RNA–Protein interactions for RNA: ENST00000549271.1

DDX54-206, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-206ENST00000549271 NCF1P14598 390 aaPredicted RBP11.32□□□□□ -0.6
DDX54-206ENST00000549271 ECHS1P30084 290 aa11.32□□□□□ -0.6
DDX54-206ENST00000549271 PEX19P40855 299 aa11.32□□□□□ -0.6
DDX54-206ENST00000549271 RFC3P40938 356 aa11.32□□□□□ -0.6
DDX54-206ENST00000549271 NR0B1P51843 470 aaKnown RBP11.32□□□□□ -0.6
DDX54-206ENST00000549271 ATP6V0D1P61421 351 aa11.32□□□□□ -0.6
DDX54-206ENST00000549271 OLR1P78380 273 aa11.32□□□□□ -0.6
DDX54-206ENST00000549271 NKX6-1P78426 367 aaPredicted RBP11.32□□□□□ -0.6
DDX54-206ENST00000549271 BTG2P78543 158 aa11.32□□□□□ -0.6
DDX54-206ENST00000549271 NAB1Q13506 487 aa11.32□□□□□ -0.6
DDX54-206ENST00000549271 DAZAP2Q15038 168 aaPredicted RBP11.32□□□□□ -0.6
DDX54-206ENST00000549271 SLC25A35Q3KQZ1 300 aa11.32□□□□□ -0.6
DDX54-206ENST00000549271 FLYWCH1Q4VC44 716 aa11.32□□□□□ -0.6
DDX54-206ENST00000549271 FBXO48Q5FWF7 155 aa11.32□□□□□ -0.6
DDX54-206ENST00000549271 CDKL4Q5MAI5 379 aa11.32□□□□□ -0.6
DDX54-206ENST00000549271 PRAMEF9Q5VWM5 478 aa11.32□□□□□ -0.6
DDX54-206ENST00000549271 FRA10AC1Q70Z53 315 aa11.32□□□□□ -0.6
DDX54-206ENST00000549271 TMPRSS11BQ86T26 416 aa11.32□□□□□ -0.6
DDX54-206ENST00000549271 ISCA2Q86U28 154 aa11.32□□□□□ -0.6
DDX54-206ENST00000549271 RELL1Q8IUW5 271 aa11.32□□□□□ -0.6
DDX54-206ENST00000549271 SULF2Q8IWU5 870 aa11.32□□□□□ -0.6
DDX54-206ENST00000549271 APCDD1LQ8NCL9 501 aa11.32□□□□□ -0.6
DDX54-206ENST00000549271 OR52N2Q8NGI0 321 aa11.32□□□□□ -0.6
DDX54-206ENST00000549271 OR10Q1Q8NGQ4 319 aa11.32□□□□□ -0.6
DDX54-206ENST00000549271 CREB3L4Q8TEY5 395 aa11.32□□□□□ -0.6
DDX54-206ENST00000549271 TMEM125Q96AQ2 219 aa11.32□□□□□ -0.6
DDX54-206ENST00000549271 AIF1LQ9BQI0 150 aa11.32□□□□□ -0.6
DDX54-206ENST00000549271 TTYH2Q9BSA4 534 aa11.32□□□□□ -0.6
DDX54-206ENST00000549271 KLHL31Q9H511 634 aa11.32□□□□□ -0.6
DDX54-206ENST00000549271 PLEKHF2Q9H8W4 249 aa11.32□□□□□ -0.6
DDX54-206ENST00000549271 NINJ2Q9NZG7 142 aa11.32□□□□□ -0.6
DDX54-206ENST00000549271 Q9UFV3 132 aa11.32□□□□□ -0.6
DDX54-206ENST00000549271 PTBP2Q9UKA9 531 aaKnown RBP11.32□□□□□ -0.6
DDX54-206ENST00000549271 KLF13Q9Y2Y9 288 aaPredicted RBP11.32□□□□□ -0.6
DDX54-206ENST00000549271 MMACHCQ9Y4U1 282 aa11.32□□□□□ -0.6
DDX54-206ENST00000549271 CUBNO60494 3623 aa11.31□□□□□ -0.6
DDX54-206ENST00000549271 KLRC4-KLRK1H3BQV0 150 aa11.31□□□□□ -0.6
DDX54-206ENST00000549271 FCHO1O14526 889 aa11.31□□□□□ -0.6
DDX54-206ENST00000549271 WDR47O94967 919 aa11.31□□□□□ -0.6
DDX54-206ENST00000549271 CTAGE8P0CG41 777 aa11.31□□□□□ -0.6
DDX54-206ENST00000549271 GLI4P10075 376 aa11.31□□□□□ -0.6
DDX54-206ENST00000549271 ACVR2AP27037 513 aa11.31□□□□□ -0.6
DDX54-206ENST00000549271 CRABP2P29373 138 aa11.31□□□□□ -0.6
DDX54-206ENST00000549271 HSPA7P48741 367 aa11.31□□□□□ -0.6
DDX54-206ENST00000549271 DCAF7P61962 342 aa11.31□□□□□ -0.6
DDX54-206ENST00000549271 GXYLT1Q4G148 440 aa11.31□□□□□ -0.6
DDX54-206ENST00000549271 SULT1C3Q6IMI6 304 aa11.31□□□□□ -0.6
DDX54-206ENST00000549271 CTAGE4Q8IX94 777 aa11.31□□□□□ -0.6
DDX54-206ENST00000549271 CYP4X1Q8N118 509 aa11.31□□□□□ -0.6
DDX54-206ENST00000549271 ZFP62Q8NB50 900 aaPredicted RBP11.31□□□□□ -0.6
DDX54-206ENST00000549271 SIMC1Q8NDZ2 872 aa11.31□□□□□ -0.6
DDX54-206ENST00000549271 MNS1Q8NEH6 495 aa11.31□□□□□ -0.6
DDX54-206ENST00000549271 ARMC2Q8NEN0 867 aa11.31□□□□□ -0.6
DDX54-206ENST00000549271 FAM222BQ8WU58 562 aa11.31□□□□□ -0.6
DDX54-206ENST00000549271 ESAMQ96AP7 390 aa11.31□□□□□ -0.6
DDX54-206ENST00000549271 MRRFQ96E11 262 aaKnown RBP11.31□□□□□ -0.6
DDX54-206ENST00000549271 NPLQ9BXD5 320 aaPredicted RBP11.31□□□□□ -0.6
DDX54-206ENST00000549271 FUT8Q9BYC5 575 aa11.31□□□□□ -0.6
DDX54-206ENST00000549271 DEFB126Q9BYW3 111 aa11.31□□□□□ -0.6
DDX54-206ENST00000549271 NECTIN3Q9NQS3 549 aa11.31□□□□□ -0.6
DDX54-206ENST00000549271 PNPLA3Q9NST1 481 aa11.31□□□□□ -0.6
DDX54-206ENST00000549271 BEX4Q9NWD9 120 aaPredicted RBP11.31□□□□□ -0.6
DDX54-206ENST00000549271 FAM215AQ9Y5M1 114 aa11.31□□□□□ -0.6
DDX54-206ENST00000549271 ARID1AO14497 2285 aa11.31□□□□□ -0.6
DDX54-206ENST00000549271 ANK2Q01484 3957 aa11.3□□□□□ -0.6
DDX54-206ENST00000549271 SYNDIG1LA6NDD5 238 aa11.3□□□□□ -0.6
DDX54-206ENST00000549271 C4orf51C9J302 202 aa11.3□□□□□ -0.6
DDX54-206ENST00000549271 KIF2AO00139 706 aaPredicted RBP11.3□□□□□ -0.6
DDX54-206ENST00000549271 PSMD12O00232 456 aaPredicted RBP11.3□□□□□ -0.6
DDX54-206ENST00000549271 SYT5O00445 386 aa11.3□□□□□ -0.6
DDX54-206ENST00000549271 PEX1O43933 1283 aa11.3□□□□□ -0.6
DDX54-206ENST00000549271 STK16O75716 305 aa11.3□□□□□ -0.6
DDX54-206ENST00000549271 PDE9AO76083 593 aa11.3□□□□□ -0.6
DDX54-206ENST00000549271 TBX6O95947 436 aaPredicted RBP11.3□□□□□ -0.6
DDX54-206ENST00000549271 SERPIND1P05546 499 aa11.3□□□□□ -0.6
DDX54-206ENST00000549271 GNAZP19086 355 aa11.3□□□□□ -0.6
DDX54-206ENST00000549271 EPORP19235 508 aa11.3□□□□□ -0.6
DDX54-206ENST00000549271 CD53P19397 219 aa11.3□□□□□ -0.6
DDX54-206ENST00000549271 MAOAP21397 527 aa11.3□□□□□ -0.6
DDX54-206ENST00000549271 GSTM2P28161 218 aa11.3□□□□□ -0.6
DDX54-206ENST00000549271 ADH7P40394 386 aa11.3□□□□□ -0.6
DDX54-206ENST00000549271 CLCN2P51788 898 aa11.3□□□□□ -0.6
DDX54-206ENST00000549271 GPR143P51810 404 aa11.3□□□□□ -0.6
DDX54-206ENST00000549271 RAB8AP61006 207 aa11.3□□□□□ -0.6
DDX54-206ENST00000549271 PPP2R2BQ00005 443 aa11.3□□□□□ -0.6
DDX54-206ENST00000549271 BMPR2Q13873 1038 aa11.3□□□□□ -0.6
DDX54-206ENST00000549271 SLMAPQ14BN4 828 aa11.3□□□□□ -0.6
DDX54-206ENST00000549271 RBBP5Q15291 538 aaKnown RBP11.3□□□□□ -0.6
DDX54-206ENST00000549271 GLE1Q53GS7 698 aaKnown RBP11.3□□□□□ -0.6
DDX54-206ENST00000549271 MROH9Q5TGP6 573 aa11.3□□□□□ -0.6
DDX54-206ENST00000549271 RTL6Q6ICC9 239 aa11.3□□□□□ -0.6
DDX54-206ENST00000549271 SCUBE1Q8IWY4 988 aa11.3□□□□□ -0.6
DDX54-206ENST00000549271 CENPLQ8N0S6 344 aaPredicted RBP11.3□□□□□ -0.6
DDX54-206ENST00000549271 CA13Q8N1Q1 262 aa11.3□□□□□ -0.6
DDX54-206ENST00000549271 TCAIMQ8N3R3 496 aa11.3□□□□□ -0.6
DDX54-206ENST00000549271 PDPRQ8NCN5 879 aa11.3□□□□□ -0.6
DDX54-206ENST00000549271 B3GNT7Q8NFL0 401 aa11.3□□□□□ -0.6
DDX54-206ENST00000549271 STAG3L4Q8TBR4 150 aa11.3□□□□□ -0.6
DDX54-206ENST00000549271 IFT81Q8WYA0 676 aa11.3□□□□□ -0.6
DDX54-206ENST00000549271 NXNL1Q96CM4 212 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 96.2 ms