RNA–Protein interactions for RNA: ENST00000546744.5

PTCH1-212, Transcript of patched 1, humanhuman

TSL 2

Gene PTCH1, Length 4,389 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-212ENST00000546744 OR12D2P58182 307 aa12.31□□□□□ -0.44
PTCH1-212ENST00000546744 TATDN3Q17R31 274 aa12.31□□□□□ -0.44
PTCH1-212ENST00000546744 NHSL2Q5HYW2 709 aa12.31□□□□□ -0.44
PTCH1-212ENST00000546744 ZNF627Q7L945 461 aa12.31□□□□□ -0.44
PTCH1-212ENST00000546744 GRIN3AQ8TCU5 1115 aa12.31□□□□□ -0.44
PTCH1-212ENST00000546744 MIR1-1HGQ9H1L0 117 aa12.31□□□□□ -0.44
PTCH1-212ENST00000546744 HECAQ9UBI9 543 aaPredicted RBP12.31□□□□□ -0.44
PTCH1-212ENST00000546744 PCDHGC4Q9Y5F7 938 aa12.31□□□□□ -0.44
PTCH1-212ENST00000546744 ARL5AQ9Y689 179 aa12.31□□□□□ -0.44
PTCH1-212ENST00000546744 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.3□□□□□ -0.44
PTCH1-212ENST00000546744 A0A1W2PQ09 198 aa12.3□□□□□ -0.44
PTCH1-212ENST00000546744 TLX3O43711 291 aaPredicted RBP12.3□□□□□ -0.44
PTCH1-212ENST00000546744 IFNA2P01563 188 aa12.3□□□□□ -0.44
PTCH1-212ENST00000546744 LCKP06239 509 aa12.3□□□□□ -0.44
PTCH1-212ENST00000546744 UCHL1P09936 223 aa12.3□□□□□ -0.44
PTCH1-212ENST00000546744 UBBP0CG47 229 aa12.3□□□□□ -0.44
PTCH1-212ENST00000546744 UBCP0CG48 685 aaKnown RBP12.3□□□□□ -0.44
PTCH1-212ENST00000546744 ENDOUP21128 410 aaKnown RBP12.3□□□□□ -0.44
PTCH1-212ENST00000546744 FDXRP22570 491 aa12.3□□□□□ -0.44
PTCH1-212ENST00000546744 DDX6P26196 483 aaKnown RBP eCLIP12.3□□□□□ -0.44
PTCH1-212ENST00000546744 CEBPGP53567 150 aa12.3□□□□□ -0.44
PTCH1-212ENST00000546744 SNRPD2P62316 118 aaKnown RBP12.3□□□□□ -0.44
PTCH1-212ENST00000546744 RPS27AP62979 156 aaKnown RBP12.3□□□□□ -0.44
PTCH1-212ENST00000546744 UBA52P62987 128 aaKnown RBP12.3□□□□□ -0.44
PTCH1-212ENST00000546744 BCL2L15Q5TBC7 163 aa12.3□□□□□ -0.44
PTCH1-212ENST00000546744 UNC5DQ6UXZ4 953 aa12.3□□□□□ -0.44
PTCH1-212ENST00000546744 IDO2Q6ZQW0 420 aa12.3□□□□□ -0.44
PTCH1-212ENST00000546744 SSX6Q7RTT6 188 aa12.3□□□□□ -0.44
PTCH1-212ENST00000546744 LRRC28Q86X40 367 aaPredicted RBP12.3□□□□□ -0.44
PTCH1-212ENST00000546744 OR2L5Q8NG80 312 aa12.3□□□□□ -0.44
PTCH1-212ENST00000546744 TUBAL3A6NHL2 446 aa12.3□□□□□ -0.44
PTCH1-212ENST00000546744 IFNA1P01562 189 aa12.3□□□□□ -0.44
PTCH1-212ENST00000546744 GPX3P22352 226 aa12.3□□□□□ -0.44
PTCH1-212ENST00000546744 RBMXP38159 391 aaKnown RBP12.3□□□□□ -0.44
PTCH1-212ENST00000546744 HK3P52790 923 aa12.3□□□□□ -0.44
PTCH1-212ENST00000546744 FAPQ12884 760 aa12.3□□□□□ -0.44
PTCH1-212ENST00000546744 MLLT11Q13015 90 aaPredicted RBP12.3□□□□□ -0.44
PTCH1-212ENST00000546744 SYT6Q5T7P8 510 aaPredicted RBP12.3□□□□□ -0.44
PTCH1-212ENST00000546744 SLC39A4Q6P5W5 647 aa12.3□□□□□ -0.44
PTCH1-212ENST00000546744 SERPINA11Q86U17 422 aa12.3□□□□□ -0.44
PTCH1-212ENST00000546744 DTWD1Q8N5C7 304 aa12.3□□□□□ -0.44
PTCH1-212ENST00000546744 RHBGQ9H310 441 aa12.3□□□□□ -0.44
PTCH1-212ENST00000546744 MEPEQ9NQ76 525 aaPredicted RBP12.3□□□□□ -0.44
PTCH1-212ENST00000546744 FAM86C1Q9NVL1 165 aa12.3□□□□□ -0.44
PTCH1-212ENST00000546744 PRKAB1Q9Y478 270 aa12.3□□□□□ -0.44
PTCH1-212ENST00000546744 CLDN4O14493 209 aa12.3□□□□□ -0.44
PTCH1-212ENST00000546744 TFP02787 698 aa12.3□□□□□ -0.44
PTCH1-212ENST00000546744 PRNPP04156 253 aa12.3□□□□□ -0.44
PTCH1-212ENST00000546744 ALPLP05186 524 aa12.3□□□□□ -0.44
PTCH1-212ENST00000546744 TNFSF8P32971 234 aa12.3□□□□□ -0.44
PTCH1-212ENST00000546744 ADCYAP1R1P41586 468 aa12.3□□□□□ -0.44
PTCH1-212ENST00000546744 CLDN10P78369 228 aa12.3□□□□□ -0.44
PTCH1-212ENST00000546744 PLEKHS1Q5SXH7 462 aa12.3□□□□□ -0.44
PTCH1-212ENST00000546744 TIGD3Q6B0B8 471 aa12.3□□□□□ -0.44
PTCH1-212ENST00000546744 OR1J4Q8NGS1 313 aa12.3□□□□□ -0.44
PTCH1-212ENST00000546744 MFSD8Q8NHS3 518 aa12.3□□□□□ -0.44
PTCH1-212ENST00000546744 CD300LFQ8TDQ1 290 aa12.3□□□□□ -0.44
PTCH1-212ENST00000546744 SLC39A13Q96H72 371 aa12.3□□□□□ -0.44
PTCH1-212ENST00000546744 OARD1Q9Y530 152 aa12.3□□□□□ -0.44
PTCH1-212ENST00000546744 N6AMT1Q9Y5N5 214 aa12.3□□□□□ -0.44
PTCH1-212ENST00000546744 COLEC10Q9Y6Z7 277 aa12.3□□□□□ -0.44
PTCH1-212ENST00000546744 C7orf72A4D263 438 aa12.3□□□□□ -0.44
PTCH1-212ENST00000546744 MMP20O60882 483 aa12.3□□□□□ -0.44
PTCH1-212ENST00000546744 CFHP08603 1231 aa12.3□□□□□ -0.44
PTCH1-212ENST00000546744 BMP4P12644 408 aa12.3□□□□□ -0.44
PTCH1-212ENST00000546744 PTPN2P17706 415 aa12.3□□□□□ -0.44
PTCH1-212ENST00000546744 IDSP22304 550 aa12.3□□□□□ -0.44
PTCH1-212ENST00000546744 HTR1BP28222 390 aa12.3□□□□□ -0.44
PTCH1-212ENST00000546744 NOVP48745 357 aa12.3□□□□□ -0.44
PTCH1-212ENST00000546744 ZNF155Q12901 538 aaPredicted RBP12.3□□□□□ -0.44
PTCH1-212ENST00000546744 LASP1Q14847 261 aaKnown RBP12.3□□□□□ -0.44
PTCH1-212ENST00000546744 SPCS2Q15005 226 aa12.3□□□□□ -0.44
PTCH1-212ENST00000546744 HMGN3Q15651 99 aa12.3□□□□□ -0.44
PTCH1-212ENST00000546744 SCGB2B2Q4G0G5 96 aa12.3□□□□□ -0.44
PTCH1-212ENST00000546744 HES5Q5TA89 166 aa12.3□□□□□ -0.44
PTCH1-212ENST00000546744 CNIH2Q6PI25 160 aa12.3□□□□□ -0.44
PTCH1-212ENST00000546744 ZMIZ2Q8NF64 920 aa12.3□□□□□ -0.44
PTCH1-212ENST00000546744 OR56B4Q8NH76 319 aa12.3□□□□□ -0.44
PTCH1-212ENST00000546744 SMAP2Q8WU79 429 aaPredicted RBP12.3□□□□□ -0.44
PTCH1-212ENST00000546744 FERD3LQ96RJ6 166 aa12.3□□□□□ -0.44
PTCH1-212ENST00000546744 SECISBP2Q96T21 854 aaKnown RBP12.3□□□□□ -0.44
PTCH1-212ENST00000546744 PHB2Q99623 299 aa12.3□□□□□ -0.44
PTCH1-212ENST00000546744 RAD9AQ99638 391 aa12.3□□□□□ -0.44
PTCH1-212ENST00000546744 RAB5CP51148 216 aa12.29□□□□□ -0.44
PTCH1-212ENST00000546744 CCR8P51685 355 aa12.29□□□□□ -0.44
PTCH1-212ENST00000546744 ATXN1P54253 815 aaKnown RBP12.29□□□□□ -0.44
PTCH1-212ENST00000546744 SLBPQ14493 270 aaKnown RBP eCLIP12.29□□□□□ -0.44
PTCH1-212ENST00000546744 DUSP28Q4G0W2 176 aa12.29□□□□□ -0.44
PTCH1-212ENST00000546744 BCL7AQ4VC05 210 aa12.29□□□□□ -0.44
PTCH1-212ENST00000546744 TMEM205Q6UW68 189 aa12.29□□□□□ -0.44
PTCH1-212ENST00000546744 CEACAM19Q7Z692 300 aa12.29□□□□□ -0.44
PTCH1-212ENST00000546744 RGL4Q8IZJ4 473 aa12.29□□□□□ -0.44
PTCH1-212ENST00000546744 PPP1R13LQ8WUF5 828 aa12.29□□□□□ -0.44
PTCH1-212ENST00000546744 KLRG1Q96E93 195 aa12.29□□□□□ -0.44
PTCH1-212ENST00000546744 DUS3LQ96G46 650 aaKnown RBP12.29□□□□□ -0.44
PTCH1-212ENST00000546744 C1orf74Q96LT6 269 aa12.29□□□□□ -0.44
PTCH1-212ENST00000546744 VRK1Q99986 396 aaPredicted RBP12.29□□□□□ -0.44
PTCH1-212ENST00000546744 DHRS9Q9BPW9 319 aa12.29□□□□□ -0.44
PTCH1-212ENST00000546744 PSD2Q9BQI7 771 aa12.29□□□□□ -0.44
PTCH1-212ENST00000546744 TEX10Q9NXF1 929 aaPredicted RBP12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms