RNA–Protein interactions for RNA: ENST00000540960.1

CHD4-208, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 5

Gene CHD4, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-208ENST00000540960 KLHL35Q6PF15 583 aa7.95□□□□□ -1.14
CHD4-208ENST00000540960 SCIMPQ6UWF3 145 aa7.95□□□□□ -1.14
CHD4-208ENST00000540960 LRRC74BQ6ZQY2 392 aa7.95□□□□□ -1.14
CHD4-208ENST00000540960 CHST15Q7LFX5 561 aaPredicted RBP7.95□□□□□ -1.14
CHD4-208ENST00000540960 CAMKMTQ7Z624 323 aa7.95□□□□□ -1.14
CHD4-208ENST00000540960 TMPRSS11BQ86T26 416 aa7.95□□□□□ -1.14
CHD4-208ENST00000540960 SPATA24Q86W54 205 aa7.95□□□□□ -1.14
CHD4-208ENST00000540960 PARGQ86W56 976 aa7.95□□□□□ -1.14
CHD4-208ENST00000540960 CISD2Q8N5K1 135 aaKnown RBP7.95□□□□□ -1.14
CHD4-208ENST00000540960 TRIML2Q8N7C3 387 aa7.95□□□□□ -1.14
CHD4-208ENST00000540960 ADCY4Q8NFM4 1077 aa7.95□□□□□ -1.14
CHD4-208ENST00000540960 OR8J2Q8NGG1 315 aa7.95□□□□□ -1.14
CHD4-208ENST00000540960 OR52E4Q8NGH9 312 aa7.95□□□□□ -1.14
CHD4-208ENST00000540960 FBXO27Q8NI29 283 aa7.95□□□□□ -1.14
CHD4-208ENST00000540960 CHTF18Q8WVB6 975 aa7.95□□□□□ -1.14
CHD4-208ENST00000540960 NEIL2Q969S2 332 aa7.95□□□□□ -1.14
CHD4-208ENST00000540960 PYCR2Q96C36 320 aa7.95□□□□□ -1.14
CHD4-208ENST00000540960 THAP11Q96EK4 314 aa7.95□□□□□ -1.14
CHD4-208ENST00000540960 RNF31Q96EP0 1072 aa7.95□□□□□ -1.14
CHD4-208ENST00000540960 ZNF764Q96H86 408 aaPredicted RBP7.95□□□□□ -1.14
CHD4-208ENST00000540960 C12orf66Q96MD2 445 aa7.95□□□□□ -1.14
CHD4-208ENST00000540960 CGREF1Q99674 301 aa7.95□□□□□ -1.14
CHD4-208ENST00000540960 SMR3AQ99954 134 aa7.95□□□□□ -1.14
CHD4-208ENST00000540960 ECSITQ9BQ95 431 aa7.95□□□□□ -1.14
CHD4-208ENST00000540960 C1orf50Q9BV19 199 aa7.95□□□□□ -1.14
CHD4-208ENST00000540960 LRRC61Q9BV99 259 aa7.95□□□□□ -1.14
CHD4-208ENST00000540960 ROGDIQ9GZN7 287 aa7.95□□□□□ -1.14
CHD4-208ENST00000540960 CARS2Q9HA77 564 aaKnown RBP7.95□□□□□ -1.14
CHD4-208ENST00000540960 SLAMF7Q9NQ25 335 aa7.95□□□□□ -1.14
CHD4-208ENST00000540960 MBNL1Q9NR56 388 aaKnown RBP7.95□□□□□ -1.14
CHD4-208ENST00000540960 TMEM184CQ9NVA4 438 aa7.95□□□□□ -1.14
CHD4-208ENST00000540960 NIPSNAP3AQ9UFN0 247 aaPredicted RBP7.95□□□□□ -1.14
CHD4-208ENST00000540960 CD300AQ9UGN4 299 aa7.95□□□□□ -1.14
CHD4-208ENST00000540960 MOSPD1Q9UJG1 213 aa7.95□□□□□ -1.14
CHD4-208ENST00000540960 RPH3AQ9Y2J0 694 aaPredicted RBP7.95□□□□□ -1.14
CHD4-208ENST00000540960 TDRKHQ9Y2W6 561 aaKnown RBP7.95□□□□□ -1.14
CHD4-208ENST00000540960 LRRC42Q9Y546 428 aa7.95□□□□□ -1.14
CHD4-208ENST00000540960 OR1A2Q9Y585 309 aa7.95□□□□□ -1.14
CHD4-208ENST00000540960 SNX13Q9Y5W8 968 aa7.95□□□□□ -1.14
CHD4-208ENST00000540960 DGKBQ9Y6T7 804 aa7.95□□□□□ -1.14
CHD4-208ENST00000540960 KIR2DS5A0A0G2JLQ3 304 aa7.94□□□□□ -1.14
CHD4-208ENST00000540960 A0A0G2JNG1 304 aa7.94□□□□□ -1.14
CHD4-208ENST00000540960 PRSS51A0A1B0GVH4 220 aa7.94□□□□□ -1.14
CHD4-208ENST00000540960 GNG14A0A1W2PPG7 69 aa7.94□□□□□ -1.14
CHD4-208ENST00000540960 A8MUI8 341 aa7.94□□□□□ -1.14
CHD4-208ENST00000540960 E7EQ34 232 aa7.94□□□□□ -1.14
CHD4-208ENST00000540960 KIR2DS3K7RE56 304 aa7.94□□□□□ -1.14
CHD4-208ENST00000540960 GSTA4O15217 222 aa7.94□□□□□ -1.14
CHD4-208ENST00000540960 CLEC3AO75596 197 aa7.94□□□□□ -1.14
CHD4-208ENST00000540960 KRT36O76013 467 aa7.94□□□□□ -1.14
CHD4-208ENST00000540960 SCELO95171 688 aa7.94□□□□□ -1.14
CHD4-208ENST00000540960 ANXA6P08133 673 aa7.94□□□□□ -1.14
CHD4-208ENST00000540960 ANXA4P09525 319 aaPredicted RBP7.94□□□□□ -1.14
CHD4-208ENST00000540960 COX6B1P14854 86 aa7.94□□□□□ -1.14
CHD4-208ENST00000540960 KLK2P20151 261 aa7.94□□□□□ -1.14
CHD4-208ENST00000540960 ZNF10P21506 573 aaPredicted RBP7.94□□□□□ -1.14
CHD4-208ENST00000540960 SLC6A2P23975 617 aa7.94□□□□□ -1.14
CHD4-208ENST00000540960 AHRP35869 848 aa7.94□□□□□ -1.14
CHD4-208ENST00000540960 TXNL4AP83876 142 aaKnown RBP7.94□□□□□ -1.14
CHD4-208ENST00000540960 HMGCS1Q01581 520 aa7.94□□□□□ -1.14
CHD4-208ENST00000540960 PRDX1Q06830 199 aaKnown RBP7.94□□□□□ -1.14
CHD4-208ENST00000540960 TSTA3Q13630 321 aaPredicted RBP7.94□□□□□ -1.14
CHD4-208ENST00000540960 CEACAM7Q14002 265 aa7.94□□□□□ -1.14
CHD4-208ENST00000540960 KIR2DS3Q14952 304 aa7.94□□□□□ -1.14
CHD4-208ENST00000540960 KIR2DS5Q14953 304 aa7.94□□□□□ -1.14
CHD4-208ENST00000540960 FAM174BQ3ZCQ3 159 aa7.94□□□□□ -1.14
CHD4-208ENST00000540960 CRTC2Q53ET0 693 aaPredicted RBP7.94□□□□□ -1.14
CHD4-208ENST00000540960 TCHHL1Q5QJ38 904 aaPredicted RBP7.94□□□□□ -1.14
CHD4-208ENST00000540960 C6orf10Q5SRN2 563 aa7.94□□□□□ -1.14
CHD4-208ENST00000540960 CPTPQ5TA50 214 aa7.94□□□□□ -1.14
CHD4-208ENST00000540960 LCN8Q6JVE9 175 aa7.94□□□□□ -1.14
CHD4-208ENST00000540960 ENPP7Q6UWV6 458 aa7.94□□□□□ -1.14
CHD4-208ENST00000540960 TGIF2LYQ8IUE0 185 aa7.94□□□□□ -1.14
CHD4-208ENST00000540960 SLC15A3Q8IY34 581 aa7.94□□□□□ -1.14
CHD4-208ENST00000540960 LRRC56Q8IYG6 542 aaPredicted RBP7.94□□□□□ -1.14
CHD4-208ENST00000540960 NLGN4XQ8N0W4 816 aa7.94□□□□□ -1.14
CHD4-208ENST00000540960 PQLC1Q8N2U9 271 aa7.94□□□□□ -1.14
CHD4-208ENST00000540960 TRPV3Q8NET8 790 aa7.94□□□□□ -1.14
CHD4-208ENST00000540960 BHLHE22Q8NFJ8 381 aaPredicted RBP7.94□□□□□ -1.14
CHD4-208ENST00000540960 NLGN4YQ8NFZ3 816 aaPredicted RBP7.94□□□□□ -1.14
CHD4-208ENST00000540960 OR4K1Q8NGD4 311 aa7.94□□□□□ -1.14
CHD4-208ENST00000540960 OR9I1Q8NGQ6 314 aa7.94□□□□□ -1.14
CHD4-208ENST00000540960 HUS1BQ8NHY5 278 aa7.94□□□□□ -1.14
CHD4-208ENST00000540960 DNAJC9Q8WXX5 260 aa7.94□□□□□ -1.14
CHD4-208ENST00000540960 KIAA1143Q96AT1 154 aaPredicted RBP7.94□□□□□ -1.14
CHD4-208ENST00000540960 VPS33AQ96AX1 596 aa7.94□□□□□ -1.14
CHD4-208ENST00000540960 CLPTM1LQ96KA5 538 aa7.94□□□□□ -1.14
CHD4-208ENST00000540960 CCDC115Q96NT0 180 aa7.94□□□□□ -1.14
CHD4-208ENST00000540960 LGR4Q9BXB1 951 aa7.94□□□□□ -1.14
CHD4-208ENST00000540960 UGT2B28Q9BY64 529 aa7.94□□□□□ -1.14
CHD4-208ENST00000540960 KLHL4Q9C0H6 718 aa7.94□□□□□ -1.14
CHD4-208ENST00000540960 BHLHE41Q9C0J9 482 aaPredicted RBP7.94□□□□□ -1.14
CHD4-208ENST00000540960 ALG2Q9H553 416 aa7.94□□□□□ -1.14
CHD4-208ENST00000540960 DMRT3Q9NQL9 472 aa7.94□□□□□ -1.14
CHD4-208ENST00000540960 SPASTQ9UBP0 616 aa7.94□□□□□ -1.14
CHD4-208ENST00000540960 BTNL2Q9UIR0 455 aa7.94□□□□□ -1.14
CHD4-208ENST00000540960 MCM8Q9UJA3 840 aa7.94□□□□□ -1.14
CHD4-208ENST00000540960 CNOT11Q9UKZ1 510 aaKnown RBP7.94□□□□□ -1.14
CHD4-208ENST00000540960 SUFUQ9UMX1 484 aa7.94□□□□□ -1.14
CHD4-208ENST00000540960 C15orf41Q9Y2V0 281 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms