RNA–Protein interactions for RNA: ENST00000545215.5

LDHA-223, Transcript of lactate dehydrogenase A, humanhuman

TSL 1 (best)

Gene LDHA, Length 1,340 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-223ENST00000545215 H7C0S8 307 aa6.3□□□□□ -1.4
LDHA-223ENST00000545215 ALOX12BO75342 701 aa6.3□□□□□ -1.4
LDHA-223ENST00000545215 ERLIN1O75477 346 aa6.3□□□□□ -1.4
LDHA-223ENST00000545215 ITGA10O75578 1167 aa6.3□□□□□ -1.4
LDHA-223ENST00000545215 CYP7B1O75881 506 aa6.3□□□□□ -1.4
LDHA-223ENST00000545215 USP1O94782 785 aa6.3□□□□□ -1.4
LDHA-223ENST00000545215 EML2O95834 649 aa6.3□□□□□ -1.4
LDHA-223ENST00000545215 SOD1P00441 154 aa6.3□□□□□ -1.4
LDHA-223ENST00000545215 STATHP02808 62 aa6.3□□□□□ -1.4
LDHA-223ENST00000545215 EBLN1P0CF75 366 aa6.3□□□□□ -1.4
LDHA-223ENST00000545215 SRD5A1P18405 259 aa6.3□□□□□ -1.4
LDHA-223ENST00000545215 SPINT3P49223 89 aa6.3□□□□□ -1.4
LDHA-223ENST00000545215 ACVR1Q04771 509 aa6.3□□□□□ -1.4
LDHA-223ENST00000545215 DPTQ07507 201 aa6.3□□□□□ -1.4
LDHA-223ENST00000545215 MSLNQ13421 630 aaPredicted RBP6.3□□□□□ -1.4
LDHA-223ENST00000545215 ITGA9Q13797 1035 aa6.3□□□□□ -1.4
LDHA-223ENST00000545215 BLMHQ13867 455 aa6.3□□□□□ -1.4
LDHA-223ENST00000545215 SPARCL1Q14515 664 aa6.3□□□□□ -1.4
LDHA-223ENST00000545215 ZSCAN26Q16670 478 aa6.3□□□□□ -1.4
LDHA-223ENST00000545215 GPR33Q49SQ1 333 aa6.3□□□□□ -1.4
LDHA-223ENST00000545215 PYCR3Q53H96 274 aa6.3□□□□□ -1.4
LDHA-223ENST00000545215 AARS2Q5JTZ9 985 aaKnown RBP6.3□□□□□ -1.4
LDHA-223ENST00000545215 TSTD2Q5T7W7 516 aa6.3□□□□□ -1.4
LDHA-223ENST00000545215 ANKRD22Q5VYY1 191 aa6.3□□□□□ -1.4
LDHA-223ENST00000545215 PGBD2Q6P3X8 592 aa6.3□□□□□ -1.4
LDHA-223ENST00000545215 CASC4Q6P4E1 433 aa6.3□□□□□ -1.4
LDHA-223ENST00000545215 EMBQ6PCB8 327 aa6.3□□□□□ -1.4
LDHA-223ENST00000545215 IYDQ6PHW0 289 aa6.3□□□□□ -1.4
LDHA-223ENST00000545215 CYS1Q717R9 158 aa6.3□□□□□ -1.4
LDHA-223ENST00000545215 ZNF534Q76KX8 674 aa6.3□□□□□ -1.4
LDHA-223ENST00000545215 TRMT10CQ7L0Y3 403 aaKnown RBP6.3□□□□□ -1.4
LDHA-223ENST00000545215 CAND1Q86VP6 1230 aaKnown RBP6.3□□□□□ -1.4
LDHA-223ENST00000545215 GALNT13Q8IUC8 556 aa6.3□□□□□ -1.4
LDHA-223ENST00000545215 GHDCQ8N2G8 530 aa6.3□□□□□ -1.4
LDHA-223ENST00000545215 MPP5Q8N3R9 675 aa6.3□□□□□ -1.4
LDHA-223ENST00000545215 PYROXD1Q8WU10 500 aa6.3□□□□□ -1.4
LDHA-223ENST00000545215 HEXDCQ8WVB3 486 aa6.3□□□□□ -1.4
LDHA-223ENST00000545215 IFT81Q8WYA0 676 aa6.3□□□□□ -1.4
LDHA-223ENST00000545215 TBRG4Q969Z0 631 aaKnown RBP eCLIP6.3□□□□□ -1.4
LDHA-223ENST00000545215 PTERQ96BW5 349 aa6.3□□□□□ -1.4
LDHA-223ENST00000545215 NMD3Q96D46 503 aaKnown RBP6.3□□□□□ -1.4
LDHA-223ENST00000545215 THOC3Q96J01 351 aaKnown RBP6.3□□□□□ -1.4
LDHA-223ENST00000545215 SMIM14Q96QK8 99 aa6.3□□□□□ -1.4
LDHA-223ENST00000545215 AGAP2Q99490 1192 aa6.3□□□□□ -1.4
LDHA-223ENST00000545215 EBNA1BP2Q99848 306 aaKnown RBP6.3□□□□□ -1.4
LDHA-223ENST00000545215 APOL2Q9BQE5 337 aa6.3□□□□□ -1.4
LDHA-223ENST00000545215 ZSCAN5AQ9BUG6 496 aa6.3□□□□□ -1.4
LDHA-223ENST00000545215 RIOK2Q9BVS4 552 aaKnown RBP6.3□□□□□ -1.4
LDHA-223ENST00000545215 REG4Q9BYZ8 158 aa6.3□□□□□ -1.4
LDHA-223ENST00000545215 FAM83DQ9H4H8 585 aa6.3□□□□□ -1.4
LDHA-223ENST00000545215 ZDHHC18Q9NUE0 388 aa6.3□□□□□ -1.4
LDHA-223ENST00000545215 TMEM140Q9NV12 185 aa6.3□□□□□ -1.4
LDHA-223ENST00000545215 ING3Q9NXR8 418 aa6.3□□□□□ -1.4
LDHA-223ENST00000545215 FBXL4Q9UKA2 621 aa6.3□□□□□ -1.4
LDHA-223ENST00000545215 TCAF1Q9Y4C2 921 aa6.3□□□□□ -1.4
LDHA-223ENST00000545215 MAD1L1Q9Y6D9 718 aa6.3□□□□□ -1.4
LDHA-223ENST00000545215 CR1P17927 2039 aa6.29□□□□□ -1.4
LDHA-223ENST00000545215 IGHV5-51A0A0C4DH38 117 aa6.29□□□□□ -1.4
LDHA-223ENST00000545215 TCRBV7S3A2A0A539 114 aa6.29□□□□□ -1.4
LDHA-223ENST00000545215 CLCA1A8K7I4 914 aa6.29□□□□□ -1.4
LDHA-223ENST00000545215 GPR89AB7ZAQ6 455 aa6.29□□□□□ -1.4
LDHA-223ENST00000545215 C9J4A7 227 aa6.29□□□□□ -1.4
LDHA-223ENST00000545215 NPIPA5E9PKD4 350 aa6.29□□□□□ -1.4
LDHA-223ENST00000545215 GOLGA8MH3BSY2 632 aa6.29□□□□□ -1.4
LDHA-223ENST00000545215 SYT5O00445 386 aa6.29□□□□□ -1.4
LDHA-223ENST00000545215 TP73O15350 636 aa6.29□□□□□ -1.4
LDHA-223ENST00000545215 CLDN7O95471 211 aa6.29□□□□□ -1.4
LDHA-223ENST00000545215 AHSGP02765 367 aa6.29□□□□□ -1.4
LDHA-223ENST00000545215 CSTBP04080 98 aaKnown RBP6.29□□□□□ -1.4
LDHA-223ENST00000545215 GPR89BP0CG08 455 aa6.29□□□□□ -1.4
LDHA-223ENST00000545215 HSD3B1P14060 373 aa6.29□□□□□ -1.4
LDHA-223ENST00000545215 TPH1P17752 444 aa6.29□□□□□ -1.4
LDHA-223ENST00000545215 ITGALP20701 1170 aa6.29□□□□□ -1.4
LDHA-223ENST00000545215 FPR1P21462 350 aa6.29□□□□□ -1.4
LDHA-223ENST00000545215 PAX7P23759 505 aa6.29□□□□□ -1.4
LDHA-223ENST00000545215 MGAT1P26572 445 aa6.29□□□□□ -1.4
LDHA-223ENST00000545215 PHBP35232 272 aa6.29□□□□□ -1.4
LDHA-223ENST00000545215 FOLR3P41439 243 aa6.29□□□□□ -1.4
LDHA-223ENST00000545215 GRIA1P42261 906 aa6.29□□□□□ -1.4
LDHA-223ENST00000545215 CARSP49589 748 aaKnown RBP6.29□□□□□ -1.4
LDHA-223ENST00000545215 ZNF140P52738 457 aaPredicted RBP6.29□□□□□ -1.4
LDHA-223ENST00000545215 PRAMEP78395 509 aa6.29□□□□□ -1.4
LDHA-223ENST00000545215 HSF1Q00613 529 aa6.29□□□□□ -1.4
LDHA-223ENST00000545215 PMPCAQ10713 525 aa6.29□□□□□ -1.4
LDHA-223ENST00000545215 PDIA2Q13087 525 aaKnown RBP6.29□□□□□ -1.4
LDHA-223ENST00000545215 LRP8Q14114 963 aa6.29□□□□□ -1.4
LDHA-223ENST00000545215 POU6F1Q14863 301 aa6.29□□□□□ -1.4
LDHA-223ENST00000545215 KCNMB1Q16558 191 aa6.29□□□□□ -1.4
LDHA-223ENST00000545215 SPANXN3Q5MJ09 141 aa6.29□□□□□ -1.4
LDHA-223ENST00000545215 C6orf52Q5T4I8 152 aa6.29□□□□□ -1.4
LDHA-223ENST00000545215 AP1ARQ63HQ0 302 aa6.29□□□□□ -1.4
LDHA-223ENST00000545215 MRNIPQ6NTE8 343 aa6.29□□□□□ -1.4
LDHA-223ENST00000545215 AFTPHQ6ULP2 937 aa6.29□□□□□ -1.4
LDHA-223ENST00000545215 ZDHHC24Q6UX98 284 aa6.29□□□□□ -1.4
LDHA-223ENST00000545215 CERS6Q6ZMG9 384 aa6.29□□□□□ -1.4
LDHA-223ENST00000545215 FAM92BQ6ZTR7 304 aa6.29□□□□□ -1.4
LDHA-223ENST00000545215 LARP4Q71RC2 724 aaKnown RBP eCLIP6.29□□□□□ -1.48e-19■■□□□ 11.7
LDHA-223ENST00000545215 CBLL1Q75N03 491 aa6.29□□□□□ -1.4
LDHA-223ENST00000545215 SDCCAG8Q86SQ7 713 aaPredicted RBP6.29□□□□□ -1.4
LDHA-223ENST00000545215 SLC9B2Q86UD5 537 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms