RNA–Protein interactions for RNA: ENST00000544484.5

CHD4-211, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene CHD4, Length 6,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-211ENST00000544484 POLE3Q9NRF9 147 aa12.27□□□□□ -0.45
CHD4-211ENST00000544484 SPATA6Q9NWH7 488 aaPredicted RBP12.27□□□□□ -0.45
CHD4-211ENST00000544484 HCN2Q9UL51 889 aa12.27□□□□□ -0.45
CHD4-211ENST00000544484 HCKP08631 526 aa12.27□□□□□ -0.45
CHD4-211ENST00000544484 CELP19835 753 aa12.27□□□□□ -0.45
CHD4-211ENST00000544484 HTR1EP28566 365 aa12.27□□□□□ -0.45
CHD4-211ENST00000544484 CBFBQ13951 182 aa12.27□□□□□ -0.45
CHD4-211ENST00000544484 DEFB110Q30KQ9 67 aa12.27□□□□□ -0.45
CHD4-211ENST00000544484 ABCA11PQ4W5N1 156 aa12.27□□□□□ -0.45
CHD4-211ENST00000544484 GALNT12Q8IXK2 581 aa12.27□□□□□ -0.45
CHD4-211ENST00000544484 CCDC59Q9P031 241 aaKnown RBP12.27□□□□□ -0.45
CHD4-211ENST00000544484 ITGB1BP2Q9UKP3 347 aa12.27□□□□□ -0.45
CHD4-211ENST00000544484 MYH3P11055 1940 aa12.27□□□□□ -0.45
CHD4-211ENST00000544484 RAB2AP61019 212 aa12.27□□□□□ -0.45
CHD4-211ENST00000544484 ZNF234Q14588 700 aa12.27□□□□□ -0.45
CHD4-211ENST00000544484 C1orf189Q5VU69 101 aa12.27□□□□□ -0.45
CHD4-211ENST00000544484 GPALPP1Q8IXQ4 340 aa12.27□□□□□ -0.45
CHD4-211ENST00000544484 PTERQ96BW5 349 aa12.27□□□□□ -0.45
CHD4-211ENST00000544484 ERMAPQ96PL5 475 aaPredicted RBP12.27□□□□□ -0.45
CHD4-211ENST00000544484 TRIB3Q96RU7 358 aa12.27□□□□□ -0.45
CHD4-211ENST00000544484 CMKLR1Q99788 373 aa12.27□□□□□ -0.45
CHD4-211ENST00000544484 WACQ9BTA9 647 aa12.27□□□□□ -0.45
CHD4-211ENST00000544484 CCM2LQ9NUG4 571 aaPredicted RBP12.27□□□□□ -0.45
CHD4-211ENST00000544484 RGPD5Q99666 1765 aa12.26□□□□□ -0.45
CHD4-211ENST00000544484 HYKKA2RU49 373 aa12.26□□□□□ -0.45
CHD4-211ENST00000544484 EMC8O43402 210 aa12.26□□□□□ -0.45
CHD4-211ENST00000544484 CDC40O60508 579 aaKnown RBP eCLIP12.26□□□□□ -0.453e-6■■■□□ 18.9
CHD4-211ENST00000544484 EEDO75530 441 aaKnown RBP12.26□□□□□ -0.45
CHD4-211ENST00000544484 TIMP1P01033 207 aa12.26□□□□□ -0.45
CHD4-211ENST00000544484 SNTA1Q13424 505 aa12.26□□□□□ -0.45
CHD4-211ENST00000544484 ZNF551Q7Z340 670 aaPredicted RBP12.26□□□□□ -0.45
CHD4-211ENST00000544484 MAL2Q969L2 176 aa12.26□□□□□ -0.45
CHD4-211ENST00000544484 PGAP3Q96FM1 320 aaPredicted RBP12.26□□□□□ -0.45
CHD4-211ENST00000544484 SMIM14Q96QK8 99 aa12.26□□□□□ -0.45
CHD4-211ENST00000544484 C14orf105Q9NVL8 296 aa12.26□□□□□ -0.45
CHD4-211ENST00000544484 PCDHB3Q9Y5E6 796 aa12.26□□□□□ -0.45
CHD4-211ENST00000544484 AKR1D1P51857 326 aa12.26□□□□□ -0.45
CHD4-211ENST00000544484 TMEM225Q6GV28 225 aa12.26□□□□□ -0.45
CHD4-211ENST00000544484 SLITRK4Q8IW52 837 aa12.26□□□□□ -0.45
CHD4-211ENST00000544484 RASGEF1AQ8N9B8 481 aa12.26□□□□□ -0.45
CHD4-211ENST00000544484 RBP7Q96R05 134 aa12.26□□□□□ -0.45
CHD4-211ENST00000544484 ZNF224Q9NZL3 707 aa12.26□□□□□ -0.45
CHD4-211ENST00000544484 SCN11AQ9UI33 1791 aa12.26□□□□□ -0.45
CHD4-211ENST00000544484 MYH15Q9Y2K3 1946 aa12.26□□□□□ -0.45
CHD4-211ENST00000544484 A0A1W2PPK0 400 aa12.26□□□□□ -0.45
CHD4-211ENST00000544484 ARSAP15289 507 aa12.26□□□□□ -0.45
CHD4-211ENST00000544484 ZNF182P17025 639 aaPredicted RBP12.26□□□□□ -0.45
CHD4-211ENST00000544484 ENPP6Q6UWR7 440 aa12.26□□□□□ -0.45
CHD4-211ENST00000544484 NSMAFQ92636 917 aa12.26□□□□□ -0.45
CHD4-211ENST00000544484 RTP4Q96DX8 246 aa12.26□□□□□ -0.45
CHD4-211ENST00000544484 APIPQ96GX9 242 aa12.26□□□□□ -0.45
CHD4-211ENST00000544484 MS4A4AQ96JQ5 239 aa12.26□□□□□ -0.45
CHD4-211ENST00000544484 IGSF5Q9NSI5 407 aa12.26□□□□□ -0.45
CHD4-211ENST00000544484 MKLN1Q9UL63 735 aa12.26□□□□□ -0.45
CHD4-211ENST00000544484 IFT52Q9Y366 437 aa12.26□□□□□ -0.45
CHD4-211ENST00000544484 A0A1W2PPL8 197 aa12.26□□□□□ -0.45
CHD4-211ENST00000544484 C1orf226A1L170 272 aa12.26□□□□□ -0.45
CHD4-211ENST00000544484 OR2B3O76000 313 aa12.26□□□□□ -0.45
CHD4-211ENST00000544484 IL33O95760 270 aa12.26□□□□□ -0.45
CHD4-211ENST00000544484 NAA10P41227 235 aaPredicted RBP12.26□□□□□ -0.45
CHD4-211ENST00000544484 SLC15A1P46059 708 aa12.26□□□□□ -0.45
CHD4-211ENST00000544484 CCINQ13939 588 aa12.26□□□□□ -0.45
CHD4-211ENST00000544484 DSG2Q14126 1118 aa12.26□□□□□ -0.45
CHD4-211ENST00000544484 PRAMEF17Q5VTA0 474 aa12.26□□□□□ -0.45
CHD4-211ENST00000544484 VTCN1Q7Z7D3 282 aa12.26□□□□□ -0.45
CHD4-211ENST00000544484 FOXRED2Q8IWF2 684 aa12.26□□□□□ -0.45
CHD4-211ENST00000544484 LRRC25Q8N386 305 aaPredicted RBP12.26□□□□□ -0.45
CHD4-211ENST00000544484 CEP76Q8TAP6 659 aa12.26□□□□□ -0.45
CHD4-211ENST00000544484 ORAI3Q9BRQ5 295 aa12.26□□□□□ -0.45
CHD4-211ENST00000544484 PRODH2Q9UF12 536 aa12.26□□□□□ -0.45
CHD4-211ENST00000544484 TMEM5Q9Y2B1 443 aa12.26□□□□□ -0.45
CHD4-211ENST00000544484 GPR39O43194 453 aa12.26□□□□□ -0.45
CHD4-211ENST00000544484 SPARCP09486 303 aa12.26□□□□□ -0.45
CHD4-211ENST00000544484 HSD3B1P14060 373 aa12.26□□□□□ -0.45
CHD4-211ENST00000544484 HSD3B2P26439 372 aa12.26□□□□□ -0.45
CHD4-211ENST00000544484 PMS2P3Q13401 168 aa12.26□□□□□ -0.45
CHD4-211ENST00000544484 LRIT3Q3SXY7 679 aa12.26□□□□□ -0.45
CHD4-211ENST00000544484 FBXO46Q6PJ61 603 aaPredicted RBP12.26□□□□□ -0.45
CHD4-211ENST00000544484 MFSD2AQ8NA29 543 aa12.26□□□□□ -0.45
CHD4-211ENST00000544484 OR52P1PQ8NH57 321 aa12.26□□□□□ -0.45
CHD4-211ENST00000544484 TMEM125Q96AQ2 219 aa12.26□□□□□ -0.45
CHD4-211ENST00000544484 MOAP1Q96BY2 351 aa12.26□□□□□ -0.45
CHD4-211ENST00000544484 PIP5K1AQ99755 562 aa12.26□□□□□ -0.45
CHD4-211ENST00000544484 BEX2Q9BXY8 128 aa12.26□□□□□ -0.45
CHD4-211ENST00000544484 BEX1Q9HBH7 125 aa12.26□□□□□ -0.45
CHD4-211ENST00000544484 ANKRD12Q6UB98 2062 aa12.25□□□□□ -0.45
CHD4-211ENST00000544484 CNTRLQ7Z7A1 2325 aa12.25□□□□□ -0.45
CHD4-211ENST00000544484 G3V2L1 256 aa12.25□□□□□ -0.45
CHD4-211ENST00000544484 PRH1P02810 166 aa12.25□□□□□ -0.45
CHD4-211ENST00000544484 LAMP1P11279 417 aa12.25□□□□□ -0.45
CHD4-211ENST00000544484 C5AR1P21730 350 aa12.25□□□□□ -0.45
CHD4-211ENST00000544484 FADDQ13158 208 aa12.25□□□□□ -0.45
CHD4-211ENST00000544484 SPATS1Q496A3 300 aa12.25□□□□□ -0.45
CHD4-211ENST00000544484 GTDC1Q4AE62 458 aa12.25□□□□□ -0.45
CHD4-211ENST00000544484 TCEAL8Q8IYN2 117 aa12.25□□□□□ -0.45
CHD4-211ENST00000544484 NCDNQ9UBB6 729 aa12.25□□□□□ -0.45
CHD4-211ENST00000544484 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.25□□□□□ -0.45
CHD4-211ENST00000544484 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.25□□□□□ -0.45
CHD4-211ENST00000544484 H3BQ06 376 aaPredicted RBP12.25□□□□□ -0.45
CHD4-211ENST00000544484 CLDN8P56748 225 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms