RNA–Protein interactions for RNA: ENST00000540963.1

CHFR-218, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 875 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-218ENST00000540963 TGM3Q08188 693 aa24.74■■□□□ 1.55
CHFR-218ENST00000540963 SLBPQ14493 270 aaKnown RBP eCLIP24.74■■□□□ 1.55
CHFR-218ENST00000540963 ABHD17CQ6PCB6 329 aa24.74■■□□□ 1.55
CHFR-218ENST00000540963 PAMR1Q6UXH9 720 aa24.74■■□□□ 1.55
CHFR-218ENST00000540963 BIVMQ86UB2 503 aa24.74■■□□□ 1.55
CHFR-218ENST00000540963 SLC2A12Q8TD20 617 aa24.74■■□□□ 1.55
CHFR-218ENST00000540963 CSF3RQ99062 836 aa24.74■■□□□ 1.55
CHFR-218ENST00000540963 EGFL8Q99944 293 aa24.74■■□□□ 1.55
CHFR-218ENST00000540963 CNPPD1Q9BV87 410 aa24.74■■□□□ 1.55
CHFR-218ENST00000540963 EHD1Q9H4M9 534 aa24.74■■□□□ 1.55
CHFR-218ENST00000540963 COPS7BQ9H9Q2 264 aaPredicted RBP24.74■■□□□ 1.55
CHFR-218ENST00000540963 LYRM4Q9HD34 91 aa24.74■■□□□ 1.55
CHFR-218ENST00000540963 ACKR4Q9NPB9 350 aa24.74■■□□□ 1.55
CHFR-218ENST00000540963 GPRC5BQ9NZH0 403 aa24.74■■□□□ 1.55
CHFR-218ENST00000540963 COPS7AQ9UBW8 275 aa24.74■■□□□ 1.55
CHFR-218ENST00000540963 SEC23IPQ9Y6Y8 1000 aaKnown RBP24.74■■□□□ 1.55
CHFR-218ENST00000540963 MPDZO75970 2070 aa24.73■■□□□ 1.55
CHFR-218ENST00000540963 DVL2O14641 736 aa24.73■■□□□ 1.55
CHFR-218ENST00000540963 ZNF354AO60765 605 aaPredicted RBP24.73■■□□□ 1.55
CHFR-218ENST00000540963 WDR47O94967 919 aa24.73■■□□□ 1.55
CHFR-218ENST00000540963 UQCRC1P31930 480 aa24.73■■□□□ 1.55
CHFR-218ENST00000540963 SLC6A12P48065 614 aa24.73■■□□□ 1.55
CHFR-218ENST00000540963 ASCL1P50553 236 aa24.73■■□□□ 1.55
CHFR-218ENST00000540963 PGGT1BP53609 377 aa24.73■■□□□ 1.55
CHFR-218ENST00000540963 PIGGQ5H8A4 983 aa24.73■■□□□ 1.55
CHFR-218ENST00000540963 SLC22A10Q63ZE4 541 aa24.73■■□□□ 1.55
CHFR-218ENST00000540963 DND1Q8IYX4 353 aaKnown RBP24.73■■□□□ 1.55
CHFR-218ENST00000540963 NUBPLQ8TB37 319 aa24.73■■□□□ 1.55
CHFR-218ENST00000540963 RNASE6Q93091 150 aaKnown RBP24.73■■□□□ 1.55
CHFR-218ENST00000540963 SH3GL2Q99962 352 aa24.73■■□□□ 1.55
CHFR-218ENST00000540963 ZNF703Q9H7S9 590 aaPredicted RBP24.73■■□□□ 1.55
CHFR-218ENST00000540963 SH2D2AQ9NP31 389 aa24.73■■□□□ 1.55
CHFR-218ENST00000540963 ALKBH4Q9NXW9 302 aa24.73■■□□□ 1.55
CHFR-218ENST00000540963 SPRR3Q9UBC9 169 aa24.73■■□□□ 1.55
CHFR-218ENST00000540963 BOKQ9UMX3 212 aaPredicted RBP24.73■■□□□ 1.55
CHFR-218ENST00000540963 C17orf105B2RV13 164 aa24.72■■□□□ 1.55
CHFR-218ENST00000540963 CDC7O00311 574 aa24.72■■□□□ 1.55
CHFR-218ENST00000540963 TBX6O95947 436 aaPredicted RBP24.72■■□□□ 1.55
CHFR-218ENST00000540963 TNNI3P19429 210 aa24.72■■□□□ 1.55
CHFR-218ENST00000540963 ZNF791Q3KP31 576 aaPredicted RBP24.72■■□□□ 1.55
CHFR-218ENST00000540963 ADAMTSL2Q86TH1 951 aa24.72■■□□□ 1.55
CHFR-218ENST00000540963 ULK2Q8IYT8 1036 aa24.72■■□□□ 1.55
CHFR-218ENST00000540963 SLC15A4Q8N697 577 aa24.72■■□□□ 1.55
CHFR-218ENST00000540963 ZNF321PQ8N8H1 164 aa24.72■■□□□ 1.55
CHFR-218ENST00000540963 PAQR8Q8TEZ7 354 aa24.72■■□□□ 1.55
CHFR-218ENST00000540963 SLCO2A1Q92959 643 aa24.72■■□□□ 1.55
CHFR-218ENST00000540963 OSBPL9Q96SU4 736 aa24.72■■□□□ 1.55
CHFR-218ENST00000540963 ROGDIQ9GZN7 287 aa24.72■■□□□ 1.55
CHFR-218ENST00000540963 SEMA4BQ9NPR2 832 aaPredicted RBP24.72■■□□□ 1.55
CHFR-218ENST00000540963 PPANQ9NQ55 473 aaKnown RBP24.72■■□□□ 1.55
CHFR-218ENST00000540963 CBLCQ9ULV8 474 aa24.72■■□□□ 1.55
CHFR-218ENST00000540963 NCKAP5O14513 1909 aa24.71■■□□□ 1.55
CHFR-218ENST00000540963 GOSR1O95249 250 aa24.71■■□□□ 1.55
CHFR-218ENST00000540963 RAF1P04049 648 aa24.71■■□□□ 1.55
CHFR-218ENST00000540963 CERS1P27544 350 aa24.71■■□□□ 1.55
CHFR-218ENST00000540963 FNTAP49354 379 aa24.71■■□□□ 1.55
CHFR-218ENST00000540963 LRRC25Q8N386 305 aaPredicted RBP24.71■■□□□ 1.55
CHFR-218ENST00000540963 RELL2Q8NC24 303 aaPredicted RBP24.71■■□□□ 1.55
CHFR-218ENST00000540963 SLC22A8Q8TCC7 542 aa24.71■■□□□ 1.55
CHFR-218ENST00000540963 ACTRT1Q8TDG2 376 aa24.71■■□□□ 1.55
CHFR-218ENST00000540963 ZNF721Q8TF20 911 aa24.71■■□□□ 1.55
CHFR-218ENST00000540963 RHBDF1Q96CC6 855 aa24.71■■□□□ 1.55
CHFR-218ENST00000540963 PWWP2AQ96N64 755 aa24.71■■□□□ 1.55
CHFR-218ENST00000540963 ZFP64Q9NPA5 681 aa24.71■■□□□ 1.55
CHFR-218ENST00000540963 DMRT3Q9NQL9 472 aa24.71■■□□□ 1.55
CHFR-218ENST00000540963 PRDM7Q9NQW5 492 aa24.71■■□□□ 1.55
CHFR-218ENST00000540963 SLC17A6Q9P2U8 582 aa24.71■■□□□ 1.55
CHFR-218ENST00000540963 ZNF629Q9UEG4 869 aaPredicted RBP24.71■■□□□ 1.55
CHFR-218ENST00000540963 MTRF1LQ9UGC7 380 aaKnown RBP24.71■■□□□ 1.55
CHFR-218ENST00000540963 AHRRA9YTQ3 701 aa24.7■■□□□ 1.54
CHFR-218ENST00000540963 KCNC1P48547 511 aa24.7■■□□□ 1.54
CHFR-218ENST00000540963 SNTB1Q13884 538 aaKnown RBP24.7■■□□□ 1.54
CHFR-218ENST00000540963 ADGRD1Q6QNK2 874 aa24.7■■□□□ 1.54
CHFR-218ENST00000540963 SEM1Q6ZVN7 128 aa24.7■■□□□ 1.54
CHFR-218ENST00000540963 MAATS1Q7Z4T9 603 aa24.7■■□□□ 1.54
CHFR-218ENST00000540963 VN1R5Q7Z5H4 357 aa24.7■■□□□ 1.54
CHFR-218ENST00000540963 SRFBP1Q8NEF9 429 aaKnown RBP24.7■■□□□ 1.54
CHFR-218ENST00000540963 NEIL3Q8TAT5 605 aa24.7■■□□□ 1.54
CHFR-218ENST00000540963 KCNC2Q96PR1 638 aa24.7■■□□□ 1.54
CHFR-218ENST00000540963 CNIH4Q9P003 139 aa24.7■■□□□ 1.54
CHFR-218ENST00000540963 NPEPPSL1A6NEC2 478 aa24.69■■□□□ 1.54
CHFR-218ENST00000540963 PGRMC1O00264 195 aaKnown RBP24.69■■□□□ 1.54
CHFR-218ENST00000540963 FREM3P0C091 2139 aa24.69■■□□□ 1.54
CHFR-218ENST00000540963 COX7A2P14406 83 aa24.69■■□□□ 1.54
CHFR-218ENST00000540963 CEACAM8P31997 349 aaPredicted RBP24.69■■□□□ 1.54
CHFR-218ENST00000540963 TIMP3P35625 211 aa24.69■■□□□ 1.54
CHFR-218ENST00000540963 PIGAP37287 484 aa24.69■■□□□ 1.54
CHFR-218ENST00000540963 GDF5P43026 501 aa24.69■■□□□ 1.54
CHFR-218ENST00000540963 BIKQ13323 160 aa24.69■■□□□ 1.54
CHFR-218ENST00000540963 DEFB113Q30KQ7 82 aa24.69■■□□□ 1.54
CHFR-218ENST00000540963 MSS51Q4VC12 460 aa24.69■■□□□ 1.54
CHFR-218ENST00000540963 FRA10AC1Q70Z53 315 aa24.69■■□□□ 1.54
CHFR-218ENST00000540963 PLAC1Q9HBJ0 212 aa24.69■■□□□ 1.54
CHFR-218ENST00000540963 SPACA6W5XKT8 324 aa24.69■■□□□ 1.54
CHFR-218ENST00000540963 NINQ8N4C6 2090 aa24.69■■□□□ 1.54
CHFR-218ENST00000540963 DNHD1Q96M86 4753 aa24.69■■□□□ 1.54
CHFR-218ENST00000540963 EPPINO95925 133 aa24.68■■□□□ 1.54
CHFR-218ENST00000540963 KCNJ2P63252 427 aa24.68■■□□□ 1.54
CHFR-218ENST00000540963 ASPHQ12797 758 aa24.68■■□□□ 1.54
CHFR-218ENST00000540963 IGDCC3Q8IVU1 814 aa24.68■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms