RNA–Protein interactions for RNA: ENST00000544778.6

BPTF-208, Transcript of bromodomain PHD finger transcription factor, humanhuman

TSL 5

Gene BPTF, Length 7,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BPTF-208ENST00000544778 PCTPQ9UKL6 214 aa19.28■□□□□ 0.68
BPTF-208ENST00000544778 BCAS1O75363 584 aaPredicted RBP19.28■□□□□ 0.68
BPTF-208ENST00000544778 LYPLA2O95372 231 aa19.28■□□□□ 0.68
BPTF-208ENST00000544778 CHMP24386 653 aa19.28■□□□□ 0.68
BPTF-208ENST00000544778 TMEM115Q12893 351 aaPredicted RBP19.28■□□□□ 0.68
BPTF-208ENST00000544778 BTBD16Q32M84 506 aa19.28■□□□□ 0.68
BPTF-208ENST00000544778 OR4K1Q8NGD4 311 aa19.28■□□□□ 0.68
BPTF-208ENST00000544778 FBXL18Q96ME1 805 aa19.28■□□□□ 0.68
BPTF-208ENST00000544778 FBRSL1Q9HCM7 1045 aaKnown RBP19.28■□□□□ 0.68
BPTF-208ENST00000544778 SARDHQ9UL12 918 aa19.28■□□□□ 0.68
BPTF-208ENST00000544778 BCL9O00512 1426 aa19.28■□□□□ 0.68
BPTF-208ENST00000544778 PTPRMP28827 1452 aa19.28■□□□□ 0.68
BPTF-208ENST00000544778 SH3PXD2BA1X283 911 aa19.28■□□□□ 0.68
BPTF-208ENST00000544778 C1orf61Q13536 156 aa19.28■□□□□ 0.68
BPTF-208ENST00000544778 TRIM46Q7Z4K8 759 aa19.28■□□□□ 0.68
BPTF-208ENST00000544778 SAMD12Q8N8I0 201 aa19.28■□□□□ 0.68
BPTF-208ENST00000544778 NUP43Q8NFH3 380 aa19.28■□□□□ 0.68
BPTF-208ENST00000544778 OR8K5Q8NH50 307 aa19.28■□□□□ 0.68
BPTF-208ENST00000544778 OR56A3Q8NH54 315 aa19.28■□□□□ 0.68
BPTF-208ENST00000544778 KCTD13Q8WZ19 329 aa19.28■□□□□ 0.68
BPTF-208ENST00000544778 DLGAP4Q9Y2H0 992 aa19.28■□□□□ 0.68
BPTF-208ENST00000544778 AAK1Q2M2I8 961 aa19.28■□□□□ 0.68
BPTF-208ENST00000544778 FAM205BPQ63HN1 556 aa19.28■□□□□ 0.68
BPTF-208ENST00000544778 KLHDC10Q6PID8 442 aa19.28■□□□□ 0.68
BPTF-208ENST00000544778 AGTRAPQ6RW13 159 aa19.28■□□□□ 0.68
BPTF-208ENST00000544778 OXSMQ9NWU1 459 aa19.28■□□□□ 0.68
BPTF-208ENST00000544778 ZNF225Q9UK10 706 aa19.28■□□□□ 0.68
BPTF-208ENST00000544778 HS3ST4Q9Y661 456 aa19.28■□□□□ 0.68
BPTF-208ENST00000544778 SHMT2P34897 504 aa19.28■□□□□ 0.68
BPTF-208ENST00000544778 BCL2A1Q16548 175 aa19.28■□□□□ 0.68
BPTF-208ENST00000544778 TMEM175Q9BSA9 504 aa19.28■□□□□ 0.68
BPTF-208ENST00000544778 ISPDA4D126 451 aa19.27■□□□□ 0.68
BPTF-208ENST00000544778 FRKP42685 505 aaPredicted RBP19.27■□□□□ 0.68
BPTF-208ENST00000544778 GID4Q8IVV7 300 aa19.27■□□□□ 0.68
BPTF-208ENST00000544778 CANT1Q8WVQ1 401 aa19.27■□□□□ 0.68
BPTF-208ENST00000544778 LIN37Q96GY3 246 aaPredicted RBP19.27■□□□□ 0.68
BPTF-208ENST00000544778 FAM155AB1AL88 458 aaPredicted RBP19.27■□□□□ 0.68
BPTF-208ENST00000544778 G6PDP11413 515 aa19.27■□□□□ 0.68
BPTF-208ENST00000544778 EPHA1P21709 976 aa19.27■□□□□ 0.68
BPTF-208ENST00000544778 PRKACGP22612 351 aa19.27■□□□□ 0.68
BPTF-208ENST00000544778 ZNF572Q7Z3I7 529 aaPredicted RBP19.27■□□□□ 0.68
BPTF-208ENST00000544778 PCDHGA2Q9Y5H1 932 aa19.27■□□□□ 0.68
BPTF-208ENST00000544778 ARHGAP23Q9P227 1491 aa19.27■□□□□ 0.68
BPTF-208ENST00000544778 MYH11P35749 1972 aa19.27■□□□□ 0.68
BPTF-208ENST00000544778 BMP6P22004 513 aa19.27■□□□□ 0.68
BPTF-208ENST00000544778 AKR1C2P52895 323 aa19.27■□□□□ 0.68
BPTF-208ENST00000544778 PPA1Q15181 289 aa19.27■□□□□ 0.68
BPTF-208ENST00000544778 SOWAHAQ2M3V2 549 aa19.27■□□□□ 0.68
BPTF-208ENST00000544778 KDELR3O43731 214 aa19.27■□□□□ 0.68
BPTF-208ENST00000544778 BCL2L15Q5TBC7 163 aa19.27■□□□□ 0.68
BPTF-208ENST00000544778 LBX2Q6XYB7 198 aa19.27■□□□□ 0.68
BPTF-208ENST00000544778 TRAM1L1Q8N609 369 aa19.27■□□□□ 0.68
BPTF-208ENST00000544778 CLDN19Q8N6F1 224 aa19.27■□□□□ 0.68
BPTF-208ENST00000544778 TAS2R1Q9NYW7 299 aa19.27■□□□□ 0.68
BPTF-208ENST00000544778 EXOSC1Q9Y3B2 195 aaKnown RBP19.27■□□□□ 0.68
BPTF-208ENST00000544778 SLC22A2O15244 555 aa19.27■□□□□ 0.67
BPTF-208ENST00000544778 CNTN5O94779 1100 aa19.27■□□□□ 0.67
BPTF-208ENST00000544778 ZNF616Q08AN1 781 aa19.27■□□□□ 0.67
BPTF-208ENST00000544778 FAM182AQ5T1J6 154 aa19.27■□□□□ 0.67
BPTF-208ENST00000544778 TMEM107Q6UX40 140 aa19.27■□□□□ 0.67
BPTF-208ENST00000544778 OR10T2Q8NGX3 314 aa19.27■□□□□ 0.67
BPTF-208ENST00000544778 TSACCQ96A04 125 aaPredicted RBP19.27■□□□□ 0.67
BPTF-208ENST00000544778 TMEM74Q96NL1 305 aa19.27■□□□□ 0.67
BPTF-208ENST00000544778 MRPL15Q9P015 296 aaKnown RBP19.27■□□□□ 0.67
BPTF-208ENST00000544778 ZNF451Q9Y4E5 1061 aa19.27■□□□□ 0.67
BPTF-208ENST00000544778 CITO14578 2027 aa19.27■□□□□ 0.67
BPTF-208ENST00000544778 FEZF1A0PJY2 475 aa19.27■□□□□ 0.67
BPTF-208ENST00000544778 A8MT66 165 aa19.27■□□□□ 0.67
BPTF-208ENST00000544778 RBBP9O75884 186 aa19.27■□□□□ 0.67
BPTF-208ENST00000544778 ZNF81P51508 661 aa19.27■□□□□ 0.67
BPTF-208ENST00000544778 DPYSL2Q16555 572 aa19.27■□□□□ 0.67
BPTF-208ENST00000544778 COL28A1Q2UY09 1125 aa19.27■□□□□ 0.67
BPTF-208ENST00000544778 PTCHD3Q3KNS1 767 aa19.27■□□□□ 0.67
BPTF-208ENST00000544778 C22orf39Q6P5X5 142 aa19.27■□□□□ 0.67
BPTF-208ENST00000544778 KCTD18Q6PI47 426 aaPredicted RBP19.27■□□□□ 0.67
BPTF-208ENST00000544778 RELL1Q8IUW5 271 aa19.27■□□□□ 0.67
BPTF-208ENST00000544778 ASB15Q8WXK1 588 aa19.27■□□□□ 0.67
BPTF-208ENST00000544778 URM1Q9BTM9 101 aaKnown RBP19.27■□□□□ 0.67
BPTF-208ENST00000544778 CD244Q9BZW8 370 aa19.27■□□□□ 0.67
BPTF-208ENST00000544778 IQGAP1P46940 1657 aa19.26■□□□□ 0.67
BPTF-208ENST00000544778 IFNA4P05014 189 aa19.26■□□□□ 0.67
BPTF-208ENST00000544778 IL3P08700 152 aa19.26■□□□□ 0.67
BPTF-208ENST00000544778 JUNDP17535 347 aa19.26■□□□□ 0.67
BPTF-208ENST00000544778 KCNC4Q03721 635 aa19.26■□□□□ 0.67
BPTF-208ENST00000544778 KCNA7Q96RP8 456 aa19.26■□□□□ 0.67
BPTF-208ENST00000544778 MYEF2Q9P2K5 600 aaKnown RBP19.26■□□□□ 0.67
BPTF-208ENST00000544778 A0A1W2PP55 124 aa19.26■□□□□ 0.67
BPTF-208ENST00000544778 PAK4O96013 591 aaPredicted RBP19.26■□□□□ 0.67
BPTF-208ENST00000544778 UQCRC2P22695 453 aa19.26■□□□□ 0.67
BPTF-208ENST00000544778 ZNF542PQ5EBM4 170 aa19.26■□□□□ 0.67
BPTF-208ENST00000544778 TPRG1Q6ZUI0 275 aa19.26■□□□□ 0.67
BPTF-208ENST00000544778 MYRFLQ96LU7 910 aa19.26■□□□□ 0.67
BPTF-208ENST00000544778 P2RY13Q9BPV8 354 aa19.26■□□□□ 0.67
BPTF-208ENST00000544778 SULT4A1Q9BR01 284 aa19.26■□□□□ 0.67
BPTF-208ENST00000544778 FBRSQ9HAH7 460 aa19.26■□□□□ 0.67
BPTF-208ENST00000544778 EEF1E1O43324 174 aaKnown RBP19.26■□□□□ 0.67
BPTF-208ENST00000544778 RPS27LQ71UM5 84 aaKnown RBP19.26■□□□□ 0.67
BPTF-208ENST00000544778 TRIB2Q92519 343 aa19.26■□□□□ 0.67
BPTF-208ENST00000544778 ABCA9Q8IUA7 1624 aa19.26■□□□□ 0.67
BPTF-208ENST00000544778 UNC119BA6NIH7 251 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms