RNA–Protein interactions for RNA: ENST00000542557.5

PTPRO-208, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRO, Length 2,946 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-208ENST00000542557 VIPP01282 170 aa6.23□□□□□ -1.41
PTPRO-208ENST00000542557 LCKP06239 509 aa6.23□□□□□ -1.41
PTPRO-208ENST00000542557 TFPTP0C1Z6 253 aa6.23□□□□□ -1.41
PTPRO-208ENST00000542557 SLC35G4P0C7Q5 338 aa6.23□□□□□ -1.41
PTPRO-208ENST00000542557 OCM2P0CE71 109 aa6.23□□□□□ -1.41
PTPRO-208ENST00000542557 OCMP0CE72 109 aaPredicted RBP6.23□□□□□ -1.41
PTPRO-208ENST00000542557 MAGEA8P43361 318 aa6.23□□□□□ -1.41
PTPRO-208ENST00000542557 CASP9P55211 416 aa6.23□□□□□ -1.41
PTPRO-208ENST00000542557 TUBA1BP68363 451 aa6.23□□□□□ -1.41
PTPRO-208ENST00000542557 TBC1D25Q3MII6 688 aa6.23□□□□□ -1.41
PTPRO-208ENST00000542557 FBXO43Q4G163 708 aa6.23□□□□□ -1.41
PTPRO-208ENST00000542557 CEACAM20Q6UY09 585 aa6.23□□□□□ -1.41
PTPRO-208ENST00000542557 Q6ZPB1 254 aaPredicted RBP6.23□□□□□ -1.41
PTPRO-208ENST00000542557 TUBA1AQ71U36 451 aa6.23□□□□□ -1.41
PTPRO-208ENST00000542557 ZBTB46Q86UZ6 589 aa6.23□□□□□ -1.41
PTPRO-208ENST00000542557 MMP21Q8N119 569 aa6.23□□□□□ -1.41
PTPRO-208ENST00000542557 MFSD4AQ8N468 514 aa6.23□□□□□ -1.41
PTPRO-208ENST00000542557 RAB42Q8N4Z0 105 aa6.23□□□□□ -1.41
PTPRO-208ENST00000542557 TMCO5AQ8N6Q1 288 aa6.23□□□□□ -1.41
PTPRO-208ENST00000542557 MINDY2Q8NBR6 621 aa6.23□□□□□ -1.41
PTPRO-208ENST00000542557 OR6Q1Q8NGQ2 317 aa6.23□□□□□ -1.41
PTPRO-208ENST00000542557 C9orf43Q8TAL5 461 aaPredicted RBP6.23□□□□□ -1.41
PTPRO-208ENST00000542557 GGHQ92820 318 aa6.23□□□□□ -1.41
PTPRO-208ENST00000542557 DHRS1Q96LJ7 313 aa6.23□□□□□ -1.41
PTPRO-208ENST00000542557 DACH2Q96NX9 599 aa6.23□□□□□ -1.41
PTPRO-208ENST00000542557 COL21A1Q96P44 957 aa6.23□□□□□ -1.41
PTPRO-208ENST00000542557 TEX101Q9BY14 249 aa6.23□□□□□ -1.41
PTPRO-208ENST00000542557 ACSS1Q9NUB1 689 aaPredicted RBP6.23□□□□□ -1.41
PTPRO-208ENST00000542557 TAS2R7Q9NYW3 318 aa6.23□□□□□ -1.41
PTPRO-208ENST00000542557 FTSJ1Q9UET6 329 aa6.23□□□□□ -1.41
PTPRO-208ENST00000542557 OSGIN1Q9UJX0 560 aa6.23□□□□□ -1.41
PTPRO-208ENST00000542557 RAB23Q9ULC3 237 aa6.23□□□□□ -1.41
PTPRO-208ENST00000542557 ACSL5Q9ULC5 683 aa6.23□□□□□ -1.41
PTPRO-208ENST00000542557 ZBTB32Q9Y2Y4 487 aaPredicted RBP6.23□□□□□ -1.41
PTPRO-208ENST00000542557 DSPPQ9NZW4 1301 aa6.23□□□□□ -1.41
PTPRO-208ENST00000542557 ZAR1LA6NP61 321 aa6.22□□□□□ -1.41
PTPRO-208ENST00000542557 J3KTA2 159 aa6.22□□□□□ -1.41
PTPRO-208ENST00000542557 KPNA4O00629 521 aaPredicted RBP6.22□□□□□ -1.41
PTPRO-208ENST00000542557 NDUFS4O43181 175 aa6.22□□□□□ -1.41
PTPRO-208ENST00000542557 NADKO95544 446 aaPredicted RBP6.22□□□□□ -1.41
PTPRO-208ENST00000542557 PCCBP05166 539 aa6.22□□□□□ -1.41
PTPRO-208ENST00000542557 DRD3P35462 400 aa6.22□□□□□ -1.41
PTPRO-208ENST00000542557 OPRD1P41143 372 aa6.22□□□□□ -1.41
PTPRO-208ENST00000542557 EIF2DP41214 584 aaKnown RBP6.22□□□□□ -1.41
PTPRO-208ENST00000542557 SEC13P55735 322 aa6.22□□□□□ -1.41
PTPRO-208ENST00000542557 CDC42P60953 191 aa6.22□□□□□ -1.41
PTPRO-208ENST00000542557 VBP1P61758 197 aa6.22□□□□□ -1.41
PTPRO-208ENST00000542557 IRF3Q14653 427 aa6.22□□□□□ -1.41
PTPRO-208ENST00000542557 WSCD2Q2TBF2 565 aa6.22□□□□□ -1.41
PTPRO-208ENST00000542557 COLEC12Q5KU26 742 aa6.22□□□□□ -1.41
PTPRO-208ENST00000542557 AGBL4Q5VU57 503 aa6.22□□□□□ -1.41
PTPRO-208ENST00000542557 C2orf16Q68DN1 1984 aa6.22□□□□□ -1.41
PTPRO-208ENST00000542557 ZNF770Q6IQ21 691 aaPredicted RBP6.22□□□□□ -1.41
PTPRO-208ENST00000542557 NIPAL1Q6NVV3 410 aa6.22□□□□□ -1.41
PTPRO-208ENST00000542557 SPRED2Q7Z698 418 aa6.22□□□□□ -1.41
PTPRO-208ENST00000542557 ADCK1Q86TW2 530 aa6.22□□□□□ -1.41
PTPRO-208ENST00000542557 SFTPA1Q8IWL2 248 aa6.22□□□□□ -1.41
PTPRO-208ENST00000542557 HORMAD2Q8N7B1 307 aa6.22□□□□□ -1.41
PTPRO-208ENST00000542557 OR9Q2Q8NGE9 314 aa6.22□□□□□ -1.41
PTPRO-208ENST00000542557 OR52J3Q8NH60 311 aa6.22□□□□□ -1.41
PTPRO-208ENST00000542557 RASSF5Q8WWW0 418 aa6.22□□□□□ -1.41
PTPRO-208ENST00000542557 LGALS12Q96DT0 336 aa6.22□□□□□ -1.41
PTPRO-208ENST00000542557 ZBED6CLQ96FA7 236 aaPredicted RBP6.22□□□□□ -1.41
PTPRO-208ENST00000542557 ACAT2Q9BWD1 397 aa6.22□□□□□ -1.41
PTPRO-208ENST00000542557 TMEM121BQ9BXQ6 578 aaPredicted RBP6.22□□□□□ -1.41
PTPRO-208ENST00000542557 SLIRPQ9GZT3 109 aaKnown RBP6.22□□□□□ -1.41
PTPRO-208ENST00000542557 SFXN1Q9H9B4 322 aa6.22□□□□□ -1.41
PTPRO-208ENST00000542557 LHX9Q9NQ69 397 aa6.22□□□□□ -1.41
PTPRO-208ENST00000542557 SIRT3Q9NTG7 399 aaPredicted RBP6.22□□□□□ -1.41
PTPRO-208ENST00000542557 ZSCAN32Q9NX65 697 aa6.22□□□□□ -1.41
PTPRO-208ENST00000542557 GIN1Q9NXP7 522 aa6.22□□□□□ -1.41
PTPRO-208ENST00000542557 GDE1Q9NZC3 331 aa6.22□□□□□ -1.41
PTPRO-208ENST00000542557 CNOT2Q9NZN8 540 aaKnown RBP6.22□□□□□ -1.41
PTPRO-208ENST00000542557 A3GALT2U3KPV4 340 aa6.22□□□□□ -1.41
PTPRO-208ENST00000542557 PMF1-BGLAPU3KQ54 211 aa6.22□□□□□ -1.41
PTPRO-208ENST00000542557 TBC1D3BA6NDS4 549 aa6.22□□□□□ -1.41
PTPRO-208ENST00000542557 EFCAB9A8MZ26 197 aa6.22□□□□□ -1.41
PTPRO-208ENST00000542557 C5orf58C9J3I9 102 aa6.22□□□□□ -1.41
PTPRO-208ENST00000542557 M0R082 166 aa6.22□□□□□ -1.41
PTPRO-208ENST00000542557 PCDH17O14917 1159 aa6.22□□□□□ -1.41
PTPRO-208ENST00000542557 CLEC3AO75596 197 aa6.22□□□□□ -1.41
PTPRO-208ENST00000542557 OXSR1O95747 527 aaPredicted RBP6.22□□□□□ -1.41
PTPRO-208ENST00000542557 EPHX1P07099 455 aa6.22□□□□□ -1.41
PTPRO-208ENST00000542557 FCARP24071 287 aa6.22□□□□□ -1.41
PTPRO-208ENST00000542557 SLC19A1P41440 591 aa6.22□□□□□ -1.41
PTPRO-208ENST00000542557 IDH2P48735 452 aaKnown RBP6.22□□□□□ -1.41
PTPRO-208ENST00000542557 MANFP55145 182 aaKnown RBP6.22□□□□□ -1.41
PTPRO-208ENST00000542557 TAS2R38P59533 333 aa6.22□□□□□ -1.41
PTPRO-208ENST00000542557 NCS1P62166 190 aa6.22□□□□□ -1.41
PTPRO-208ENST00000542557 OLR1P78380 273 aa6.22□□□□□ -1.41
PTPRO-208ENST00000542557 PUM1Q14671 1186 aaKnown RBP eCLIP6.22□□□□□ -1.41
PTPRO-208ENST00000542557 TOR1AIP1Q5JTV8 583 aa6.22□□□□□ -1.41
PTPRO-208ENST00000542557 KIAA1161Q6NSJ0 714 aa6.22□□□□□ -1.41
PTPRO-208ENST00000542557 SLC46A3Q7Z3Q1 461 aa6.22□□□□□ -1.41
PTPRO-208ENST00000542557 TTLQ8NG68 377 aa6.22□□□□□ -1.41
PTPRO-208ENST00000542557 SLC38A5Q8WUX1 472 aa6.22□□□□□ -1.41
PTPRO-208ENST00000542557 PROX1Q92786 737 aa6.22□□□□□ -1.41
PTPRO-208ENST00000542557 FGF13Q92913 245 aa6.22□□□□□ -1.41
PTPRO-208ENST00000542557 RGMAQ96B86 450 aa6.22□□□□□ -1.41
PTPRO-208ENST00000542557 CRELD1Q96HD1 420 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms