RNA–Protein interactions for RNA: ENST00000544990.5

CPSF7-224, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 646 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-224ENST00000544990 XPR1Q9UBH6 696 aa6.93□□□□□ -1.3
CPSF7-224ENST00000544990 TEKT2Q9UIF3 430 aa6.93□□□□□ -1.3
CPSF7-224ENST00000544990 MRPS33Q9Y291 106 aaKnown RBP6.93□□□□□ -1.3
CPSF7-224ENST00000544990 B3GNT3Q9Y2A9 372 aa6.93□□□□□ -1.3
CPSF7-224ENST00000544990 ASB1Q9Y576 335 aa6.93□□□□□ -1.3
CPSF7-224ENST00000544990 SPACA6W5XKT8 324 aa6.93□□□□□ -1.3
CPSF7-224ENST00000544990 SMG1Q96Q15 3661 aaKnown RBP6.93□□□□□ -1.3
CPSF7-224ENST00000544990 SPTA1P02549 2419 aa6.92□□□□□ -1.3
CPSF7-224ENST00000544990 TLN1Q9Y490 2541 aaKnown RBP6.92□□□□□ -1.3
CPSF7-224ENST00000544990 A0A0G2JN53 185 aa6.92□□□□□ -1.3
CPSF7-224ENST00000544990 DYTNA2CJ06 578 aa6.92□□□□□ -1.3
CPSF7-224ENST00000544990 OR2W5A6NFC9 320 aa6.92□□□□□ -1.3
CPSF7-224ENST00000544990 E2F3O00716 465 aa6.92□□□□□ -1.3
CPSF7-224ENST00000544990 ZNF500O60304 480 aaPredicted RBP6.92□□□□□ -1.3
CPSF7-224ENST00000544990 SEC24DO94855 1032 aaPredicted RBP6.92□□□□□ -1.3
CPSF7-224ENST00000544990 SIX3O95343 332 aaPredicted RBP6.92□□□□□ -1.3
CPSF7-224ENST00000544990 CLDN9O95484 217 aa6.92□□□□□ -1.3
CPSF7-224ENST00000544990 TGFB1P01137 390 aa6.92□□□□□ -1.3
CPSF7-224ENST00000544990 MYBL2P10244 700 aa6.92□□□□□ -1.3
CPSF7-224ENST00000544990 NAT2P11245 290 aa6.92□□□□□ -1.3
CPSF7-224ENST00000544990 CD22P20273 847 aa6.92□□□□□ -1.3
CPSF7-224ENST00000544990 PTX3P26022 381 aaPredicted RBP6.92□□□□□ -1.3
CPSF7-224ENST00000544990 GCAP28676 217 aa6.92□□□□□ -1.3
CPSF7-224ENST00000544990 EEF1DP29692 281 aaKnown RBP6.92□□□□□ -1.3
CPSF7-224ENST00000544990 PIK3CBP42338 1070 aa6.92□□□□□ -1.3
CPSF7-224ENST00000544990 CCNG1P51959 295 aa6.92□□□□□ -1.3
CPSF7-224ENST00000544990 RAP1GDS1P52306 607 aa6.92□□□□□ -1.3
CPSF7-224ENST00000544990 MLLT10P55197 1068 aa6.92□□□□□ -1.3
CPSF7-224ENST00000544990 RAB38P57729 211 aa6.92□□□□□ -1.3
CPSF7-224ENST00000544990 MFAP5Q13361 173 aa6.92□□□□□ -1.3
CPSF7-224ENST00000544990 AP5B1Q2VPB7 878 aa6.92□□□□□ -1.3
CPSF7-224ENST00000544990 BTBD16Q32M84 506 aa6.92□□□□□ -1.3
CPSF7-224ENST00000544990 TMEM35AQ53FP2 167 aa6.92□□□□□ -1.3
CPSF7-224ENST00000544990 SFT2D3Q587I9 215 aa6.92□□□□□ -1.3
CPSF7-224ENST00000544990 COLEC12Q5KU26 742 aa6.92□□□□□ -1.3
CPSF7-224ENST00000544990 PLAG1Q6DJT9 500 aa6.92□□□□□ -1.3
CPSF7-224ENST00000544990 ABHD17CQ6PCB6 329 aa6.92□□□□□ -1.3
CPSF7-224ENST00000544990 PAPD4Q6PIY7 484 aaKnown RBP6.92□□□□□ -1.3
CPSF7-224ENST00000544990 IGFL2Q6UWQ7 119 aa6.92□□□□□ -1.3
CPSF7-224ENST00000544990 LANCL3Q6ZV70 420 aa6.92□□□□□ -1.3
CPSF7-224ENST00000544990 GOLGA7Q7Z5G4 137 aa6.92□□□□□ -1.3
CPSF7-224ENST00000544990 GSPT2Q8IYD1 628 aaKnown RBP6.92□□□□□ -1.3
CPSF7-224ENST00000544990 IQCKQ8N0W5 287 aa6.92□□□□□ -1.3
CPSF7-224ENST00000544990 CELF2-AS1Q8N7Q2 184 aa6.92□□□□□ -1.3
CPSF7-224ENST00000544990 C7orf57Q8NEG2 295 aa6.92□□□□□ -1.3
CPSF7-224ENST00000544990 OR7G3Q8NG95 312 aa6.92□□□□□ -1.3
CPSF7-224ENST00000544990 M1APQ8TC57 530 aa6.92□□□□□ -1.3
CPSF7-224ENST00000544990 CPT1CQ8TCG5 803 aa6.92□□□□□ -1.3
CPSF7-224ENST00000544990 BRIX1Q8TDN6 353 aaKnown RBP6.92□□□□□ -1.3
CPSF7-224ENST00000544990 ZNF473Q8WTR7 871 aaKnown RBP6.92□□□□□ -1.3
CPSF7-224ENST00000544990 MAGEB10Q96LZ2 347 aaPredicted RBP6.92□□□□□ -1.3
CPSF7-224ENST00000544990 QRFPRQ96P65 431 aa6.92□□□□□ -1.3
CPSF7-224ENST00000544990 KCNC2Q96PR1 638 aa6.92□□□□□ -1.3
CPSF7-224ENST00000544990 F2RL3Q96RI0 385 aa6.92□□□□□ -1.3
CPSF7-224ENST00000544990 WDR77Q9BQA1 342 aaPredicted RBP6.92□□□□□ -1.3
CPSF7-224ENST00000544990 MESP1Q9BRJ9 268 aa6.92□□□□□ -1.3
CPSF7-224ENST00000544990 NTMT1Q9BV86 223 aa6.92□□□□□ -1.3
CPSF7-224ENST00000544990 MS4A8Q9BY19 250 aa6.92□□□□□ -1.3
CPSF7-224ENST00000544990 AICDAQ9GZX7 198 aa6.92□□□□□ -1.3
CPSF7-224ENST00000544990 ILKAPQ9H0C8 392 aaPredicted RBP6.92□□□□□ -1.3
CPSF7-224ENST00000544990 NOL11Q9H8H0 719 aaKnown RBP6.92□□□□□ -1.3
CPSF7-224ENST00000544990 PRTFDC1Q9NRG1 225 aa6.92□□□□□ -1.3
CPSF7-224ENST00000544990 PTGFRNQ9P2B2 879 aa6.92□□□□□ -1.3
CPSF7-224ENST00000544990 TBK1Q9UHD2 729 aa6.92□□□□□ -1.3
CPSF7-224ENST00000544990 DCDC2Q9UHG0 476 aa6.92□□□□□ -1.3
CPSF7-224ENST00000544990 TSC22D4Q9Y3Q8 395 aa6.92□□□□□ -1.3
CPSF7-224ENST00000544990 MMACHCQ9Y4U1 282 aa6.92□□□□□ -1.3
CPSF7-224ENST00000544990 IGHV3-20A0A0C4DH32 117 aa6.91□□□□□ -1.3
CPSF7-224ENST00000544990 TLDC2A0PJX2 215 aa6.91□□□□□ -1.3
CPSF7-224ENST00000544990 BLACEA4D250 179 aa6.91□□□□□ -1.3
CPSF7-224ENST00000544990 LRRC14BA6NHZ5 514 aa6.91□□□□□ -1.3
CPSF7-224ENST00000544990 A8MUI8 341 aa6.91□□□□□ -1.3
CPSF7-224ENST00000544990 C4orf51C9J302 202 aa6.91□□□□□ -1.3
CPSF7-224ENST00000544990 FAM227AF5H4B4 570 aa6.91□□□□□ -1.3
CPSF7-224ENST00000544990 H0YIV9 168 aa6.91□□□□□ -1.3
CPSF7-224ENST00000544990 PDPK1O15530 556 aa6.91□□□□□ -1.3
CPSF7-224ENST00000544990 DNAJB6O75190 326 aa6.91□□□□□ -1.3
CPSF7-224ENST00000544990 VPS4BO75351 444 aa6.91□□□□□ -1.3
CPSF7-224ENST00000544990 SORBS2O94875 1100 aaKnown RBP6.91□□□□□ -1.3
CPSF7-224ENST00000544990 SLU7O95391 586 aaKnown RBP6.91□□□□□ -1.3
CPSF7-224ENST00000544990 TBX6O95947 436 aaPredicted RBP6.91□□□□□ -1.3
CPSF7-224ENST00000544990 GSTA1P08263 222 aa6.91□□□□□ -1.3
CPSF7-224ENST00000544990 ITGAMP11215 1152 aa6.91□□□□□ -1.3
CPSF7-224ENST00000544990 KRT15P19012 456 aa6.91□□□□□ -1.3
CPSF7-224ENST00000544990 CERS1P27544 350 aa6.91□□□□□ -1.3
CPSF7-224ENST00000544990 SSR2P43308 183 aa6.91□□□□□ -1.3
CPSF7-224ENST00000544990 TSFMP43897 325 aaKnown RBP6.91□□□□□ -1.3
CPSF7-224ENST00000544990 EFNA3P52797 238 aa6.91□□□□□ -1.3
CPSF7-224ENST00000544990 ARFIP1P53367 373 aa6.91□□□□□ -1.3
CPSF7-224ENST00000544990 LIM2P55344 173 aa6.91□□□□□ -1.3
CPSF7-224ENST00000544990 HSD17B7P56937 341 aa6.91□□□□□ -1.3
CPSF7-224ENST00000544990 TAS2R50P59544 299 aa6.91□□□□□ -1.3
CPSF7-224ENST00000544990 ARG2P78540 354 aa6.91□□□□□ -1.3
CPSF7-224ENST00000544990 BTG2P78543 158 aa6.91□□□□□ -1.3
CPSF7-224ENST00000544990 SLC13A2Q13183 592 aa6.91□□□□□ -1.3
CPSF7-224ENST00000544990 DDX39BQ13838 428 aaKnown RBP6.91□□□□□ -1.3
CPSF7-224ENST00000544990 RUNX2Q13950 521 aa6.91□□□□□ -1.3
CPSF7-224ENST00000544990 INPP5JQ15735 1006 aaPredicted RBP6.91□□□□□ -1.3
CPSF7-224ENST00000544990 CPSF6Q16630 551 aaKnown RBP eCLIP6.91□□□□□ -1.3
CPSF7-224ENST00000544990 PLEKHN1Q494U1 663 aaPredicted RBP6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 70.8 ms