RNA–Protein interactions for RNA: ENST00000542495.5

ATPAF1-212, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-212ENST00000542495 ENDOUP21128 410 aaKnown RBP4.95□□□□□ -1.62
ATPAF1-212ENST00000542495 FUT4P22083 530 aa4.95□□□□□ -1.62
ATPAF1-212ENST00000542495 UQCRC2P22695 453 aa4.95□□□□□ -1.62
ATPAF1-212ENST00000542495 DDX6P26196 483 aaKnown RBP eCLIP4.95□□□□□ -1.62
ATPAF1-212ENST00000542495 PPM1AP35813 382 aa4.95□□□□□ -1.62
ATPAF1-212ENST00000542495 OR1E2P47887 323 aa4.95□□□□□ -1.62
ATPAF1-212ENST00000542495 IDH2P48735 452 aaKnown RBP4.95□□□□□ -1.62
ATPAF1-212ENST00000542495 ALDH9A1P49189 494 aa4.95□□□□□ -1.62
ATPAF1-212ENST00000542495 NUDT6P53370 316 aa4.95□□□□□ -1.62
ATPAF1-212ENST00000542495 CRISP3P54108 245 aa4.95□□□□□ -1.62
ATPAF1-212ENST00000542495 UGT2B15P54855 530 aa4.95□□□□□ -1.62
ATPAF1-212ENST00000542495 SNRPGP62308 76 aaKnown RBP4.95□□□□□ -1.62
ATPAF1-212ENST00000542495 DEFB103AP81534 67 aa4.95□□□□□ -1.62
ATPAF1-212ENST00000542495 MC1RQ01726 317 aa4.95□□□□□ -1.62
ATPAF1-212ENST00000542495 TAP2Q03519 686 aa4.95□□□□□ -1.62
ATPAF1-212ENST00000542495 C2orf80Q0P641 193 aa4.95□□□□□ -1.62
ATPAF1-212ENST00000542495 ST3GAL4Q11206 333 aa4.95□□□□□ -1.62
ATPAF1-212ENST00000542495 FOXC1Q12948 553 aa4.95□□□□□ -1.62
ATPAF1-212ENST00000542495 SELENBP1Q13228 472 aa4.95□□□□□ -1.62
ATPAF1-212ENST00000542495 PUM1Q14671 1186 aaKnown RBP eCLIP4.95□□□□□ -1.62
ATPAF1-212ENST00000542495 PTGES3Q15185 160 aaKnown RBP4.95□□□□□ -1.62
ATPAF1-212ENST00000542495 BCL2A1Q16548 175 aa4.95□□□□□ -1.62
ATPAF1-212ENST00000542495 ARSJQ5FYB0 599 aaPredicted RBP4.95□□□□□ -1.62
ATPAF1-212ENST00000542495 ARMCX4Q5H9R4 360 aa4.95□□□□□ -1.62
ATPAF1-212ENST00000542495 COLEC12Q5KU26 742 aa4.95□□□□□ -1.62
ATPAF1-212ENST00000542495 TMEM201Q5SNT2 666 aa4.95□□□□□ -1.62
ATPAF1-212ENST00000542495 TPRG1LQ5T0D9 272 aa4.95□□□□□ -1.62
ATPAF1-212ENST00000542495 ZNF697Q5TEC3 545 aa4.95□□□□□ -1.62
ATPAF1-212ENST00000542495 RNLSQ5VYX0 342 aa4.95□□□□□ -1.62
ATPAF1-212ENST00000542495 STEAP3Q658P3 488 aa4.95□□□□□ -1.62
ATPAF1-212ENST00000542495 FRMPD2BQ6IN97 320 aa4.95□□□□□ -1.62
ATPAF1-212ENST00000542495 KLHL17Q6TDP4 642 aa4.95□□□□□ -1.62
ATPAF1-212ENST00000542495 VN1R5Q7Z5H4 357 aa4.95□□□□□ -1.62
ATPAF1-212ENST00000542495 TMCO2Q7Z6W1 182 aaPredicted RBP4.95□□□□□ -1.62
ATPAF1-212ENST00000542495 CCDC190Q86UF4 302 aa4.95□□□□□ -1.62
ATPAF1-212ENST00000542495 RNF130Q86XS8 419 aa4.95□□□□□ -1.62
ATPAF1-212ENST00000542495 STX19Q8N4C7 294 aa4.95□□□□□ -1.62
ATPAF1-212ENST00000542495 PARP16Q8N5Y8 322 aa4.95□□□□□ -1.62
ATPAF1-212ENST00000542495 B3GNT7Q8NFL0 401 aa4.95□□□□□ -1.62
ATPAF1-212ENST00000542495 OR9Q2Q8NGE9 314 aa4.95□□□□□ -1.62
ATPAF1-212ENST00000542495 OR9A1PQ8NGU1 263 aa4.95□□□□□ -1.62
ATPAF1-212ENST00000542495 SETD7Q8WTS6 366 aaKnown RBP4.95□□□□□ -1.62
ATPAF1-212ENST00000542495 SLC5A11Q8WWX8 675 aa4.95□□□□□ -1.62
ATPAF1-212ENST00000542495 MYLIPQ8WY64 445 aa4.95□□□□□ -1.62
ATPAF1-212ENST00000542495 SLC35B4Q969S0 331 aa4.95□□□□□ -1.62
ATPAF1-212ENST00000542495 PMEPA1Q969W9 287 aa4.95□□□□□ -1.62
ATPAF1-212ENST00000542495 EFHD2Q96C19 240 aaPredicted RBP4.95□□□□□ -1.62
ATPAF1-212ENST00000542495 AP2M1Q96CW1 435 aa4.95□□□□□ -1.62
ATPAF1-212ENST00000542495 DTD2Q96FN9 168 aa4.95□□□□□ -1.62
ATPAF1-212ENST00000542495 PDXPQ96GD0 296 aa4.95□□□□□ -1.62
ATPAF1-212ENST00000542495 PPP1R16AQ96I34 528 aa4.95□□□□□ -1.62
ATPAF1-212ENST00000542495 LINC00615Q96LM1 132 aaPredicted RBP4.95□□□□□ -1.62
ATPAF1-212ENST00000542495 FOPNLQ96NB1 174 aa4.95□□□□□ -1.62
ATPAF1-212ENST00000542495 TOX2Q96NM4 488 aa4.95□□□□□ -1.62
ATPAF1-212ENST00000542495 GDF15Q99988 308 aa4.95□□□□□ -1.62
ATPAF1-212ENST00000542495 TCF25Q9BQ70 676 aa4.95□□□□□ -1.62
ATPAF1-212ENST00000542495 CENPOQ9BU64 300 aa4.95□□□□□ -1.62
ATPAF1-212ENST00000542495 RSPO3Q9BXY4 272 aaPredicted RBP4.95□□□□□ -1.62
ATPAF1-212ENST00000542495 OR51E2Q9H255 320 aa4.95□□□□□ -1.62
ATPAF1-212ENST00000542495 C11orf49Q9H6J7 331 aa4.95□□□□□ -1.62
ATPAF1-212ENST00000542495 AMBNQ9NP70 447 aa4.95□□□□□ -1.62
ATPAF1-212ENST00000542495 POLMQ9NP87 494 aaPredicted RBP4.95□□□□□ -1.62
ATPAF1-212ENST00000542495 A4GALTQ9NPC4 353 aa4.95□□□□□ -1.62
ATPAF1-212ENST00000542495 ITM2CQ9NQX7 267 aa4.95□□□□□ -1.62
ATPAF1-212ENST00000542495 POLE4Q9NR33 117 aa4.95□□□□□ -1.62
ATPAF1-212ENST00000542495 ASAH2Q9NR71 780 aa4.95□□□□□ -1.62
ATPAF1-212ENST00000542495 SPHK2Q9NRA0 654 aa4.95□□□□□ -1.62
ATPAF1-212ENST00000542495 MS4A12Q9NXJ0 267 aa4.95□□□□□ -1.62
ATPAF1-212ENST00000542495 IL36AQ9UHA7 158 aa4.95□□□□□ -1.62
ATPAF1-212ENST00000542495 ACSL6Q9UKU0 697 aa4.95□□□□□ -1.62
ATPAF1-212ENST00000542495 TBX21Q9UL17 535 aa4.95□□□□□ -1.62
ATPAF1-212ENST00000542495 MKLN1Q9UL63 735 aa4.95□□□□□ -1.62
ATPAF1-212ENST00000542495 OGDHLQ9ULD0 1010 aa4.95□□□□□ -1.62
ATPAF1-212ENST00000542495 SLC6A14Q9UN76 642 aa4.95□□□□□ -1.62
ATPAF1-212ENST00000542495 WBP11Q9Y2W2 641 aaKnown RBP4.95□□□□□ -1.62
ATPAF1-212ENST00000542495 FAM32AQ9Y421 112 aaKnown RBP4.95□□□□□ -1.62
ATPAF1-212ENST00000542495 KIF26AQ9ULI4 1882 aaPredicted RBP4.95□□□□□ -1.62
ATPAF1-212ENST00000542495 DOCK6Q96HP0 2047 aa4.95□□□□□ -1.62
ATPAF1-212ENST00000542495 RANBP2P49792 3224 aaKnown RBP4.95□□□□□ -1.62
ATPAF1-212ENST00000542495 MYOFQ9NZM1 2061 aa4.94□□□□□ -1.62
ATPAF1-212ENST00000542495 A0A075B6Q4 140 aa4.94□□□□□ -1.62
ATPAF1-212ENST00000542495 C17orf113A0A1B0GUU1 675 aa4.94□□□□□ -1.62
ATPAF1-212ENST00000542495 A0A1W2PRB8 838 aa4.94□□□□□ -1.62
ATPAF1-212ENST00000542495 TRBC2A0A5B9 178 aa4.94□□□□□ -1.62
ATPAF1-212ENST00000542495 TNFRSF10AO00220 468 aa4.94□□□□□ -1.62
ATPAF1-212ENST00000542495 WIPF1O43516 503 aa4.94□□□□□ -1.62
ATPAF1-212ENST00000542495 KDM1AO60341 852 aa4.94□□□□□ -1.62
ATPAF1-212ENST00000542495 KCNK2O95069 426 aa4.94□□□□□ -1.62
ATPAF1-212ENST00000542495 GADD45GO95257 159 aa4.94□□□□□ -1.62
ATPAF1-212ENST00000542495 PAPLNO95428 1278 aa4.94□□□□□ -1.62
ATPAF1-212ENST00000542495 TBX6O95947 436 aaPredicted RBP4.94□□□□□ -1.62
ATPAF1-212ENST00000542495 ADAP00813 363 aa4.94□□□□□ -1.62
ATPAF1-212ENST00000542495 TGFB1P01137 390 aa4.94□□□□□ -1.62
ATPAF1-212ENST00000542495 GASTP01350 101 aa4.94□□□□□ -1.62
ATPAF1-212ENST00000542495 LINC00271P0C7V0 271 aa4.94□□□□□ -1.62
ATPAF1-212ENST00000542495 DBTP11182 482 aaKnown RBP4.94□□□□□ -1.62
ATPAF1-212ENST00000542495 DDX5P17844 614 aaKnown RBP4.94□□□□□ -1.62
ATPAF1-212ENST00000542495 ACADLP28330 430 aa4.94□□□□□ -1.62
ATPAF1-212ENST00000542495 SERPINB1P30740 379 aa4.94□□□□□ -1.62
ATPAF1-212ENST00000542495 FRKP42685 505 aaPredicted RBP4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms