RNA–Protein interactions for RNA: ENST00000540998.5

CDC42SE1-207, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDC42SE1, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-207ENST00000540998 GPA33Q99795 319 aa9.87□□□□□ -0.83
CDC42SE1-207ENST00000540998 TSSK6Q9BXA6 273 aa9.87□□□□□ -0.83
CDC42SE1-207ENST00000540998 OR2B2Q9GZK3 357 aa9.87□□□□□ -0.83
CDC42SE1-207ENST00000540998 SLC6A16Q9GZN6 736 aa9.87□□□□□ -0.83
CDC42SE1-207ENST00000540998 RACGAP1Q9H0H5 632 aa9.87□□□□□ -0.83
CDC42SE1-207ENST00000540998 TRPV5Q9NQA5 729 aa9.87□□□□□ -0.83
CDC42SE1-207ENST00000540998 CCDC177Q9NQR7 707 aaPredicted RBP9.87□□□□□ -0.83
CDC42SE1-207ENST00000540998 COMMD3Q9UBI1 195 aa9.87□□□□□ -0.83
CDC42SE1-207ENST00000540998 BTNL2Q9UIR0 455 aa9.87□□□□□ -0.83
CDC42SE1-207ENST00000540998 LSM2Q9Y333 95 aaKnown RBP9.87□□□□□ -0.83
CDC42SE1-207ENST00000540998 IGLV3-16A0A075B6K0 115 aa9.87□□□□□ -0.83
CDC42SE1-207ENST00000540998 A0A0G2JMP0 313 aa9.87□□□□□ -0.83
CDC42SE1-207ENST00000540998 ANKDD1BA6NHY2 528 aa9.87□□□□□ -0.83
CDC42SE1-207ENST00000540998 PLK4O00444 970 aa9.87□□□□□ -0.83
CDC42SE1-207ENST00000540998 PPM1DO15297 605 aa9.87□□□□□ -0.83
CDC42SE1-207ENST00000540998 SH3BP5O60239 455 aa9.87□□□□□ -0.83
CDC42SE1-207ENST00000540998 B4GALT2O60909 372 aa9.87□□□□□ -0.83
CDC42SE1-207ENST00000540998 FKBP1BP68106 108 aa9.87□□□□□ -0.83
CDC42SE1-207ENST00000540998 CAMK2BQ13554 666 aa9.87□□□□□ -0.83
CDC42SE1-207ENST00000540998 P2RY14Q15391 338 aa9.87□□□□□ -0.83
CDC42SE1-207ENST00000540998 PYDC2Q56P42 97 aa9.87□□□□□ -0.83
CDC42SE1-207ENST00000540998 LYPLAL1Q5VWZ2 237 aa9.87□□□□□ -0.83
CDC42SE1-207ENST00000540998 LIPJQ5W064 366 aa9.87□□□□□ -0.83
CDC42SE1-207ENST00000540998 PPP2R2DQ66LE6 453 aa9.87□□□□□ -0.83
CDC42SE1-207ENST00000540998 ERAP2Q6P179 960 aa9.87□□□□□ -0.83
CDC42SE1-207ENST00000540998 SYCE2Q6PIF2 218 aa9.87□□□□□ -0.83
CDC42SE1-207ENST00000540998 GAREM2Q75VX8 874 aa9.87□□□□□ -0.83
CDC42SE1-207ENST00000540998 TMEM25Q86YD3 366 aa9.87□□□□□ -0.83
CDC42SE1-207ENST00000540998 ATP6V1C2Q8NEY4 427 aa9.87□□□□□ -0.83
CDC42SE1-207ENST00000540998 OR5D16Q8NGK9 328 aa9.87□□□□□ -0.83
CDC42SE1-207ENST00000540998 ZNF461Q8TAF7 563 aa9.87□□□□□ -0.83
CDC42SE1-207ENST00000540998 ZNF480Q8WV37 535 aa9.87□□□□□ -0.83
CDC42SE1-207ENST00000540998 GATAD2BQ8WXI9 593 aa9.87□□□□□ -0.83
CDC42SE1-207ENST00000540998 YIPF4Q9BSR8 244 aa9.87□□□□□ -0.83
CDC42SE1-207ENST00000540998 CDCA4Q9BXL8 241 aa9.87□□□□□ -0.83
CDC42SE1-207ENST00000540998 REEP4Q9H6H4 257 aa9.87□□□□□ -0.83
CDC42SE1-207ENST00000540998 MOV10Q9HCE1 1003 aaKnown RBP9.87□□□□□ -0.83
CDC42SE1-207ENST00000540998 DYRK4Q9NR20 520 aa9.87□□□□□ -0.83
CDC42SE1-207ENST00000540998 GULP1Q9UBP9 304 aa9.87□□□□□ -0.83
CDC42SE1-207ENST00000540998 IL20RAQ9UHF4 553 aa9.87□□□□□ -0.83
CDC42SE1-207ENST00000540998 A0A1W2PRU2 124 aa9.86□□□□□ -0.83
CDC42SE1-207ENST00000540998 K7ESM1 405 aa9.86□□□□□ -0.83
CDC42SE1-207ENST00000540998 NPC1O15118 1278 aa9.86□□□□□ -0.83
CDC42SE1-207ENST00000540998 MRPS14O60783 128 aaKnown RBP9.86□□□□□ -0.83
CDC42SE1-207ENST00000540998 PRKRAO75569 313 aaKnown RBP9.86□□□□□ -0.83
CDC42SE1-207ENST00000540998 FURINP09958 794 aa9.86□□□□□ -0.83
CDC42SE1-207ENST00000540998 GPC1P35052 558 aa9.86□□□□□ -0.83
CDC42SE1-207ENST00000540998 KIR2DL3P43628 341 aa9.86□□□□□ -0.83
CDC42SE1-207ENST00000540998 LIMS1P48059 325 aa9.86□□□□□ -0.83
CDC42SE1-207ENST00000540998 CSNK2BP67870 215 aa9.86□□□□□ -0.83
CDC42SE1-207ENST00000540998 TARDBPQ13148 414 aaKnown RBP eCLIP9.86□□□□□ -0.838e-6■■■□□ 18.9
CDC42SE1-207ENST00000540998 LARS2Q15031 903 aaKnown RBP9.86□□□□□ -0.83
CDC42SE1-207ENST00000540998 CCDC85BQ15834 202 aaPredicted RBP9.86□□□□□ -0.83
CDC42SE1-207ENST00000540998 FAM209AQ5JX71 171 aa9.86□□□□□ -0.83
CDC42SE1-207ENST00000540998 MLIPQ5VWP3 458 aa9.86□□□□□ -0.83
CDC42SE1-207ENST00000540998 ZNF770Q6IQ21 691 aaPredicted RBP9.86□□□□□ -0.83
CDC42SE1-207ENST00000540998 GRHL2Q6ISB3 625 aa9.86□□□□□ -0.83
CDC42SE1-207ENST00000540998 MSANTD1Q6ZTZ1 278 aa9.86□□□□□ -0.83
CDC42SE1-207ENST00000540998 FAM9CQ8IZT9 166 aa9.86□□□□□ -0.83
CDC42SE1-207ENST00000540998 CHCHD4Q8N4Q1 142 aa9.86□□□□□ -0.83
CDC42SE1-207ENST00000540998 OR52N2Q8NGI0 321 aa9.86□□□□□ -0.83
CDC42SE1-207ENST00000540998 C16orf78Q8WTQ4 265 aa9.86□□□□□ -0.83
CDC42SE1-207ENST00000540998 PIK3R3Q92569 461 aa9.86□□□□□ -0.83
CDC42SE1-207ENST00000540998 QRSL1Q9H0R6 528 aaKnown RBP9.86□□□□□ -0.83
CDC42SE1-207ENST00000540998 KCNK12Q9HB15 430 aa9.86□□□□□ -0.83
CDC42SE1-207ENST00000540998 REV1Q9UBZ9 1251 aa9.86□□□□□ -0.83
CDC42SE1-207ENST00000540998 ZNF282Q9UDV7 671 aaPredicted RBP9.86□□□□□ -0.83
CDC42SE1-207ENST00000540998 SNX7Q9UNH6 387 aa9.86□□□□□ -0.83
CDC42SE1-207ENST00000540998 SPIN1Q9Y657 262 aaPredicted RBP9.86□□□□□ -0.83
CDC42SE1-207ENST00000540998 MAU2Q9Y6X3 613 aa9.86□□□□□ -0.83
CDC42SE1-207ENST00000540998 ENPP4Q9Y6X5 453 aa9.86□□□□□ -0.83
CDC42SE1-207ENST00000540998 KNL1Q8NG31 2342 aa9.86□□□□□ -0.83
CDC42SE1-207ENST00000540998 OR6C70A6NIJ9 312 aa9.86□□□□□ -0.83
CDC42SE1-207ENST00000540998 FRS3O43559 492 aa9.86□□□□□ -0.83
CDC42SE1-207ENST00000540998 SOCS5O75159 536 aa9.86□□□□□ -0.83
CDC42SE1-207ENST00000540998 IFNW1P05000 195 aa9.86□□□□□ -0.83
CDC42SE1-207ENST00000540998 SCG5P05408 212 aa9.86□□□□□ -0.83
CDC42SE1-207ENST00000540998 URODP06132 367 aa9.86□□□□□ -0.83
CDC42SE1-207ENST00000540998 OLR1P78380 273 aa9.86□□□□□ -0.83
CDC42SE1-207ENST00000540998 ZNF763Q0D2J5 394 aa9.86□□□□□ -0.83
CDC42SE1-207ENST00000540998 TEAD4Q15561 434 aa9.86□□□□□ -0.83
CDC42SE1-207ENST00000540998 C19orf48Q6RUI8 117 aa9.86□□□□□ -0.83
CDC42SE1-207ENST00000540998 Q6ZNB5 142 aa9.86□□□□□ -0.83
CDC42SE1-207ENST00000540998 SLCO4C1Q6ZQN7 724 aa9.86□□□□□ -0.83
CDC42SE1-207ENST00000540998 USP30Q70CQ3 517 aa9.86□□□□□ -0.83
CDC42SE1-207ENST00000540998 PHC2Q8IXK0 858 aa9.86□□□□□ -0.83
CDC42SE1-207ENST00000540998 SLC38A5Q8WUX1 472 aa9.86□□□□□ -0.83
CDC42SE1-207ENST00000540998 C17orf50Q8WW18 174 aa9.86□□□□□ -0.83
CDC42SE1-207ENST00000540998 ASZ1Q8WWH4 475 aa9.86□□□□□ -0.83
CDC42SE1-207ENST00000540998 GEMIN6Q8WXD5 167 aaKnown RBP9.86□□□□□ -0.83
CDC42SE1-207ENST00000540998 TM9SF4Q92544 642 aa9.86□□□□□ -0.83
CDC42SE1-207ENST00000540998 TMEM159Q96B96 161 aa9.86□□□□□ -0.83
CDC42SE1-207ENST00000540998 RNF170Q96K19 258 aa9.86□□□□□ -0.83
CDC42SE1-207ENST00000540998 FAM83DQ9H4H8 585 aa9.86□□□□□ -0.83
CDC42SE1-207ENST00000540998 RC3H2Q9HBD1 1191 aaKnown RBP9.86□□□□□ -0.83
CDC42SE1-207ENST00000540998 NDRG2Q9UN36 371 aaKnown RBP9.86□□□□□ -0.83
CDC42SE1-207ENST00000540998 SCN2AQ99250 2005 aa9.86□□□□□ -0.83
CDC42SE1-207ENST00000540998 ZNF106Q9H2Y7 1883 aaKnown RBP9.86□□□□□ -0.83
CDC42SE1-207ENST00000540998 A0A1W2PRB8 838 aa9.85□□□□□ -0.83
CDC42SE1-207ENST00000540998 FABP12A6NFH5 140 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms