RNA–Protein interactions for RNA: ENST00000548786.1

DDX54-205, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-205ENST00000548786 UCN3Q969E3 161 aa14.73□□□□□ -0.05
DDX54-205ENST00000548786 ANKRD9Q96BM1 317 aaPredicted RBP14.73□□□□□ -0.05
DDX54-205ENST00000548786 SIGLEC12Q96PQ1 595 aa14.73□□□□□ -0.05
DDX54-205ENST00000548786 SERPINI1Q99574 410 aa14.73□□□□□ -0.05
DDX54-205ENST00000548786 UTP23Q9BRU9 249 aaKnown RBP14.73□□□□□ -0.05
DDX54-205ENST00000548786 C1QTNF3Q9BXJ4 246 aa14.73□□□□□ -0.05
DDX54-205ENST00000548786 OR8D2Q9GZM6 311 aa14.73□□□□□ -0.05
DDX54-205ENST00000548786 RPF2Q9H7B2 306 aaKnown RBP14.73□□□□□ -0.05
DDX54-205ENST00000548786 LIN28AQ9H9Z2 209 aaKnown RBP14.73□□□□□ -0.05
DDX54-205ENST00000548786 ADAP2Q9NPF8 381 aa14.73□□□□□ -0.05
DDX54-205ENST00000548786 PHF11Q9UIL8 331 aa14.73□□□□□ -0.05
DDX54-205ENST00000548786 ZNF225Q9UK10 706 aa14.73□□□□□ -0.05
DDX54-205ENST00000548786 ZNF223Q9UK11 482 aaPredicted RBP14.73□□□□□ -0.05
DDX54-205ENST00000548786 CLCA3PQ9Y6N3 262 aa14.73□□□□□ -0.05
DDX54-205ENST00000548786 LRRK2Q5S007 2527 aa14.73□□□□□ -0.05
DDX54-205ENST00000548786 FLNBO75369 2602 aaKnown RBP14.73□□□□□ -0.05
DDX54-205ENST00000548786 ASH1LQ9NR48 2969 aaKnown RBP14.73□□□□□ -0.05
DDX54-205ENST00000548786 HECTD1Q9ULT8 2610 aa14.72□□□□□ -0.05
DDX54-205ENST00000548786 UTP20O75691 2785 aaKnown RBP14.72□□□□□ -0.05
DDX54-205ENST00000548786 A0A0A6YYD5 115 aa14.72□□□□□ -0.05
DDX54-205ENST00000548786 C17orf105B2RV13 164 aa14.72□□□□□ -0.05
DDX54-205ENST00000548786 G3V2L1 256 aa14.72□□□□□ -0.05
DDX54-205ENST00000548786 COPEO14579 308 aa14.72□□□□□ -0.05
DDX54-205ENST00000548786 PRAMEF2O60811 474 aa14.72□□□□□ -0.05
DDX54-205ENST00000548786 CDH16O75309 829 aa14.72□□□□□ -0.05
DDX54-205ENST00000548786 PROCP04070 461 aa14.72□□□□□ -0.05
DDX54-205ENST00000548786 KLK1P06870 262 aa14.72□□□□□ -0.05
DDX54-205ENST00000548786 FAM58BPP0C7Q3 252 aa14.72□□□□□ -0.05
DDX54-205ENST00000548786 IMPDH1P20839 514 aa14.72□□□□□ -0.05
DDX54-205ENST00000548786 CD96P40200 585 aa14.72□□□□□ -0.05
DDX54-205ENST00000548786 PRKAA2P54646 552 aa14.72□□□□□ -0.05
DDX54-205ENST00000548786 FOLH1Q04609 750 aa14.72□□□□□ -0.05
DDX54-205ENST00000548786 OR1C1Q15619 314 aa14.72□□□□□ -0.05
DDX54-205ENST00000548786 ELAVL1Q15717 326 aaKnown RBP14.72□□□□□ -0.05
DDX54-205ENST00000548786 GGTA1PQ4G0N0 100 aa14.72□□□□□ -0.05
DDX54-205ENST00000548786 ZNF468Q5VIY5 522 aaPredicted RBP14.72□□□□□ -0.05
DDX54-205ENST00000548786 SPINK14Q6IE38 97 aa14.72□□□□□ -0.05
DDX54-205ENST00000548786 ZYG11AQ6WRX3 759 aa14.72□□□□□ -0.05
DDX54-205ENST00000548786 SH2D5Q6ZV89 423 aa14.72□□□□□ -0.05
DDX54-205ENST00000548786 GPRIN3Q6ZVF9 776 aa14.72□□□□□ -0.05
DDX54-205ENST00000548786 SLC22A9Q8IVM8 553 aa14.72□□□□□ -0.05
DDX54-205ENST00000548786 ZCCHC7Q8N3Z6 543 aaKnown RBP14.72□□□□□ -0.05
DDX54-205ENST00000548786 APCDD1LQ8NCL9 501 aa14.72□□□□□ -0.05
DDX54-205ENST00000548786 PRR7Q8TB68 274 aa14.72□□□□□ -0.05
DDX54-205ENST00000548786 PPWD1Q96BP3 646 aaKnown RBP14.72□□□□□ -0.05
DDX54-205ENST00000548786 KCNA7Q96RP8 456 aa14.72□□□□□ -0.05
DDX54-205ENST00000548786 RNF32Q9H0A6 362 aa14.72□□□□□ -0.05
DDX54-205ENST00000548786 AGPAT4Q9NRZ5 378 aa14.72□□□□□ -0.05
DDX54-205ENST00000548786 TEX10Q9NXF1 929 aaPredicted RBP14.72□□□□□ -0.05
DDX54-205ENST00000548786 SNX6Q9UNH7 406 aa14.72□□□□□ -0.05
DDX54-205ENST00000548786 ASB4Q9Y574 426 aa14.72□□□□□ -0.05
DDX54-205ENST00000548786 USP9XQ93008 2570 aaPredicted RBP14.71□□□□□ -0.05
DDX54-205ENST00000548786 A0A1W2PR48 441 aa14.71□□□□□ -0.05
DDX54-205ENST00000548786 MANBAO00462 879 aa14.71□□□□□ -0.05
DDX54-205ENST00000548786 PRKNO60260 465 aaPredicted RBP14.71□□□□□ -0.05
DDX54-205ENST00000548786 PLIN3O60664 434 aa14.71□□□□□ -0.05
DDX54-205ENST00000548786 AIFM1O95831 613 aa14.71□□□□□ -0.05
DDX54-205ENST00000548786 NR2F6P10588 404 aa14.71□□□□□ -0.05
DDX54-205ENST00000548786 TLX1P31314 330 aaPredicted RBP14.71□□□□□ -0.05
DDX54-205ENST00000548786 BUD31P41223 144 aaPredicted RBP14.71□□□□□ -0.05
DDX54-205ENST00000548786 HTR6P50406 440 aa14.71□□□□□ -0.05
DDX54-205ENST00000548786 CLCN2P51788 898 aa14.71□□□□□ -0.05
DDX54-205ENST00000548786 RASA2Q15283 850 aa14.71□□□□□ -0.05
DDX54-205ENST00000548786 ZNF766Q5HY98 468 aa14.71□□□□□ -0.05
DDX54-205ENST00000548786 SCIMPQ6UWF3 145 aa14.71□□□□□ -0.05
DDX54-205ENST00000548786 DGAT2L6Q6ZPD8 337 aa14.71□□□□□ -0.05
DDX54-205ENST00000548786 TMEM132CQ8N3T6 1108 aa14.71□□□□□ -0.05
DDX54-205ENST00000548786 PTPMT1Q8WUK0 201 aaPredicted RBP14.71□□□□□ -0.05
DDX54-205ENST00000548786 L3HYPDHQ96EM0 354 aa14.71□□□□□ -0.05
DDX54-205ENST00000548786 VMP1Q96GC9 406 aa14.71□□□□□ -0.05
DDX54-205ENST00000548786 DGAT2Q96PD7 388 aa14.71□□□□□ -0.05
DDX54-205ENST00000548786 TAAR6Q96RI8 345 aa14.71□□□□□ -0.05
DDX54-205ENST00000548786 ZNF382Q96SR6 550 aa14.71□□□□□ -0.05
DDX54-205ENST00000548786 PARD6BQ9BYG5 372 aa14.71□□□□□ -0.05
DDX54-205ENST00000548786 SHCBP1LQ9BZQ2 653 aa14.71□□□□□ -0.05
DDX54-205ENST00000548786 GSTO2Q9H4Y5 243 aa14.71□□□□□ -0.05
DDX54-205ENST00000548786 DDX31Q9H8H2 851 aaKnown RBP14.71□□□□□ -0.05
DDX54-205ENST00000548786 PPCSQ9HAB8 311 aa14.71□□□□□ -0.05
DDX54-205ENST00000548786 LYARQ9NX58 379 aaKnown RBP14.71□□□□□ -0.05
DDX54-205ENST00000548786 TRPS1Q9UHF7 1281 aa14.71□□□□□ -0.05
DDX54-205ENST00000548786 TIMM22Q9Y584 194 aa14.71□□□□□ -0.05
DDX54-205ENST00000548786 ANKUB1A6NFN9 424 aa14.7□□□□□ -0.06
DDX54-205ENST00000548786 PROM1O43490 865 aa14.7□□□□□ -0.06
DDX54-205ENST00000548786 SEMA3DO95025 777 aa14.7□□□□□ -0.06
DDX54-205ENST00000548786 CHN1P15882 459 aa14.7□□□□□ -0.06
DDX54-205ENST00000548786 HMOX2P30519 316 aa14.7□□□□□ -0.06
DDX54-205ENST00000548786 CRHR1P34998 444 aa14.7□□□□□ -0.06
DDX54-205ENST00000548786 CCT5P48643 541 aa14.7□□□□□ -0.06
DDX54-205ENST00000548786 MLF1P58340 268 aa14.7□□□□□ -0.06
DDX54-205ENST00000548786 SRSF1Q07955 248 aaKnown RBP eCLIP14.7□□□□□ -0.06
DDX54-205ENST00000548786 LCP2Q13094 533 aa14.7□□□□□ -0.06
DDX54-205ENST00000548786 SERTAD2Q14140 314 aa14.7□□□□□ -0.06
DDX54-205ENST00000548786 TERF2Q15554 542 aa14.7□□□□□ -0.06
DDX54-205ENST00000548786 CCNYL2Q5T2Q4 361 aa14.7□□□□□ -0.06
DDX54-205ENST00000548786 MRM1Q6IN84 353 aaKnown RBP14.7□□□□□ -0.06
DDX54-205ENST00000548786 WDR93Q6P2C0 686 aa14.7□□□□□ -0.06
DDX54-205ENST00000548786 EMBQ6PCB8 327 aa14.7□□□□□ -0.06
DDX54-205ENST00000548786 COMMD6Q7Z4G1 85 aa14.7□□□□□ -0.06
DDX54-205ENST00000548786 SRRM1Q8IYB3 904 aaKnown RBP14.7□□□□□ -0.06
DDX54-205ENST00000548786 MMP21Q8N119 569 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms