RNA–Protein interactions for RNA: ENST00000542286.5

DDX55-209, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 2,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-209ENST00000542286 LRRC74AQ0VAA2 488 aa14.08□□□□□ -0.16
DDX55-209ENST00000542286 ELAVL3Q14576 367 aaKnown RBP14.08□□□□□ -0.16
DDX55-209ENST00000542286 LEXMQ3ZCV2 418 aa14.08□□□□□ -0.16
DDX55-209ENST00000542286 SLX4IPQ5VYV7 408 aa14.08□□□□□ -0.16
DDX55-209ENST00000542286 FAM71E1Q6IPT2 247 aa14.08□□□□□ -0.16
DDX55-209ENST00000542286 ERN2Q76MJ5 926 aaKnown RBP14.08□□□□□ -0.16
DDX55-209ENST00000542286 RBM45Q8IUH3 476 aaKnown RBP14.08□□□□□ -0.16
DDX55-209ENST00000542286 EXOSC8Q96B26 276 aaKnown RBP14.08□□□□□ -0.16
DDX55-209ENST00000542286 ZNF300Q96RE9 604 aaPredicted RBP14.08□□□□□ -0.16
DDX55-209ENST00000542286 RNF167Q9H6Y7 350 aa14.08□□□□□ -0.16
DDX55-209ENST00000542286 NFKBIL1Q9UBC1 381 aaPredicted RBP14.08□□□□□ -0.16
DDX55-209ENST00000542286 FAM172BPA6NC97 362 aa14.07□□□□□ -0.16
DDX55-209ENST00000542286 RNASET2O00584 256 aaKnown RBP14.07□□□□□ -0.16
DDX55-209ENST00000542286 SLC9A3R1O14745 358 aaPredicted RBP14.07□□□□□ -0.16
DDX55-209ENST00000542286 PAK4O96013 591 aaPredicted RBP14.07□□□□□ -0.16
DDX55-209ENST00000542286 KRT8P05787 483 aa14.07□□□□□ -0.16
DDX55-209ENST00000542286 CLCNKAP51800 687 aa14.07□□□□□ -0.16
DDX55-209ENST00000542286 PPIGQ13427 754 aaKnown RBP eCLIP14.07□□□□□ -0.164e-6■□□□□ 11.2
DDX55-209ENST00000542286 VEZF1Q14119 521 aa14.07□□□□□ -0.16
DDX55-209ENST00000542286 GCNT6Q5T4J0 391 aa14.07□□□□□ -0.16
DDX55-209ENST00000542286 ANXA8L1Q5VT79 327 aa14.07□□□□□ -0.16
DDX55-209ENST00000542286 LAS2Q8IYD9 372 aa14.07□□□□□ -0.16
DDX55-209ENST00000542286 MCFD2Q8NI22 146 aa14.07□□□□□ -0.16
DDX55-209ENST00000542286 CXorf40AQ8TE69 158 aa14.07□□□□□ -0.16
DDX55-209ENST00000542286 YIPF6Q96EC8 236 aa14.07□□□□□ -0.16
DDX55-209ENST00000542286 GABARAPL1Q9H0R8 117 aa14.07□□□□□ -0.16
DDX55-209ENST00000542286 C1GALT1Q9NS00 363 aa14.07□□□□□ -0.16
DDX55-209ENST00000542286 MOSPD1Q9UJG1 213 aa14.07□□□□□ -0.16
DDX55-209ENST00000542286 CARD8Q9Y2G2 431 aa14.07□□□□□ -0.16
DDX55-209ENST00000542286 BRWD1Q9NSI6 2320 aa14.07□□□□□ -0.16
DDX55-209ENST00000542286 KIF26AQ9ULI4 1882 aaPredicted RBP14.07□□□□□ -0.16
DDX55-209ENST00000542286 CXorf51AA0A1B0GTR3 108 aa14.07□□□□□ -0.16
DDX55-209ENST00000542286 RFXAPO00287 272 aa14.07□□□□□ -0.16
DDX55-209ENST00000542286 B4GALT2O60909 372 aa14.07□□□□□ -0.16
DDX55-209ENST00000542286 HSD3B1P14060 373 aa14.07□□□□□ -0.16
DDX55-209ENST00000542286 HSD3B2P26439 372 aa14.07□□□□□ -0.16
DDX55-209ENST00000542286 PCGF2P35227 344 aa14.07□□□□□ -0.16
DDX55-209ENST00000542286 CDK6Q00534 326 aa14.07□□□□□ -0.16
DDX55-209ENST00000542286 CLCA4Q14CN2 919 aa14.07□□□□□ -0.16
DDX55-209ENST00000542286 BCL7AQ4VC05 210 aa14.07□□□□□ -0.16
DDX55-209ENST00000542286 FAHD1Q6P587 224 aa14.07□□□□□ -0.16
DDX55-209ENST00000542286 NRSN1Q8IZ57 195 aa14.07□□□□□ -0.16
DDX55-209ENST00000542286 SVOPQ8N4V2 548 aa14.07□□□□□ -0.16
DDX55-209ENST00000542286 OR10G2Q8NGC3 310 aa14.07□□□□□ -0.16
DDX55-209ENST00000542286 OR2L2Q8NH16 312 aa14.07□□□□□ -0.16
DDX55-209ENST00000542286 FBLIM1Q8WUP2 373 aa14.07□□□□□ -0.16
DDX55-209ENST00000542286 OTUB2Q96DC9 234 aa14.07□□□□□ -0.16
DDX55-209ENST00000542286 LGALS12Q96DT0 336 aa14.07□□□□□ -0.16
DDX55-209ENST00000542286 LRIG1Q96JA1 1093 aa14.07□□□□□ -0.16
DDX55-209ENST00000542286 EFCAB11Q9BUY7 163 aa14.07□□□□□ -0.16
DDX55-209ENST00000542286 FZD3Q9NPG1 666 aa14.07□□□□□ -0.16
DDX55-209ENST00000542286 PRSS16Q9NQE7 514 aa14.07□□□□□ -0.16
DDX55-209ENST00000542286 TEX10Q9NXF1 929 aaPredicted RBP14.07□□□□□ -0.16
DDX55-209ENST00000542286 ZNF282Q9UDV7 671 aaPredicted RBP14.07□□□□□ -0.16
DDX55-209ENST00000542286 KCNK6Q9Y257 313 aa14.07□□□□□ -0.16
DDX55-209ENST00000542286 C2orf16Q68DN1 1984 aa14.07□□□□□ -0.16
DDX55-209ENST00000542286 EDDM13A0A1B0GTR0 161 aa14.06□□□□□ -0.16
DDX55-209ENST00000542286 A0A1W2PS29 197 aa14.06□□□□□ -0.16
DDX55-209ENST00000542286 LCMT2O60294 686 aaKnown RBP14.06□□□□□ -0.16
DDX55-209ENST00000542286 CCDC159P0C7I6 412 aa14.06□□□□□ -0.16
DDX55-209ENST00000542286 ACP5P13686 325 aa14.06□□□□□ -0.16
DDX55-209ENST00000542286 ACVR2AP27037 513 aa14.06□□□□□ -0.16
DDX55-209ENST00000542286 POU1F1P28069 291 aa14.06□□□□□ -0.16
DDX55-209ENST00000542286 SEC13P55735 322 aa14.06□□□□□ -0.16
DDX55-209ENST00000542286 WSCD2Q2TBF2 565 aa14.06□□□□□ -0.16
DDX55-209ENST00000542286 RFX4Q33E94 735 aa14.06□□□□□ -0.16
DDX55-209ENST00000542286 ZC3H12BQ5HYM0 836 aaKnown RBP14.06□□□□□ -0.16
DDX55-209ENST00000542286 COLEC12Q5KU26 742 aa14.06□□□□□ -0.16
DDX55-209ENST00000542286 HIST2H2AA3Q6FI13 130 aa14.06□□□□□ -0.16
DDX55-209ENST00000542286 DGLUCYQ7Z3D6 616 aa14.06□□□□□ -0.16
DDX55-209ENST00000542286 AMZ2Q86W34 360 aa14.06□□□□□ -0.16
DDX55-209ENST00000542286 LGI4Q8N135 537 aa14.06□□□□□ -0.16
DDX55-209ENST00000542286 SUSD6Q92537 303 aa14.06□□□□□ -0.16
DDX55-209ENST00000542286 ASB16Q96NS5 453 aa14.06□□□□□ -0.16
DDX55-209ENST00000542286 PLA2G2FQ9BZM2 168 aa14.06□□□□□ -0.16
DDX55-209ENST00000542286 ROGDIQ9GZN7 287 aa14.06□□□□□ -0.16
DDX55-209ENST00000542286 DUSP21Q9H596 190 aa14.06□□□□□ -0.16
DDX55-209ENST00000542286 ITM2CQ9NQX7 267 aa14.06□□□□□ -0.16
DDX55-209ENST00000542286 GPR83Q9NYM4 423 aa14.06□□□□□ -0.16
DDX55-209ENST00000542286 TAS2R9Q9NYW1 312 aa14.06□□□□□ -0.16
DDX55-209ENST00000542286 ATP6V1HQ9UI12 483 aa14.06□□□□□ -0.16
DDX55-209ENST00000542286 PCDHGB1Q9Y5G3 927 aa14.06□□□□□ -0.16
DDX55-209ENST00000542286 ANKDD1BA6NHY2 528 aa14.06□□□□□ -0.16
DDX55-209ENST00000542286 OR52A4PA6NMU1 304 aa14.06□□□□□ -0.16
DDX55-209ENST00000542286 TAF4O00268 1085 aa14.06□□□□□ -0.16
DDX55-209ENST00000542286 GPR37L1O60883 481 aa14.06□□□□□ -0.16
DDX55-209ENST00000542286 RECKO95980 971 aa14.06□□□□□ -0.16
DDX55-209ENST00000542286 ADRA2AP08913 450 aa14.06□□□□□ -0.16
DDX55-209ENST00000542286 NAT1P18440 290 aa14.06□□□□□ -0.16
DDX55-209ENST00000542286 MAT2AP31153 395 aaKnown RBP14.06□□□□□ -0.16
DDX55-209ENST00000542286 FEN1P39748 380 aaKnown RBP14.06□□□□□ -0.16
DDX55-209ENST00000542286 TAS2R38P59533 333 aa14.06□□□□□ -0.16
DDX55-209ENST00000542286 ZNF750Q32MQ0 723 aa14.06□□□□□ -0.16
DDX55-209ENST00000542286 MEX3DQ86XN8 651 aaKnown RBP14.06□□□□□ -0.16
DDX55-209ENST00000542286 C7orf61Q8IZ16 206 aa14.06□□□□□ -0.16
DDX55-209ENST00000542286 METTL4Q8N3J2 472 aa14.06□□□□□ -0.16
DDX55-209ENST00000542286 HORMAD2Q8N7B1 307 aa14.06□□□□□ -0.16
DDX55-209ENST00000542286 FAM83FQ8NEG4 500 aaPredicted RBP14.06□□□□□ -0.16
DDX55-209ENST00000542286 ARPC5LQ9BPX5 153 aa14.06□□□□□ -0.16
DDX55-209ENST00000542286 BHLHE41Q9C0J9 482 aaPredicted RBP14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms