RNA–Protein interactions for RNA: ENST00000543995.5

TNFRSF1A-216, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 1,531 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-216ENST00000543995 EPHA3P29320 983 aa13.61□□□□□ -0.23
TNFRSF1A-216ENST00000543995 STX4Q12846 297 aa13.61□□□□□ -0.23
TNFRSF1A-216ENST00000543995 HEPACAMQ14CZ8 416 aa13.61□□□□□ -0.23
TNFRSF1A-216ENST00000543995 UGT8Q16880 541 aa13.61□□□□□ -0.23
TNFRSF1A-216ENST00000543995 SLC9B1Q4ZJI4 515 aa13.61□□□□□ -0.23
TNFRSF1A-216ENST00000543995 RIPOR1Q6ZS17 1223 aa13.61□□□□□ -0.23
TNFRSF1A-216ENST00000543995 MAVSQ7Z434 540 aa13.61□□□□□ -0.23
TNFRSF1A-216ENST00000543995 PLPP5Q8NEB5 264 aa13.61□□□□□ -0.23
TNFRSF1A-216ENST00000543995 TANKQ92844 425 aa13.61□□□□□ -0.23
TNFRSF1A-216ENST00000543995 TSLPQ969D9 159 aa13.61□□□□□ -0.23
TNFRSF1A-216ENST00000543995 TSSK3Q96PN8 268 aa13.61□□□□□ -0.23
TNFRSF1A-216ENST00000543995 CPNE5Q9HCH3 593 aa13.61□□□□□ -0.23
TNFRSF1A-216ENST00000543995 NPHS2Q9NP85 383 aa13.61□□□□□ -0.23
TNFRSF1A-216ENST00000543995 FGFR1OP2Q9NVK5 253 aa13.61□□□□□ -0.23
TNFRSF1A-216ENST00000543995 NOP53Q9NZM5 478 aaKnown RBP13.61□□□□□ -0.23
TNFRSF1A-216ENST00000543995 SSUH2Q9Y2M2 353 aa13.61□□□□□ -0.23
TNFRSF1A-216ENST00000543995 FRYQ5TBA9 3013 aa13.61□□□□□ -0.23
TNFRSF1A-216ENST00000543995 PEX12O00623 359 aa13.6□□□□□ -0.23
TNFRSF1A-216ENST00000543995 ZNF195O14628 629 aa13.6□□□□□ -0.23
TNFRSF1A-216ENST00000543995 CTNSO60931 367 aa13.6□□□□□ -0.23
TNFRSF1A-216ENST00000543995 PRR35P0CG20 571 aa13.6□□□□□ -0.23
TNFRSF1A-216ENST00000543995 BCKDHAP12694 445 aa13.6□□□□□ -0.23
TNFRSF1A-216ENST00000543995 SDC1P18827 310 aa13.6□□□□□ -0.23
TNFRSF1A-216ENST00000543995 PPP2R1BP30154 601 aa13.6□□□□□ -0.23
TNFRSF1A-216ENST00000543995 EFNA3P52797 238 aa13.6□□□□□ -0.23
TNFRSF1A-216ENST00000543995 AQP5P55064 265 aa13.6□□□□□ -0.23
TNFRSF1A-216ENST00000543995 ERVK-8P63133 956 aa13.6□□□□□ -0.23
TNFRSF1A-216ENST00000543995 EMX2Q04743 252 aa13.6□□□□□ -0.23
TNFRSF1A-216ENST00000543995 C2orf80Q0P641 193 aa13.6□□□□□ -0.23
TNFRSF1A-216ENST00000543995 CDC20Q12834 499 aa13.6□□□□□ -0.23
TNFRSF1A-216ENST00000543995 SMU1Q2TAY7 513 aa13.6□□□□□ -0.23
TNFRSF1A-216ENST00000543995 ATP1A1-AS1Q5TC04 95 aa13.6□□□□□ -0.23
TNFRSF1A-216ENST00000543995 IL23RQ5VWK5 629 aa13.6□□□□□ -0.23
TNFRSF1A-216ENST00000543995 OR52E8Q6IFG1 317 aa13.6□□□□□ -0.23
TNFRSF1A-216ENST00000543995 EPGNQ6UW88 154 aa13.6□□□□□ -0.23
TNFRSF1A-216ENST00000543995 ACAD11Q709F0 780 aa13.6□□□□□ -0.23
TNFRSF1A-216ENST00000543995 LARP4Q71RC2 724 aaKnown RBP eCLIP13.6□□□□□ -0.231e-7■□□□□ 11.3
TNFRSF1A-216ENST00000543995 MED25Q71SY5 747 aa13.6□□□□□ -0.23
TNFRSF1A-216ENST00000543995 LIX1Q8N485 282 aa13.6□□□□□ -0.23
TNFRSF1A-216ENST00000543995 CLHC1Q8NHS4 586 aa13.6□□□□□ -0.23
TNFRSF1A-216ENST00000543995 VPS50Q96JG6 964 aa13.6□□□□□ -0.23
TNFRSF1A-216ENST00000543995 FCRL1Q96LA6 429 aa13.6□□□□□ -0.23
TNFRSF1A-216ENST00000543995 TRIM55Q9BYV6 548 aa13.6□□□□□ -0.23
TNFRSF1A-216ENST00000543995 MYNNQ9NPC7 610 aa13.6□□□□□ -0.23
TNFRSF1A-216ENST00000543995 MIEF1Q9NQG6 463 aa13.6□□□□□ -0.23
TNFRSF1A-216ENST00000543995 NECTIN3Q9NQS3 549 aa13.6□□□□□ -0.23
TNFRSF1A-216ENST00000543995 C19orf25Q9UFG5 118 aaPredicted RBP13.6□□□□□ -0.23
TNFRSF1A-216ENST00000543995 BAIAP2L1Q9UHR4 511 aa13.6□□□□□ -0.23
TNFRSF1A-216ENST00000543995 PCDHA9Q9Y5H5 950 aa13.6□□□□□ -0.23
TNFRSF1A-216ENST00000543995 CROCCQ5TZA2 2017 aa13.6□□□□□ -0.23
TNFRSF1A-216ENST00000543995 PCDH17O14917 1159 aa13.59□□□□□ -0.23
TNFRSF1A-216ENST00000543995 PGRMC2O15173 223 aa13.59□□□□□ -0.23
TNFRSF1A-216ENST00000543995 TROVE2P10155 538 aaKnown RBP eCLIP13.59□□□□□ -0.23
TNFRSF1A-216ENST00000543995 PRPS2P11908 318 aa13.59□□□□□ -0.23
TNFRSF1A-216ENST00000543995 ACPPP15309 386 aa13.59□□□□□ -0.23
TNFRSF1A-216ENST00000543995 TACR1P25103 407 aa13.59□□□□□ -0.23
TNFRSF1A-216ENST00000543995 CXADRP78310 365 aa13.59□□□□□ -0.23
TNFRSF1A-216ENST00000543995 ID2Q02363 134 aa13.59□□□□□ -0.23
TNFRSF1A-216ENST00000543995 FOLH1Q04609 750 aa13.59□□□□□ -0.23
TNFRSF1A-216ENST00000543995 EEF1A2Q05639 463 aaKnown RBP13.59□□□□□ -0.23
TNFRSF1A-216ENST00000543995 VAC14Q08AM6 782 aa13.59□□□□□ -0.23
TNFRSF1A-216ENST00000543995 LANCL3Q6ZV70 420 aa13.59□□□□□ -0.23
TNFRSF1A-216ENST00000543995 PPP1R32Q7Z5V6 425 aa13.59□□□□□ -0.23
TNFRSF1A-216ENST00000543995 ANKRD37Q7Z713 158 aa13.59□□□□□ -0.23
TNFRSF1A-216ENST00000543995 MRGPREQ86SM8 312 aa13.59□□□□□ -0.23
TNFRSF1A-216ENST00000543995 SCUBE1Q8IWY4 988 aa13.59□□□□□ -0.23
TNFRSF1A-216ENST00000543995 OR4N5Q8IXE1 308 aa13.59□□□□□ -0.23
TNFRSF1A-216ENST00000543995 PARP9Q8IXQ6 854 aa13.59□□□□□ -0.23
TNFRSF1A-216ENST00000543995 LRRC34Q8IZ02 419 aa13.59□□□□□ -0.23
TNFRSF1A-216ENST00000543995 MMP21Q8N119 569 aa13.59□□□□□ -0.23
TNFRSF1A-216ENST00000543995 CEP70Q8NHQ1 597 aa13.59□□□□□ -0.23
TNFRSF1A-216ENST00000543995 ADAMTS17Q8TE56 1095 aa13.59□□□□□ -0.23
TNFRSF1A-216ENST00000543995 UCN3Q969E3 161 aa13.59□□□□□ -0.23
TNFRSF1A-216ENST00000543995 GFM2Q969S9 779 aaKnown RBP13.59□□□□□ -0.23
TNFRSF1A-216ENST00000543995 NACC2Q96BF6 587 aa13.59□□□□□ -0.23
TNFRSF1A-216ENST00000543995 C8orf44Q96CB5 159 aa13.59□□□□□ -0.23
TNFRSF1A-216ENST00000543995 MAELQ96JY0 434 aaKnown RBP13.59□□□□□ -0.23
TNFRSF1A-216ENST00000543995 EGLN2Q96KS0 407 aa13.59□□□□□ -0.23
TNFRSF1A-216ENST00000543995 IP6K3Q96PC2 410 aa13.59□□□□□ -0.23
TNFRSF1A-216ENST00000543995 P4HTMQ9NXG6 502 aa13.59□□□□□ -0.23
TNFRSF1A-216ENST00000543995 C5AR2Q9P296 337 aa13.59□□□□□ -0.23
TNFRSF1A-216ENST00000543995 HEY2Q9UBP5 337 aa13.59□□□□□ -0.23
TNFRSF1A-216ENST00000543995 DCTN4Q9UJW0 460 aa13.59□□□□□ -0.23
TNFRSF1A-216ENST00000543995 PSME2Q9UL46 239 aa13.59□□□□□ -0.23
TNFRSF1A-216ENST00000543995 WBP11Q9Y2W2 641 aaKnown RBP13.59□□□□□ -0.23
TNFRSF1A-216ENST00000543995 HS3ST3B1Q9Y662 390 aa13.59□□□□□ -0.23
TNFRSF1A-216ENST00000543995 MYOCOSA0A1B0GUC4 107 aa13.59□□□□□ -0.23
TNFRSF1A-216ENST00000543995 SRRM3A6NNA2 597 aaPredicted RBP13.59□□□□□ -0.23
TNFRSF1A-216ENST00000543995 WASHC1A8K0Z3 465 aa13.59□□□□□ -0.23
TNFRSF1A-216ENST00000543995 K7ENP7 123 aa13.59□□□□□ -0.23
TNFRSF1A-216ENST00000543995 SOCS6O14544 535 aa13.59□□□□□ -0.23
TNFRSF1A-216ENST00000543995 FGF17O60258 216 aa13.59□□□□□ -0.23
TNFRSF1A-216ENST00000543995 ERAL1O75616 437 aaKnown RBP13.59□□□□□ -0.23
TNFRSF1A-216ENST00000543995 LRATO95237 230 aa13.59□□□□□ -0.23
TNFRSF1A-216ENST00000543995 IFNA16P05015 189 aa13.59□□□□□ -0.23
TNFRSF1A-216ENST00000543995 FURINP09958 794 aa13.59□□□□□ -0.23
TNFRSF1A-216ENST00000543995 DRD2P14416 443 aa13.59□□□□□ -0.23
TNFRSF1A-216ENST00000543995 ALOX15P16050 662 aaPredicted RBP13.59□□□□□ -0.23
TNFRSF1A-216ENST00000543995 PIK3R1P27986 724 aa13.59□□□□□ -0.23
TNFRSF1A-216ENST00000543995 ASMTP46597 345 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms