RNA–Protein interactions for RNA: ENST00000547063.5

TRAFD1-203, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

TSL 3

Gene TRAFD1, Length 867 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-203ENST00000547063 ZNF282Q9UDV7 671 aaPredicted RBP14.94□□□□□ -0.02
TRAFD1-203ENST00000547063 UTS2RQ9UKP6 389 aa14.94□□□□□ -0.02
TRAFD1-203ENST00000547063 SATB2Q9UPW6 733 aa14.94□□□□□ -0.02
TRAFD1-203ENST00000547063 EXO1Q9UQ84 846 aaKnown RBP14.94□□□□□ -0.02
TRAFD1-203ENST00000547063 ENTPD4Q9Y227 616 aa14.94□□□□□ -0.02
TRAFD1-203ENST00000547063 ZNF780BQ9Y6R6 833 aa14.94□□□□□ -0.02
TRAFD1-203ENST00000547063 MAU2Q9Y6X3 613 aa14.94□□□□□ -0.02
TRAFD1-203ENST00000547063 KNTC1P50748 2209 aa14.94□□□□□ -0.02
TRAFD1-203ENST00000547063 CEP250Q9BV73 2442 aa14.93□□□□□ -0.02
TRAFD1-203ENST00000547063 PRSS51A0A1B0GVH4 220 aa14.93□□□□□ -0.02
TRAFD1-203ENST00000547063 MEN1O00255 615 aa14.93□□□□□ -0.02
TRAFD1-203ENST00000547063 PDPK1O15530 556 aa14.93□□□□□ -0.02
TRAFD1-203ENST00000547063 NPPAP01160 153 aa14.93□□□□□ -0.02
TRAFD1-203ENST00000547063 ALBP02768 609 aa14.93□□□□□ -0.02
TRAFD1-203ENST00000547063 FHP07954 510 aa14.93□□□□□ -0.02
TRAFD1-203ENST00000547063 CD63P08962 238 aa14.93□□□□□ -0.02
TRAFD1-203ENST00000547063 NTSP30990 170 aa14.93□□□□□ -0.02
TRAFD1-203ENST00000547063 RORAP35398 523 aa14.93□□□□□ -0.02
TRAFD1-203ENST00000547063 ETV5P41161 510 aa14.93□□□□□ -0.02
TRAFD1-203ENST00000547063 XCR1P46094 333 aa14.93□□□□□ -0.02
TRAFD1-203ENST00000547063 OR1D4P47884 311 aa14.93□□□□□ -0.02
TRAFD1-203ENST00000547063 ZFP36L2P47974 494 aaKnown RBP14.93□□□□□ -0.02
TRAFD1-203ENST00000547063 HSD17B7P56937 341 aa14.93□□□□□ -0.02
TRAFD1-203ENST00000547063 OCA2Q04671 838 aa14.93□□□□□ -0.02
TRAFD1-203ENST00000547063 VPS26BQ4G0F5 336 aa14.93□□□□□ -0.02
TRAFD1-203ENST00000547063 C18orf63Q68DL7 685 aa14.93□□□□□ -0.02
TRAFD1-203ENST00000547063 FOXR1Q6PIV2 292 aa14.93□□□□□ -0.02
TRAFD1-203ENST00000547063 YTHDF3Q7Z739 585 aaKnown RBP14.93□□□□□ -0.02
TRAFD1-203ENST00000547063 POU5F2Q8N7G0 328 aa14.93□□□□□ -0.02
TRAFD1-203ENST00000547063 FAM47BQ8NA70 645 aa14.93□□□□□ -0.02
TRAFD1-203ENST00000547063 OR4K14Q8NGD5 310 aa14.93□□□□□ -0.02
TRAFD1-203ENST00000547063 ZFP28Q8NHY6 868 aa14.93□□□□□ -0.02
TRAFD1-203ENST00000547063 FKBP10Q96AY3 582 aa14.93□□□□□ -0.02
TRAFD1-203ENST00000547063 KLHL29Q96CT2 875 aa14.93□□□□□ -0.02
TRAFD1-203ENST00000547063 ZBED6CLQ96FA7 236 aaPredicted RBP14.93□□□□□ -0.02
TRAFD1-203ENST00000547063 PEX11GQ96HA9 241 aa14.93□□□□□ -0.02
TRAFD1-203ENST00000547063 ITCHQ96J02 903 aa14.93□□□□□ -0.02
TRAFD1-203ENST00000547063 POLR1BQ9H9Y6 1135 aa14.93□□□□□ -0.02
TRAFD1-203ENST00000547063 SLC35C2Q9NQQ7 365 aa14.93□□□□□ -0.02
TRAFD1-203ENST00000547063 C14orf105Q9NVL8 296 aa14.93□□□□□ -0.02
TRAFD1-203ENST00000547063 NDE1Q9NXR1 346 aa14.93□□□□□ -0.02
TRAFD1-203ENST00000547063 PCDHGB4Q9UN71 923 aa14.93□□□□□ -0.02
TRAFD1-203ENST00000547063 B3GALT1Q9Y5Z6 326 aa14.93□□□□□ -0.02
TRAFD1-203ENST00000547063 SEC16AO15027 2179 aa14.92□□□□□ -0.02
TRAFD1-203ENST00000547063 CNOT1A5YKK6 2376 aaKnown RBP14.92□□□□□ -0.02
TRAFD1-203ENST00000547063 C9J4A7 227 aa14.92□□□□□ -0.02
TRAFD1-203ENST00000547063 C9JVG2 144 aa14.92□□□□□ -0.02
TRAFD1-203ENST00000547063 RNASET2O00584 256 aaKnown RBP14.92□□□□□ -0.02
TRAFD1-203ENST00000547063 LAMP1P11279 417 aa14.92□□□□□ -0.02
TRAFD1-203ENST00000547063 CAPN3P20807 821 aa14.92□□□□□ -0.02
TRAFD1-203ENST00000547063 DGKQP52824 942 aa14.92□□□□□ -0.02
TRAFD1-203ENST00000547063 MAT1AQ00266 395 aaKnown RBP14.92□□□□□ -0.02
TRAFD1-203ENST00000547063 BNIP1Q12981 228 aa14.92□□□□□ -0.02
TRAFD1-203ENST00000547063 ZNF385CQ66K41 422 aaPredicted RBP14.92□□□□□ -0.02
TRAFD1-203ENST00000547063 OR4F3Q6IEY1 312 aa14.92□□□□□ -0.02
TRAFD1-203ENST00000547063 RIPOR1Q6ZS17 1223 aa14.92□□□□□ -0.02
TRAFD1-203ENST00000547063 SLC38A9Q8NBW4 561 aa14.92□□□□□ -0.02
TRAFD1-203ENST00000547063 DNAJB14Q8TBM8 379 aa14.92□□□□□ -0.02
TRAFD1-203ENST00000547063 VPS33AQ96AX1 596 aa14.92□□□□□ -0.02
TRAFD1-203ENST00000547063 EXOSC8Q96B26 276 aaKnown RBP14.92□□□□□ -0.02
TRAFD1-203ENST00000547063 ROPN1LQ96C74 230 aa14.92□□□□□ -0.02
TRAFD1-203ENST00000547063 BBS4Q96RK4 519 aa14.92□□□□□ -0.02
TRAFD1-203ENST00000547063 TGIF2Q9GZN2 237 aa14.92□□□□□ -0.02
TRAFD1-203ENST00000547063 SLC52A3Q9NQ40 469 aa14.92□□□□□ -0.02
TRAFD1-203ENST00000547063 ACSS1Q9NUB1 689 aaPredicted RBP14.92□□□□□ -0.02
TRAFD1-203ENST00000547063 GID8Q9NWU2 228 aa14.92□□□□□ -0.02
TRAFD1-203ENST00000547063 DLL3Q9NYJ7 618 aa14.92□□□□□ -0.02
TRAFD1-203ENST00000547063 IFT80Q9P2H3 777 aaPredicted RBP14.92□□□□□ -0.02
TRAFD1-203ENST00000547063 GPN3Q9UHW5 284 aaPredicted RBP14.92□□□□□ -0.02
TRAFD1-203ENST00000547063 BTNL2Q9UIR0 455 aa14.92□□□□□ -0.02
TRAFD1-203ENST00000547063 NXT1Q9UKK6 140 aaKnown RBP14.92□□□□□ -0.02
TRAFD1-203ENST00000547063 CES1P1Q9UKY3 287 aa14.92□□□□□ -0.02
TRAFD1-203ENST00000547063 MMACHCQ9Y4U1 282 aa14.92□□□□□ -0.02
TRAFD1-203ENST00000547063 TMEM184BQ9Y519 407 aaPredicted RBP14.92□□□□□ -0.02
TRAFD1-203ENST00000547063 CROCCQ5TZA2 2017 aa14.92□□□□□ -0.02
TRAFD1-203ENST00000547063 IGLV3-12A0A075B6K2 115 aa14.91□□□□□ -0.02
TRAFD1-203ENST00000547063 GLOD5A6NK44 160 aa14.91□□□□□ -0.02
TRAFD1-203ENST00000547063 MRASO14807 208 aa14.91□□□□□ -0.02
TRAFD1-203ENST00000547063 PGRMC2O15173 223 aa14.91□□□□□ -0.02
TRAFD1-203ENST00000547063 NVLO15381 856 aaKnown RBP14.91□□□□□ -0.02
TRAFD1-203ENST00000547063 CTNSO60931 367 aa14.91□□□□□ -0.02
TRAFD1-203ENST00000547063 DNAJB6O75190 326 aa14.91□□□□□ -0.02
TRAFD1-203ENST00000547063 ERAL1O75616 437 aaKnown RBP14.91□□□□□ -0.02
TRAFD1-203ENST00000547063 STK17BO94768 372 aa14.91□□□□□ -0.02
TRAFD1-203ENST00000547063 TNFSF15O95150 251 aa14.91□□□□□ -0.02
TRAFD1-203ENST00000547063 UNC5CO95185 931 aa14.91□□□□□ -0.02
TRAFD1-203ENST00000547063 CBX6O95503 412 aa14.91□□□□□ -0.02
TRAFD1-203ENST00000547063 GPR75O95800 540 aa14.91□□□□□ -0.02
TRAFD1-203ENST00000547063 CYC1P08574 325 aa14.91□□□□□ -0.02
TRAFD1-203ENST00000547063 KRT16P08779 473 aa14.91□□□□□ -0.02
TRAFD1-203ENST00000547063 CCNYL3P0C7X3 344 aa14.91□□□□□ -0.02
TRAFD1-203ENST00000547063 CSNK2A2P19784 350 aaPredicted RBP14.91□□□□□ -0.02
TRAFD1-203ENST00000547063 CD82P27701 267 aa14.91□□□□□ -0.02
TRAFD1-203ENST00000547063 RBMS1P29558 406 aaKnown RBP14.91□□□□□ -0.02
TRAFD1-203ENST00000547063 MPIP34949 423 aa14.91□□□□□ -0.02
TRAFD1-203ENST00000547063 TRPC1P48995 793 aa14.91□□□□□ -0.02
TRAFD1-203ENST00000547063 MXRA7P84157 204 aa14.91□□□□□ -0.02
TRAFD1-203ENST00000547063 ART3Q13508 389 aa14.91□□□□□ -0.02
TRAFD1-203ENST00000547063 MAP7Q14244 749 aa14.91□□□□□ -0.02
TRAFD1-203ENST00000547063 TLR1Q15399 786 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms