RNA–Protein interactions for RNA: ENST00000548939.1

CNOT2-216, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 2

Gene CNOT2, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-216ENST00000548939 KLHL30-AS1Q8NEE0 82 aa3.02□□□□□ -1.93
CNOT2-216ENST00000548939 FGF13Q92913 245 aa3.02□□□□□ -1.93
CNOT2-216ENST00000548939 DHX58Q96C10 678 aa3.02□□□□□ -1.93
CNOT2-216ENST00000548939 ZNF707Q96C28 371 aaPredicted RBP3.02□□□□□ -1.93
CNOT2-216ENST00000548939 CNRIP1Q96F85 164 aaPredicted RBP3.02□□□□□ -1.93
CNOT2-216ENST00000548939 ZNF597Q96LX8 424 aa3.02□□□□□ -1.93
CNOT2-216ENST00000548939 LINC00167Q96N53 147 aa3.02□□□□□ -1.93
CNOT2-216ENST00000548939 MAP3K3Q99759 626 aa3.02□□□□□ -1.93
CNOT2-216ENST00000548939 NUSAP1Q9BXS6 441 aaKnown RBP3.02□□□□□ -1.93
CNOT2-216ENST00000548939 MRPL9Q9BYD2 267 aaKnown RBP3.02□□□□□ -1.93
CNOT2-216ENST00000548939 HOXD1Q9GZZ0 328 aa3.02□□□□□ -1.93
CNOT2-216ENST00000548939 NT5C3AQ9H0P0 336 aa3.02□□□□□ -1.93
CNOT2-216ENST00000548939 PRORYQ9H606 182 aa3.02□□□□□ -1.93
CNOT2-216ENST00000548939 RGS18Q9NS28 235 aa3.02□□□□□ -1.93
CNOT2-216ENST00000548939 TSPAN16Q9UKR8 245 aa3.02□□□□□ -1.93
CNOT2-216ENST00000548939 STYXL1Q9Y6J8 313 aa3.02□□□□□ -1.93
CNOT2-216ENST00000548939 ZFP37Q9Y6Q3 630 aaPredicted RBP3.02□□□□□ -1.93
CNOT2-216ENST00000548939 MGAQ8IWI9 3026 aa3.02□□□□□ -1.93
CNOT2-216ENST00000548939 KIAA1217Q5T5P2 1943 aa3.01□□□□□ -1.93
CNOT2-216ENST00000548939 CENPEQ02224 2701 aa3.01□□□□□ -1.93
CNOT2-216ENST00000548939 IGHV4-30-2A0A087WSY4 118 aa3.01□□□□□ -1.93
CNOT2-216ENST00000548939 FAM149AA5PLN7 773 aa3.01□□□□□ -1.93
CNOT2-216ENST00000548939 TRABD2BA6NFA1 517 aa3.01□□□□□ -1.93
CNOT2-216ENST00000548939 CCL16O15467 120 aa3.01□□□□□ -1.93
CNOT2-216ENST00000548939 TEX28O15482 410 aa3.01□□□□□ -1.93
CNOT2-216ENST00000548939 TSPAN1O60635 241 aa3.01□□□□□ -1.93
CNOT2-216ENST00000548939 CEACAM4O75871 244 aa3.01□□□□□ -1.93
CNOT2-216ENST00000548939 PRKAR1AP10644 381 aa3.01□□□□□ -1.93
CNOT2-216ENST00000548939 KLK2P20151 261 aa3.01□□□□□ -1.93
CNOT2-216ENST00000548939 JAK1P23458 1154 aa3.01□□□□□ -1.93
CNOT2-216ENST00000548939 ZBTB25P24278 435 aa3.01□□□□□ -1.93
CNOT2-216ENST00000548939 GDI1P31150 447 aa3.01□□□□□ -1.93
CNOT2-216ENST00000548939 TDO2P48775 406 aa3.01□□□□□ -1.93
CNOT2-216ENST00000548939 ARSEP51690 589 aa3.01□□□□□ -1.93
CNOT2-216ENST00000548939 SEMG2Q02383 582 aa3.01□□□□□ -1.93
CNOT2-216ENST00000548939 CDH18Q13634 790 aa3.01□□□□□ -1.93
CNOT2-216ENST00000548939 MAPK6Q16659 721 aa3.01□□□□□ -1.93
CNOT2-216ENST00000548939 CLLU1OSQ5K130 101 aa3.01□□□□□ -1.93
CNOT2-216ENST00000548939 FHL5Q5TD97 284 aa3.01□□□□□ -1.93
CNOT2-216ENST00000548939 TMED8Q6PL24 325 aaPredicted RBP3.01□□□□□ -1.93
CNOT2-216ENST00000548939 LCLAT1Q6UWP7 414 aa3.01□□□□□ -1.93
CNOT2-216ENST00000548939 RAPH1Q70E73 1250 aa3.01□□□□□ -1.93
CNOT2-216ENST00000548939 ZER1Q7Z7L7 766 aa3.01□□□□□ -1.93
CNOT2-216ENST00000548939 ITFG1Q8TB96 612 aa3.01□□□□□ -1.93
CNOT2-216ENST00000548939 OVOL2Q9BRP0 275 aa3.01□□□□□ -1.93
CNOT2-216ENST00000548939 CHCHD5Q9BSY4 110 aa3.01□□□□□ -1.93
CNOT2-216ENST00000548939 PLA2G2FQ9BZM2 168 aa3.01□□□□□ -1.93
CNOT2-216ENST00000548939 PXMP2Q9NR77 195 aa3.01□□□□□ -1.93
CNOT2-216ENST00000548939 GKN1Q9NS71 199 aa3.01□□□□□ -1.93
CNOT2-216ENST00000548939 POMT2Q9UKY4 750 aa3.01□□□□□ -1.93
CNOT2-216ENST00000548939 VSIG4Q9Y279 399 aa3.01□□□□□ -1.93
CNOT2-216ENST00000548939 LOXHD1Q8IVV2 1947 aa3.01□□□□□ -1.93
CNOT2-216ENST00000548939 SPTBN1Q01082 2364 aaKnown RBP3□□□□□ -1.93
CNOT2-216ENST00000548939 USP9YO00507 2555 aaPredicted RBP3□□□□□ -1.93
CNOT2-216ENST00000548939 ZNF840PA6NDX5 716 aa3□□□□□ -1.93
CNOT2-216ENST00000548939 ANKUB1A6NFN9 424 aa3□□□□□ -1.93
CNOT2-216ENST00000548939 TSPY2A6NKD2 308 aa3□□□□□ -1.93
CNOT2-216ENST00000548939 ZNF263O14978 683 aa3□□□□□ -1.93
CNOT2-216ENST00000548939 SH3BP5O60239 455 aa3□□□□□ -1.93
CNOT2-216ENST00000548939 NMT2O60551 498 aa3□□□□□ -1.93
CNOT2-216ENST00000548939 ECI2O75521 394 aa3□□□□□ -1.93
CNOT2-216ENST00000548939 SURF6O75683 361 aaKnown RBP3□□□□□ -1.93
CNOT2-216ENST00000548939 ZWINTO95229 277 aa3□□□□□ -1.93
CNOT2-216ENST00000548939 OR2T7P0C7T2 308 aa3□□□□□ -1.93
CNOT2-216ENST00000548939 HSPD1P10809 573 aaKnown RBP3□□□□□ -1.93
CNOT2-216ENST00000548939 RPL35AP18077 110 aaKnown RBP3□□□□□ -1.93
CNOT2-216ENST00000548939 CHMP24386 653 aa3□□□□□ -1.93
CNOT2-216ENST00000548939 CCND2P30279 289 aa3□□□□□ -1.93
CNOT2-216ENST00000548939 TCF7P36402 384 aaPredicted RBP3□□□□□ -1.93
CNOT2-216ENST00000548939 SLC11A1P49279 550 aa3□□□□□ -1.93
CNOT2-216ENST00000548939 HLCSP50747 726 aa3□□□□□ -1.93
CNOT2-216ENST00000548939 CCDC173Q0VFZ6 552 aa3□□□□□ -1.93
CNOT2-216ENST00000548939 CAPRIN1Q14444 709 aaKnown RBP3□□□□□ -1.93
CNOT2-216ENST00000548939 KARSQ15046 597 aaKnown RBP3□□□□□ -1.93
CNOT2-216ENST00000548939 PON2Q15165 354 aa3□□□□□ -1.93
CNOT2-216ENST00000548939 TAB1Q15750 504 aa3□□□□□ -1.93
CNOT2-216ENST00000548939 C3AR1Q16581 482 aa3□□□□□ -1.93
CNOT2-216ENST00000548939 MS4A18Q3C1V0 323 aa3□□□□□ -1.93
CNOT2-216ENST00000548939 PPM1LQ5SGD2 360 aa3□□□□□ -1.93
CNOT2-216ENST00000548939 MARCH8Q5T0T0 291 aa3□□□□□ -1.93
CNOT2-216ENST00000548939 LIN9Q5TKA1 542 aa3□□□□□ -1.93
CNOT2-216ENST00000548939 TIPARPQ7Z3E1 657 aaKnown RBP3□□□□□ -1.93
CNOT2-216ENST00000548939 ECHDC2Q86YB7 292 aa3□□□□□ -1.93
CNOT2-216ENST00000548939 C9orf43Q8TAL5 461 aaPredicted RBP3□□□□□ -1.93
CNOT2-216ENST00000548939 SETD7Q8WTS6 366 aaKnown RBP3□□□□□ -1.93
CNOT2-216ENST00000548939 DNASE1L2Q92874 299 aa3□□□□□ -1.93
CNOT2-216ENST00000548939 LPAR4Q99677 370 aa3□□□□□ -1.93
CNOT2-216ENST00000548939 KIFC3Q9BVG8 833 aa3□□□□□ -1.93
CNOT2-216ENST00000548939 APOL6Q9BWW8 343 aa3□□□□□ -1.93
CNOT2-216ENST00000548939 SLC26A6Q9BXS9 759 aa3□□□□□ -1.93
CNOT2-216ENST00000548939 ITPAQ9BY32 194 aa3□□□□□ -1.93
CNOT2-216ENST00000548939 PARLQ9H300 379 aa3□□□□□ -1.93
CNOT2-216ENST00000548939 TRPV4Q9HBA0 871 aa3□□□□□ -1.93
CNOT2-216ENST00000548939 GTSE1Q9NYZ3 720 aa3□□□□□ -1.93
CNOT2-216ENST00000548939 THAP10Q9P2Z0 257 aaPredicted RBP3□□□□□ -1.93
CNOT2-216ENST00000548939 ORC3Q9UBD5 711 aaPredicted RBP3□□□□□ -1.93
CNOT2-216ENST00000548939 ZNF148Q9UQR1 794 aa3□□□□□ -1.93
CNOT2-216ENST00000548939 PRG3Q9Y2Y8 225 aaPredicted RBP3□□□□□ -1.93
CNOT2-216ENST00000548939 GON4LQ3T8J9 2241 aa3□□□□□ -1.93
CNOT2-216ENST00000548939 ITPR2Q14571 2701 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms