RNA–Protein interactions for RNA: ENST00000545688.5

SNHG1-224, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3

Gene SNHG1, Length 610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-224ENST00000545688 FCGR2CP31995 323 aa3.42□□□□□ -1.86
SNHG1-224ENST00000545688 MAP2K1Q02750 393 aaPredicted RBP3.42□□□□□ -1.86
SNHG1-224ENST00000545688 SULT2A1Q06520 285 aa3.42□□□□□ -1.86
SNHG1-224ENST00000545688 ZNF506Q5JVG8 444 aa3.42□□□□□ -1.86
SNHG1-224ENST00000545688 MACC1Q6ZN28 852 aa3.42□□□□□ -1.86
SNHG1-224ENST00000545688 Q6ZVQ6 151 aa3.42□□□□□ -1.86
SNHG1-224ENST00000545688 SERINC5Q86VE9 423 aa3.42□□□□□ -1.86
SNHG1-224ENST00000545688 KIAA1524Q8TCG1 905 aa3.42□□□□□ -1.86
SNHG1-224ENST00000545688 EXT2Q93063 718 aa3.42□□□□□ -1.86
SNHG1-224ENST00000545688 CFAP57Q96MR6 1250 aa3.42□□□□□ -1.86
SNHG1-224ENST00000545688 FNDC4Q9H6D8 234 aaPredicted RBP3.42□□□□□ -1.86
SNHG1-224ENST00000545688 MARCH7Q9H992 704 aa3.42□□□□□ -1.86
SNHG1-224ENST00000545688 WDR41Q9HAD4 459 aa3.42□□□□□ -1.86
SNHG1-224ENST00000545688 IARS2Q9NSE4 1012 aaKnown RBP3.42□□□□□ -1.86
SNHG1-224ENST00000545688 RANBP2P49792 3224 aaKnown RBP3.42□□□□□ -1.86
SNHG1-224ENST00000545688 N4BP2Q86UW6 1770 aaPredicted RBP3.42□□□□□ -1.86
SNHG1-224ENST00000545688 BRCA2P51587 3418 aa3.42□□□□□ -1.86
SNHG1-224ENST00000545688 VIRMAQ69YN4 1812 aaKnown RBP3.42□□□□□ -1.86
SNHG1-224ENST00000545688 EVC2Q86UK5 1308 aa3.42□□□□□ -1.86
SNHG1-224ENST00000545688 INSRP06213 1382 aa3.41□□□□□ -1.86
SNHG1-224ENST00000545688 KTN1Q86UP2 1357 aaKnown RBP3.41□□□□□ -1.86
SNHG1-224ENST00000545688 IGKV6D-21A0A0A0MT36 114 aa3.41□□□□□ -1.86
SNHG1-224ENST00000545688 A0A1W2PPW3 197 aa3.41□□□□□ -1.86
SNHG1-224ENST00000545688 FAM168BA1KXE4 195 aa3.41□□□□□ -1.86
SNHG1-224ENST00000545688 E5RGE8 158 aa3.41□□□□□ -1.86
SNHG1-224ENST00000545688 HAT1O14929 419 aa3.41□□□□□ -1.86
SNHG1-224ENST00000545688 SEMA4FO95754 770 aa3.41□□□□□ -1.86
SNHG1-224ENST00000545688 MT-ND2P03891 347 aa3.41□□□□□ -1.86
SNHG1-224ENST00000545688 MYBL1P10243 752 aa3.41□□□□□ -1.86
SNHG1-224ENST00000545688 ZNF19P17023 458 aa3.41□□□□□ -1.86
SNHG1-224ENST00000545688 FEN1P39748 380 aaKnown RBP3.41□□□□□ -1.86
SNHG1-224ENST00000545688 CRYBA2P53672 197 aa3.41□□□□□ -1.86
SNHG1-224ENST00000545688 MZT1Q08AG7 82 aa3.41□□□□□ -1.86
SNHG1-224ENST00000545688 CYLC2Q14093 348 aaPredicted RBP3.41□□□□□ -1.86
SNHG1-224ENST00000545688 DEFB115Q30KQ5 88 aa3.41□□□□□ -1.86
SNHG1-224ENST00000545688 POM121L1PQ3SYA9 428 aa3.41□□□□□ -1.86
SNHG1-224ENST00000545688 RSBN1Q5VWQ0 802 aaPredicted RBP3.41□□□□□ -1.86
SNHG1-224ENST00000545688 CST9LP1Q5W188 147 aa3.41□□□□□ -1.86
SNHG1-224ENST00000545688 MOXD1Q6UVY6 613 aa3.41□□□□□ -1.86
SNHG1-224ENST00000545688 TRMT11Q7Z4G4 463 aaKnown RBP3.41□□□□□ -1.86
SNHG1-224ENST00000545688 NRARPQ7Z6K4 114 aa3.41□□□□□ -1.86
SNHG1-224ENST00000545688 APCDD1Q8J025 514 aa3.41□□□□□ -1.86
SNHG1-224ENST00000545688 PARP8Q8N3A8 854 aa3.41□□□□□ -1.86
SNHG1-224ENST00000545688 PGAP3Q96FM1 320 aaPredicted RBP3.41□□□□□ -1.86
SNHG1-224ENST00000545688 RADILQ96JH8 1075 aa3.41□□□□□ -1.86
SNHG1-224ENST00000545688 YTHDF1Q9BYJ9 559 aaKnown RBP3.41□□□□□ -1.86
SNHG1-224ENST00000545688 KCNK13Q9HB14 408 aa3.41□□□□□ -1.86
SNHG1-224ENST00000545688 ZNF346Q9UL40 294 aaKnown RBP3.41□□□□□ -1.86
SNHG1-224ENST00000545688 AGTPBP1Q9UPW5 1226 aa3.41□□□□□ -1.86
SNHG1-224ENST00000545688 SATB2Q9UPW6 733 aa3.41□□□□□ -1.86
SNHG1-224ENST00000545688 NSG2Q9Y328 171 aa3.41□□□□□ -1.86
SNHG1-224ENST00000545688 SMG6Q86US8 1419 aaKnown RBP3.41□□□□□ -1.86
SNHG1-224ENST00000545688 CUL9Q8IWT3 2517 aa3.41□□□□□ -1.86
SNHG1-224ENST00000545688 C4AP0C0L4 1744 aa3.41□□□□□ -1.86
SNHG1-224ENST00000545688 PCDH11XQ9BZA7 1347 aa3.41□□□□□ -1.86
SNHG1-224ENST00000545688 SALL1Q9NSC2 1324 aa3.41□□□□□ -1.86
SNHG1-224ENST00000545688 THSD7BQ9C0I4 1608 aa3.41□□□□□ -1.86
SNHG1-224ENST00000545688 HTTP42858 3142 aa3.4□□□□□ -1.86
SNHG1-224ENST00000545688 LMO7DNF2Z398 122 aa3.4□□□□□ -1.87
SNHG1-224ENST00000545688 PRAF2O60831 178 aa3.4□□□□□ -1.87
SNHG1-224ENST00000545688 LUC7L3O95232 432 aaKnown RBP3.4□□□□□ -1.87
SNHG1-224ENST00000545688 LY6G6DO95868 133 aa3.4□□□□□ -1.87
SNHG1-224ENST00000545688 ADRB2P07550 413 aa3.4□□□□□ -1.87
SNHG1-224ENST00000545688 QDPRP09417 244 aa3.4□□□□□ -1.87
SNHG1-224ENST00000545688 ANPEPP15144 967 aa3.4□□□□□ -1.87
SNHG1-224ENST00000545688 TCF4P15884 667 aa3.4□□□□□ -1.87
SNHG1-224ENST00000545688 ZBTB25P24278 435 aa3.4□□□□□ -1.87
SNHG1-224ENST00000545688 HSPA4P34932 840 aa3.4□□□□□ -1.87
SNHG1-224ENST00000545688 DRD3P35462 400 aa3.4□□□□□ -1.87
SNHG1-224ENST00000545688 MATKP42679 507 aa3.4□□□□□ -1.87
SNHG1-224ENST00000545688 SLC1A4P43007 532 aa3.4□□□□□ -1.87
SNHG1-224ENST00000545688 RGS7P49802 495 aa3.4□□□□□ -1.87
SNHG1-224ENST00000545688 PPIAP62937 165 aaKnown RBP3.4□□□□□ -1.87
SNHG1-224ENST00000545688 GRB14Q14449 540 aa3.4□□□□□ -1.87
SNHG1-224ENST00000545688 ZNF542PQ5EBM4 170 aa3.4□□□□□ -1.87
SNHG1-224ENST00000545688 NHLRC3Q5JS37 347 aa3.4□□□□□ -1.87
SNHG1-224ENST00000545688 OLFML2AQ68BL7 652 aa3.4□□□□□ -1.87
SNHG1-224ENST00000545688 EDC4Q6P2E9 1401 aaKnown RBP3.4□□□□□ -1.87
SNHG1-224ENST00000545688 Q71RC1 249 aaPredicted RBP3.4□□□□□ -1.87
SNHG1-224ENST00000545688 COX8CQ7Z4L0 72 aa3.4□□□□□ -1.87
SNHG1-224ENST00000545688 FAM219AQ8IW50 185 aa3.4□□□□□ -1.87
SNHG1-224ENST00000545688 HSCBQ8IWL3 235 aa3.4□□□□□ -1.87
SNHG1-224ENST00000545688 B3GALT6Q96L58 329 aa3.4□□□□□ -1.87
SNHG1-224ENST00000545688 LINC00167Q96N53 147 aa3.4□□□□□ -1.87
SNHG1-224ENST00000545688 PCDHB18PQ96TA0 734 aa3.4□□□□□ -1.87
SNHG1-224ENST00000545688 NUDT16L1Q9BRJ7 211 aaKnown RBP3.4□□□□□ -1.87
SNHG1-224ENST00000545688 DEPPQ9NTK1 212 aa3.4□□□□□ -1.87
SNHG1-224ENST00000545688 ADAMTSL1Q8N6G6 1762 aa3.4□□□□□ -1.87
SNHG1-224ENST00000545688 LAMA3Q16787 3333 aa3.4□□□□□ -1.87
SNHG1-224ENST00000545688 USP42Q9H9J4 1324 aaKnown RBP3.4□□□□□ -1.87
SNHG1-224ENST00000545688 ZNF831Q5JPB2 1677 aa3.39□□□□□ -1.87
SNHG1-224ENST00000545688 RTL1A6NKG5 1358 aa3.39□□□□□ -1.87
SNHG1-224ENST00000545688 TONSLQ96HA7 1378 aa3.39□□□□□ -1.87
SNHG1-224ENST00000545688 MON2Q7Z3U7 1717 aa3.39□□□□□ -1.87
SNHG1-224ENST00000545688 URADA6NGE7 173 aa3.39□□□□□ -1.87
SNHG1-224ENST00000545688 MLNRO43193 412 aa3.39□□□□□ -1.87
SNHG1-224ENST00000545688 OR6B1O95007 311 aa3.39□□□□□ -1.87
SNHG1-224ENST00000545688 FYNP06241 537 aa3.39□□□□□ -1.87
SNHG1-224ENST00000545688 GOT1P17174 413 aa3.39□□□□□ -1.87
SNHG1-224ENST00000545688 IL11P20809 199 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms