316 aa19.92■□□□□ 0.78
VPS29-206ENST00000549578 RRP8O43159 456 aaKnown RBP19.92■□□□□ 0.78
VPS29-206ENST00000549578 KLHL41O60662 606 aa19.92■□□□□ 0.78
VPS29-206ENST00000549578 LDB3O75112 727 aa19.92■□□□□ 0.78
VPS29-206ENST00000549578 CREG1O75629 220 aa19.92■□□□□ 0.78
VPS29-206ENST00000549578 LRATO95237 230 aa19.92■□□□□ 0.78
VPS29-206ENST00000549578 PRPS2P11908 318 aa19.92■□□□□ 0.78
VPS29-206ENST00000549578 GSTM5P46439 218 aa19.92■□□□□ 0.78
VPS29-206ENST00000549578 ID2Q02363 134 aa19.92■□□□□ 0.78
VPS29-206ENST00000549578 QSOX2Q6ZRP7 698 aa19.92■□□□□ 0.78
VPS29-206ENST00000549578 SPATA19Q7Z5L4 167 aa19.92■□□□□ 0.78
VPS29-206ENST00000549578 SCUBE1Q8IWY4 988 aa19.92■□□□□ 0.78
VPS29-206ENST00000549578 OR4N5Q8IXE1 308 aa19.92■□□□□ 0.78
VPS29-206ENST00000549578 CCNL2Q96S94 520 aaPredicted RBP19.92■□□□□ 0.78
VPS29-206ENST00000549578 RABEP2Q9H5N1 569 aa19.92■□□□□ 0.78
VPS29-206ENST00000549578 NECTIN3Q9NQS3 549 aa19.92■□□□□ 0.78
VPS29-206ENST00000549578 PRDM9Q9NQV7 894 aa19.92■□□□□ 0.78
VPS29-206ENST00000549578 G3BP2Q9UN86 482 aaKnown RBP19.92■□□□□ 0.78
VPS29-206ENST00000549578 EXO1Q9UQ84 846 aaKnown RBP19.92■□□□□ 0.78
VPS29-206ENST00000549578 MMACHCQ9Y4U1 282 aa19.92■□□□□ 0.78
VPS29-206ENST00000549578 MYOCOSA0A1B0GUC4 107 aa19.91■□□□□ 0.78
VPS29-206ENST00000549578 C1orf226A1L170 272 aa19.91■□□□□ 0.78
VPS29-206ENST00000549578 AKAP10O43572 662 aa19.91■□□□□ 0.78
VPS29-206ENST00000549578 FGF17O60258 216 aa19.91■□□□□ 0.78
VPS29-206ENST00000549578 DRD4P21917 467 aa19.91■□□□□ 0.78
VPS29-206ENST00000549578 OTX2P32243 289 aa19.91■□□□□ 0.78
VPS29-206ENST00000549578 HSD17B7P56937 341 aa19.91■□□□□ 0.78
VPS29-206ENST00000549578 HEPACAMQ14CZ8 416 aa19.91■□□□□ 0.78
VPS29-206ENST00000549578 OR52E8Q6IFG1 317 aa19.91■□□□□ 0.78
VPS29-206ENST00000549578 LANCL3Q6ZV70 420 aa19.91■□□□□ 0.78
VPS29-206ENST00000549578 IKBIPQ70UQ0 350 aa19.91■□□□□ 0.78
VPS29-206ENST00000549578 DNAJB14Q8TBM8 379 aa19.91■□□□□ 0.78
VPS29-206ENST00000549578 ANKRD9Q96BM1 317 aaPredicted RBP19.91■□□□□ 0.78
VPS29-206ENST00000549578 CCDC28BQ9BUN5 200 aa19.91■□□□□ 0.78
VPS29-206ENST00000549578 SEMA3GQ9NS98 782 aa19.91■□□□□ 0.78
VPS29-206ENST00000549578 AIG1Q9NVV5 245 aa19.91■□□□□ 0.78
VPS29-206ENST00000549578 CLDN16Q9Y5I7 305 aa19.91■□□□□ 0.78
VPS29-206ENST00000549578 BLACEA4D250 179 aa19.9■□□□□ 0.78
VPS29-206ENST00000549578 EFSO43281 561 aa19.9■□□□□ 0.78
VPS29-206ENST00000549578 CTNSO60931 367 aa19.9■□□□□ 0.78
VPS29-206ENST00000549578 ALOX12BO75342 701 aa19.9■□□□□ 0.78
VPS29-206ENST00000549578 ASMTP46597 345 aa19.9■□□□□ 0.78
VPS29-206ENST00000549578 FOLH1Q04609 750 aa19.9■□□□□ 0.78
VPS29-206ENST00000549578 NSDHLQ15738 373 aa19.9■□□□□ 0.78
VPS29-206ENST00000549578 SLC48A1Q6P1K1 146 aa19.9■□□□□ 0.78
VPS29-206ENST00000549578 PLPP5Q8NEB5 264 aa19.9■□□□□ 0.78
VPS29-206ENST00000549578 TANKQ92844 425 aa19.9■□□□□ 0.78
VPS29-206ENST00000549578 RILPQ96NA2 401 aa19.9■□□□□ 0.78
VPS29-206ENST00000549578 KLHL14Q9P2G3 628 aa19.9■□□□□ 0.78
VPS29-206ENST00000549578 CES1P1Q9UKY3 287 aa19.9■□□□□ 0.78
VPS29-206ENST00000549578 WBP11Q9Y2W2 641 aaKnown RBP19.9■□□□□ 0.78
VPS29-206ENST00000549578 IGKV3D-11A0A0A0MRZ8 115 aa19.89■□□□□ 0.77
VPS29-206ENST00000549578 A0A1W2PS29 197 aa19.89■□□□□ 0.77
VPS29-206ENST00000549578 TMEM8BA6NDV4 472 aa19.89■□□□□ 0.77
VPS29-206ENST00000549578 UBDO15205 165 aa19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms