RNA–Protein interactions for RNA: ENST00000543397.1

SRGAP1-206, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

TSL 1 (best) BASIC

Gene SRGAP1, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-206ENST00000543397 KCNA7Q96RP8 456 aa6.62□□□□□ -1.35
SRGAP1-206ENST00000543397 UBE2ZQ9H832 354 aaPredicted RBP6.62□□□□□ -1.35
SRGAP1-206ENST00000543397 MARK1Q9P0L2 795 aa6.62□□□□□ -1.35
SRGAP1-206ENST00000543397 DNAJB9Q9UBS3 223 aa6.62□□□□□ -1.35
SRGAP1-206ENST00000543397 GPC6Q9Y625 555 aaPredicted RBP6.62□□□□□ -1.35
SRGAP1-206ENST00000543397 MYH6P13533 1939 aa6.62□□□□□ -1.35
SRGAP1-206ENST00000543397 YKT6O15498 198 aa6.62□□□□□ -1.35
SRGAP1-206ENST00000543397 KHDRBS3O75525 346 aaKnown RBP6.62□□□□□ -1.35
SRGAP1-206ENST00000543397 FARS2O95363 451 aaKnown RBP6.62□□□□□ -1.35
SRGAP1-206ENST00000543397 ZBTB11O95625 1053 aaPredicted RBP6.62□□□□□ -1.35
SRGAP1-206ENST00000543397 RAC2P15153 192 aa6.62□□□□□ -1.35
SRGAP1-206ENST00000543397 HOXD11P31277 338 aaPredicted RBP6.62□□□□□ -1.35
SRGAP1-206ENST00000543397 ARSDP51689 593 aa6.62□□□□□ -1.35
SRGAP1-206ENST00000543397 GSCP56915 257 aaPredicted RBP6.62□□□□□ -1.35
SRGAP1-206ENST00000543397 FCHO2Q0JRZ9 810 aa6.62□□□□□ -1.35
SRGAP1-206ENST00000543397 DEFB110Q30KQ9 67 aa6.62□□□□□ -1.35
SRGAP1-206ENST00000543397 TMEM135Q86UB9 458 aa6.62□□□□□ -1.35
SRGAP1-206ENST00000543397 TP53INP2Q8IXH6 220 aa6.62□□□□□ -1.35
SRGAP1-206ENST00000543397 PARP8Q8N3A8 854 aa6.62□□□□□ -1.35
SRGAP1-206ENST00000543397 COQ8BQ96D53 544 aa6.62□□□□□ -1.35
SRGAP1-206ENST00000543397 ZFYVE21Q9BQ24 234 aa6.62□□□□□ -1.35
SRGAP1-206ENST00000543397 RTP3Q9BQQ7 232 aa6.62□□□□□ -1.35
SRGAP1-206ENST00000543397 PPP4R1LQ9P1A2 415 aa6.62□□□□□ -1.35
SRGAP1-206ENST00000543397 DAPK2Q9UIK4 370 aa6.62□□□□□ -1.35
SRGAP1-206ENST00000543397 SCAMP2O15127 329 aaKnown RBP6.62□□□□□ -1.35
SRGAP1-206ENST00000543397 SCO2O43819 266 aa6.62□□□□□ -1.35
SRGAP1-206ENST00000543397 CD1DP15813 335 aa6.62□□□□□ -1.35
SRGAP1-206ENST00000543397 PTNP21246 168 aa6.62□□□□□ -1.35
SRGAP1-206ENST00000543397 GSTM3P21266 225 aa6.62□□□□□ -1.35
SRGAP1-206ENST00000543397 MAOBP27338 520 aa6.62□□□□□ -1.35
SRGAP1-206ENST00000543397 PPP2R2BQ00005 443 aa6.62□□□□□ -1.35
SRGAP1-206ENST00000543397 HSF2Q03933 536 aa6.62□□□□□ -1.35
SRGAP1-206ENST00000543397 ABHD18Q0P651 414 aa6.62□□□□□ -1.35
SRGAP1-206ENST00000543397 ADGRE1Q14246 886 aa6.62□□□□□ -1.35
SRGAP1-206ENST00000543397 RAB6CQ53S08 254 aa6.62□□□□□ -1.35
SRGAP1-206ENST00000543397 NOXRED1Q6NXP6 359 aa6.62□□□□□ -1.35
SRGAP1-206ENST00000543397 NCCRP1Q6ZVX7 275 aaPredicted RBP6.62□□□□□ -1.35
SRGAP1-206ENST00000543397 AHSA2Q719I0 299 aa6.62□□□□□ -1.35
SRGAP1-206ENST00000543397 RPS27LQ71UM5 84 aaKnown RBP6.62□□□□□ -1.35
SRGAP1-206ENST00000543397 DPPA4Q7L190 304 aa6.62□□□□□ -1.35
SRGAP1-206ENST00000543397 GPR149Q86SP6 731 aa6.62□□□□□ -1.35
SRGAP1-206ENST00000543397 CBARPQ8N350 705 aaPredicted RBP6.62□□□□□ -1.35
SRGAP1-206ENST00000543397 OR10G2Q8NGC3 310 aa6.62□□□□□ -1.35
SRGAP1-206ENST00000543397 NFKBIDQ8NI38 313 aa6.62□□□□□ -1.35
SRGAP1-206ENST00000543397 TMCO6Q96DC7 493 aa6.62□□□□□ -1.35
SRGAP1-206ENST00000543397 RBP7Q96R05 134 aa6.62□□□□□ -1.35
SRGAP1-206ENST00000543397 OR52B2Q96RD2 323 aa6.62□□□□□ -1.35
SRGAP1-206ENST00000543397 F2RL3Q96RI0 385 aa6.62□□□□□ -1.35
SRGAP1-206ENST00000543397 CLCC1Q96S66 551 aa6.62□□□□□ -1.35
SRGAP1-206ENST00000543397 PHF7Q9BWX1 381 aaPredicted RBP6.62□□□□□ -1.35
SRGAP1-206ENST00000543397 RAB6CQ9H0N0 254 aa6.62□□□□□ -1.35
SRGAP1-206ENST00000543397 TPK1Q9H3S4 243 aa6.62□□□□□ -1.35
SRGAP1-206ENST00000543397 RPF2Q9H7B2 306 aaKnown RBP6.62□□□□□ -1.35
SRGAP1-206ENST00000543397 TMEM184CQ9NVA4 438 aa6.62□□□□□ -1.35
SRGAP1-206ENST00000543397 MARCH5Q9NX47 278 aa6.62□□□□□ -1.35
SRGAP1-206ENST00000543397 NKIRAS2Q9NYR9 191 aa6.62□□□□□ -1.35
SRGAP1-206ENST00000543397 USP3Q9Y6I4 520 aa6.62□□□□□ -1.35
SRGAP1-206ENST00000543397 TCHHQ07283 1943 aa6.61□□□□□ -1.35
SRGAP1-206ENST00000543397 SLC30A4O14863 429 aa6.61□□□□□ -1.35
SRGAP1-206ENST00000543397 PRODHO43272 600 aa6.61□□□□□ -1.35
SRGAP1-206ENST00000543397 SSX5O60225 188 aa6.61□□□□□ -1.35
SRGAP1-206ENST00000543397 P04436 131 aa6.61□□□□□ -1.35
SRGAP1-206ENST00000543397 NELFEP18615 380 aaKnown RBP6.61□□□□□ -1.35
SRGAP1-206ENST00000543397 PRKACBP22694 351 aa6.61□□□□□ -1.35
SRGAP1-206ENST00000543397 HSD11B1P28845 292 aa6.61□□□□□ -1.35
SRGAP1-206ENST00000543397 HLA-FP30511 346 aa6.61□□□□□ -1.35
SRGAP1-206ENST00000543397 TIA1P31483 386 aaKnown RBP eCLIP6.61□□□□□ -1.35
SRGAP1-206ENST00000543397 CBX5P45973 191 aa6.61□□□□□ -1.35
SRGAP1-206ENST00000543397 UFM1P61960 85 aa6.61□□□□□ -1.35
SRGAP1-206ENST00000543397 STK11Q15831 433 aa6.61□□□□□ -1.35
SRGAP1-206ENST00000543397 NNATQ16517 81 aa6.61□□□□□ -1.35
SRGAP1-206ENST00000543397 CLEC12AQ5QGZ9 265 aa6.61□□□□□ -1.35
SRGAP1-206ENST00000543397 SLC2A7Q6PXP3 512 aa6.61□□□□□ -1.35
SRGAP1-206ENST00000543397 NXPE4Q6UWF7 544 aa6.61□□□□□ -1.35
SRGAP1-206ENST00000543397 IGDCC3Q8IVU1 814 aa6.61□□□□□ -1.35
SRGAP1-206ENST00000543397 PLPP6Q8IY26 295 aa6.61□□□□□ -1.35
SRGAP1-206ENST00000543397 LINC00471Q8N535 108 aa6.61□□□□□ -1.35
SRGAP1-206ENST00000543397 CHST4Q8NCG5 386 aa6.61□□□□□ -1.35
SRGAP1-206ENST00000543397 UBASH3BQ8TF42 649 aa6.61□□□□□ -1.35
SRGAP1-206ENST00000543397 DPF1Q92782 380 aa6.61□□□□□ -1.35
SRGAP1-206ENST00000543397 FCRL3Q96P31 734 aaPredicted RBP6.61□□□□□ -1.35
SRGAP1-206ENST00000543397 KCNK13Q9HB14 408 aa6.61□□□□□ -1.35
SRGAP1-206ENST00000543397 TIGARQ9NQ88 270 aa6.61□□□□□ -1.35
SRGAP1-206ENST00000543397 SLC35C2Q9NQQ7 365 aa6.61□□□□□ -1.35
SRGAP1-206ENST00000543397 MCUBQ9NWR8 336 aa6.61□□□□□ -1.35
SRGAP1-206ENST00000543397 BTBD3Q9Y2F9 522 aa6.61□□□□□ -1.35
SRGAP1-206ENST00000543397 ACTL7AQ9Y615 435 aa6.61□□□□□ -1.35
SRGAP1-206ENST00000543397 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.61□□□□□ -1.35
SRGAP1-206ENST00000543397 HYKKA2RU49 373 aa6.61□□□□□ -1.35
SRGAP1-206ENST00000543397 SOX1O00570 391 aaPredicted RBP6.61□□□□□ -1.35
SRGAP1-206ENST00000543397 ENSAO43768 121 aaKnown RBP6.61□□□□□ -1.35
SRGAP1-206ENST00000543397 IDH3BO43837 385 aa6.61□□□□□ -1.35
SRGAP1-206ENST00000543397 SOX30O94993 753 aa6.61□□□□□ -1.35
SRGAP1-206ENST00000543397 HOXA9P31269 272 aa6.61□□□□□ -1.35
SRGAP1-206ENST00000543397 GABRA3P34903 492 aa6.61□□□□□ -1.35
SRGAP1-206ENST00000543397 CTBP2P56545 445 aa6.61□□□□□ -1.35
SRGAP1-206ENST00000543397 ZNF846Q147U1 533 aa6.61□□□□□ -1.35
SRGAP1-206ENST00000543397 TMEM225Q6GV28 225 aa6.61□□□□□ -1.35
SRGAP1-206ENST00000543397 GPR153Q6NV75 609 aa6.61□□□□□ -1.35
SRGAP1-206ENST00000543397 RANBP10Q6VN20 620 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms