RNA–Protein interactions for RNA: ENST00000548539.1

VPS29-205, Transcript of VPS29, retromer complex component, humanhuman

TSL 3

Gene VPS29, Length 598 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-205ENST00000548539 DCAF12Q5T6F0 453 aa3.49□□□□□ -1.85
VPS29-205ENST00000548539 ZNF730Q6ZMV8 503 aa3.49□□□□□ -1.85
VPS29-205ENST00000548539 KIF6Q6ZMV9 814 aa3.49□□□□□ -1.85
VPS29-205ENST00000548539 BNIPLQ7Z465 357 aa3.49□□□□□ -1.85
VPS29-205ENST00000548539 AQP11Q8NBQ7 271 aa3.49□□□□□ -1.85
VPS29-205ENST00000548539 RELL2Q8NC24 303 aaPredicted RBP3.49□□□□□ -1.85
VPS29-205ENST00000548539 LEMD2Q8NC56 503 aa3.49□□□□□ -1.85
VPS29-205ENST00000548539 HCAR2Q8TDS4 363 aa3.49□□□□□ -1.85
VPS29-205ENST00000548539 LIPHQ8WWY8 451 aa3.49□□□□□ -1.85
VPS29-205ENST00000548539 ESAMQ96AP7 390 aa3.49□□□□□ -1.85
VPS29-205ENST00000548539 ATXN7L3BQ96GX2 97 aa3.49□□□□□ -1.85
VPS29-205ENST00000548539 NSMCE2Q96MF7 247 aa3.49□□□□□ -1.85
VPS29-205ENST00000548539 S1PR3Q99500 378 aa3.49□□□□□ -1.85
VPS29-205ENST00000548539 JPH2Q9BR39 696 aaPredicted RBP3.49□□□□□ -1.85
VPS29-205ENST00000548539 OVOL2Q9BRP0 275 aa3.49□□□□□ -1.85
VPS29-205ENST00000548539 RBM4Q9BWF3 364 aaKnown RBP3.49□□□□□ -1.85
VPS29-205ENST00000548539 BARHL1Q9BZE3 327 aa3.49□□□□□ -1.85
VPS29-205ENST00000548539 KRT23Q9C075 422 aa3.49□□□□□ -1.85
VPS29-205ENST00000548539 C1orf21Q9H246 121 aa3.49□□□□□ -1.85
VPS29-205ENST00000548539 MED20Q9H944 212 aa3.49□□□□□ -1.85
VPS29-205ENST00000548539 PLEKHA3Q9HB20 300 aa3.49□□□□□ -1.85
VPS29-205ENST00000548539 ACOXLQ9NUZ1 547 aa3.49□□□□□ -1.85
VPS29-205ENST00000548539 TECRQ9NZ01 308 aaKnown RBP3.49□□□□□ -1.85
VPS29-205ENST00000548539 TRIM10Q9UDY6 481 aa3.49□□□□□ -1.85
VPS29-205ENST00000548539 DNPEPQ9ULA0 475 aa3.49□□□□□ -1.85
VPS29-205ENST00000548539 EXOGQ9Y2C4 368 aaKnown RBP3.49□□□□□ -1.85
VPS29-205ENST00000548539 ZHX2Q9Y6X8 837 aa3.49□□□□□ -1.85
VPS29-205ENST00000548539 A0A0U1RRA0 63 aa3.48□□□□□ -1.85
VPS29-205ENST00000548539 C19orf81C9J6K1 198 aa3.48□□□□□ -1.85
VPS29-205ENST00000548539 K7EQD1 137 aa3.48□□□□□ -1.85
VPS29-205ENST00000548539 PRPSAP2O60256 369 aa3.48□□□□□ -1.85
VPS29-205ENST00000548539 CEACAM4O75871 244 aa3.48□□□□□ -1.85
VPS29-205ENST00000548539 ANXA9O76027 345 aa3.48□□□□□ -1.85
VPS29-205ENST00000548539 ZFAND5O76080 213 aa3.48□□□□□ -1.85
VPS29-205ENST00000548539 FGF19O95750 216 aa3.48□□□□□ -1.85
VPS29-205ENST00000548539 TXNDC12O95881 172 aa3.48□□□□□ -1.85
VPS29-205ENST00000548539 MT-ATP6P00846 226 aa3.48□□□□□ -1.85
VPS29-205ENST00000548539 TGFAP01135 160 aa3.48□□□□□ -1.85
VPS29-205ENST00000548539 CT45A8P0DMV1 189 aa3.48□□□□□ -1.85
VPS29-205ENST00000548539 CT45A9P0DMV2 189 aa3.48□□□□□ -1.85
VPS29-205ENST00000548539 MYOGP15173 224 aa3.48□□□□□ -1.85
VPS29-205ENST00000548539 GLRA1P23415 457 aa3.48□□□□□ -1.85
VPS29-205ENST00000548539 AKT2P31751 481 aa3.48□□□□□ -1.85
VPS29-205ENST00000548539 FHITP49789 147 aa3.48□□□□□ -1.85
VPS29-205ENST00000548539 CCR4P51679 360 aa3.48□□□□□ -1.85
VPS29-205ENST00000548539 LIMK2P53671 638 aa3.48□□□□□ -1.85
VPS29-205ENST00000548539 ATXN3P54252 364 aaPredicted RBP3.48□□□□□ -1.85
VPS29-205ENST00000548539 NLRP11P59045 1033 aaKnown RBP3.48□□□□□ -1.85
VPS29-205ENST00000548539 CYCSP99999 105 aaKnown RBP3.48□□□□□ -1.85
VPS29-205ENST00000548539 RBBP4Q09028 425 aa3.48□□□□□ -1.85
VPS29-205ENST00000548539 GCKRQ14397 625 aa3.48□□□□□ -1.85
VPS29-205ENST00000548539 OR1C1Q15619 314 aa3.48□□□□□ -1.85
VPS29-205ENST00000548539 TRADDQ15628 312 aa3.48□□□□□ -1.85
VPS29-205ENST00000548539 RFTN2Q52LD8 501 aaPredicted RBP3.48□□□□□ -1.85
VPS29-205ENST00000548539 CT45A2Q5DJT8 189 aa3.48□□□□□ -1.85
VPS29-205ENST00000548539 NKAIN2Q5VXU1 208 aa3.48□□□□□ -1.85
VPS29-205ENST00000548539 RTL6Q6ICC9 239 aa3.48□□□□□ -1.85
VPS29-205ENST00000548539 NEPROQ6NW34 567 aa3.48□□□□□ -1.85
VPS29-205ENST00000548539 ZCCHC12Q6PEW1 402 aa3.48□□□□□ -1.85
VPS29-205ENST00000548539 FRRS1Q6ZNA5 592 aa3.48□□□□□ -1.85
VPS29-205ENST00000548539 TAF8Q7Z7C8 310 aa3.48□□□□□ -1.85
VPS29-205ENST00000548539 PARP8Q8N3A8 854 aa3.48□□□□□ -1.85
VPS29-205ENST00000548539 NUP37Q8NFH4 326 aa3.48□□□□□ -1.85
VPS29-205ENST00000548539 OR52B6Q8NGF0 335 aa3.48□□□□□ -1.85
VPS29-205ENST00000548539 OR6M1Q8NGM8 313 aa3.48□□□□□ -1.85
VPS29-205ENST00000548539 C8orf46Q8TAG6 207 aa3.48□□□□□ -1.85
VPS29-205ENST00000548539 MRPL24Q96A35 216 aaKnown RBP3.48□□□□□ -1.85
VPS29-205ENST00000548539 RPGRIP1Q96KN7 1286 aa3.48□□□□□ -1.85
VPS29-205ENST00000548539 FAM111AQ96PZ2 611 aa3.48□□□□□ -1.85
VPS29-205ENST00000548539 KRT12Q99456 494 aa3.48□□□□□ -1.85
VPS29-205ENST00000548539 SIRPDQ9H106 197 aa3.48□□□□□ -1.85
VPS29-205ENST00000548539 TRPV6Q9H1D0 765 aa3.48□□□□□ -1.85
VPS29-205ENST00000548539 SLC26A1Q9H2B4 701 aa3.48□□□□□ -1.85
VPS29-205ENST00000548539 GANQ9H2C0 597 aa3.48□□□□□ -1.85
VPS29-205ENST00000548539 IL1RAPQ9NPH3 570 aa3.48□□□□□ -1.85
VPS29-205ENST00000548539 TEX10Q9NXF1 929 aaPredicted RBP3.48□□□□□ -1.85
VPS29-205ENST00000548539 KCNN3Q9UGI6 736 aa3.48□□□□□ -1.85
VPS29-205ENST00000548539 HOOK1Q9UJC3 728 aaKnown RBP3.48□□□□□ -1.85
VPS29-205ENST00000548539 ISY1Q9ULR0 285 aaKnown RBP3.48□□□□□ -1.85
VPS29-205ENST00000548539 PIN4Q9Y237 131 aaKnown RBP3.48□□□□□ -1.85
VPS29-205ENST00000548539 KIF7Q2M1P5 1343 aa3.47□□□□□ -1.85
VPS29-205ENST00000548539 UMODL1Q5DID0 1318 aa3.47□□□□□ -1.85
VPS29-205ENST00000548539 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP3.47□□□□□ -1.85
VPS29-205ENST00000548539 TMEM89A2RUT3 159 aa3.47□□□□□ -1.85
VPS29-205ENST00000548539 OR5H15A6NDH6 313 aa3.47□□□□□ -1.85
VPS29-205ENST00000548539 TMCO5BA8MYB1 307 aa3.47□□□□□ -1.85
VPS29-205ENST00000548539 ZNF749O43361 778 aa3.47□□□□□ -1.85
VPS29-205ENST00000548539 LRP3O75074 770 aa3.47□□□□□ -1.85
VPS29-205ENST00000548539 PGK2P07205 417 aa3.47□□□□□ -1.85
VPS29-205ENST00000548539 KRT5P13647 590 aa3.47□□□□□ -1.85
VPS29-205ENST00000548539 CD1DP15813 335 aa3.47□□□□□ -1.85
VPS29-205ENST00000548539 RPA1P27694 616 aa3.47□□□□□ -1.85
VPS29-205ENST00000548539 PRDX6P30041 224 aa3.47□□□□□ -1.85
VPS29-205ENST00000548539 TNFRSF4P43489 277 aa3.47□□□□□ -1.85
VPS29-205ENST00000548539 CAMLGP49069 296 aa3.47□□□□□ -1.85
VPS29-205ENST00000548539 ABCE1P61221 599 aaKnown RBP3.47□□□□□ -1.85
VPS29-205ENST00000548539 CCZ1BP86790 482 aa3.47□□□□□ -1.85
VPS29-205ENST00000548539 CCZ1P86791 482 aaPredicted RBP3.47□□□□□ -1.85
VPS29-205ENST00000548539 MFGE8Q08431 387 aaPredicted RBP3.47□□□□□ -1.85
VPS29-205ENST00000548539 ZNF177Q13360 481 aaPredicted RBP3.47□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms