RNA–Protein interactions for RNA: ENST00000540805.5

PROM1-220, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-220ENST00000540805 TNPO3Q9Y5L0 923 aaKnown RBP5.02□□□□□ -1.61
PROM1-220ENST00000540805 A0A075B6Q4 140 aa5.02□□□□□ -1.61
PROM1-220ENST00000540805 CLCA1A8K7I4 914 aa5.02□□□□□ -1.61
PROM1-220ENST00000540805 RHPN2P1A8MT19 583 aa5.02□□□□□ -1.61
PROM1-220ENST00000540805 SLC28A1O00337 649 aa5.02□□□□□ -1.61
PROM1-220ENST00000540805 PKMP14618 531 aaKnown RBP5.02□□□□□ -1.61
PROM1-220ENST00000540805 CD72P21854 359 aa5.02□□□□□ -1.61
PROM1-220ENST00000540805 MAPK1P28482 360 aa5.02□□□□□ -1.61
PROM1-220ENST00000540805 SSTR4P31391 388 aa5.02□□□□□ -1.61
PROM1-220ENST00000540805 FEN1P39748 380 aaKnown RBP5.02□□□□□ -1.61
PROM1-220ENST00000540805 IL12RB1P42701 662 aa5.02□□□□□ -1.61
PROM1-220ENST00000540805 RGS6P49758 472 aa5.02□□□□□ -1.61
PROM1-220ENST00000540805 GZMMP51124 257 aa5.02□□□□□ -1.61
PROM1-220ENST00000540805 NTHL1P78549 312 aa5.02□□□□□ -1.61
PROM1-220ENST00000540805 CSTF3Q12996 717 aaKnown RBP5.02□□□□□ -1.61
PROM1-220ENST00000540805 EFR3AQ14156 821 aa5.02□□□□□ -1.61
PROM1-220ENST00000540805 TEAD2Q15562 447 aa5.02□□□□□ -1.61
PROM1-220ENST00000540805 PARP15Q460N3 678 aa5.02□□□□□ -1.61
PROM1-220ENST00000540805 GPAT3Q53EU6 434 aa5.02□□□□□ -1.61
PROM1-220ENST00000540805 TYW3Q6IPR3 259 aaKnown RBP5.02□□□□□ -1.61
PROM1-220ENST00000540805 TMPRSS9Q7Z410 1059 aa5.02□□□□□ -1.61
PROM1-220ENST00000540805 TMPRSS11BQ86T26 416 aa5.02□□□□□ -1.61
PROM1-220ENST00000540805 ZSWIM9Q86XI8 627 aa5.02□□□□□ -1.61
PROM1-220ENST00000540805 FAM129CQ86XR2 697 aa5.02□□□□□ -1.61
PROM1-220ENST00000540805 CYP4Z2PQ8N1L4 340 aa5.02□□□□□ -1.61
PROM1-220ENST00000540805 STK40Q8N2I9 435 aa5.02□□□□□ -1.61
PROM1-220ENST00000540805 DNAJC22Q8N4W6 341 aa5.02□□□□□ -1.61
PROM1-220ENST00000540805 BCL7CQ8WUZ0 217 aaPredicted RBP5.02□□□□□ -1.61
PROM1-220ENST00000540805 EEF1AKMT1Q8WVE0 214 aa5.02□□□□□ -1.61
PROM1-220ENST00000540805 KAT2AQ92830 837 aa5.02□□□□□ -1.61
PROM1-220ENST00000540805 FATE1Q969F0 183 aa5.02□□□□□ -1.61
PROM1-220ENST00000540805 TADA1Q96BN2 335 aa5.02□□□□□ -1.61
PROM1-220ENST00000540805 CRELD1Q96HD1 420 aa5.02□□□□□ -1.61
PROM1-220ENST00000540805 HRASLS5Q96KN8 279 aa5.02□□□□□ -1.61
PROM1-220ENST00000540805 GDF15Q99988 308 aa5.02□□□□□ -1.61
PROM1-220ENST00000540805 AIFM2Q9BRQ8 373 aa5.02□□□□□ -1.61
PROM1-220ENST00000540805 KCNH6Q9H252 994 aa5.02□□□□□ -1.61
PROM1-220ENST00000540805 ZSCAN32Q9NX65 697 aa5.02□□□□□ -1.61
PROM1-220ENST00000540805 ENOPH1Q9UHY7 261 aa5.02□□□□□ -1.61
PROM1-220ENST00000540805 KLK4Q9Y5K2 254 aa5.02□□□□□ -1.61
PROM1-220ENST00000540805 ANAPC1Q9H1A4 1944 aa5.01□□□□□ -1.61
PROM1-220ENST00000540805 CARNS1A5YM72 827 aa5.01□□□□□ -1.61
PROM1-220ENST00000540805 CCDC182A6NF36 153 aa5.01□□□□□ -1.61
PROM1-220ENST00000540805 EFCAB10A6NFE3 127 aa5.01□□□□□ -1.61
PROM1-220ENST00000540805 OR7A17O14581 309 aa5.01□□□□□ -1.61
PROM1-220ENST00000540805 NIPSNAP2O75323 286 aa5.01□□□□□ -1.61
PROM1-220ENST00000540805 KRT33AO76009 404 aa5.01□□□□□ -1.61
PROM1-220ENST00000540805 TSPAN12O95859 305 aa5.01□□□□□ -1.61
PROM1-220ENST00000540805 PTHP01270 115 aa5.01□□□□□ -1.61
PROM1-220ENST00000540805 HLA-DQA2P01906 255 aa5.01□□□□□ -1.61
PROM1-220ENST00000540805 C9P02748 559 aa5.01□□□□□ -1.61
PROM1-220ENST00000540805 STSP08842 583 aa5.01□□□□□ -1.61
PROM1-220ENST00000540805 HAPLN1P10915 354 aaPredicted RBP5.01□□□□□ -1.61
PROM1-220ENST00000540805 ACP5P13686 325 aa5.01□□□□□ -1.61
PROM1-220ENST00000540805 ZNF8P17098 575 aaPredicted RBP5.01□□□□□ -1.61
PROM1-220ENST00000540805 IL32P24001 234 aa5.01□□□□□ -1.61
PROM1-220ENST00000540805 TNFSF8P32971 234 aa5.01□□□□□ -1.61
PROM1-220ENST00000540805 GNPDA1P46926 289 aa5.01□□□□□ -1.61
PROM1-220ENST00000540805 RFX2P48378 723 aa5.01□□□□□ -1.61
PROM1-220ENST00000540805 NUDT6P53370 316 aa5.01□□□□□ -1.61
PROM1-220ENST00000540805 MAPK12P53778 367 aa5.01□□□□□ -1.61
PROM1-220ENST00000540805 ITGA1P56199 1179 aa5.01□□□□□ -1.61
PROM1-220ENST00000540805 VLDLRP98155 873 aa5.01□□□□□ -1.61
PROM1-220ENST00000540805 SUZ12Q15022 739 aaKnown RBP5.01□□□□□ -1.61
PROM1-220ENST00000540805 PCBP2Q15366 365 aaKnown RBP eCLIP5.01□□□□□ -1.616e-6■■■■□ 21.2
PROM1-220ENST00000540805 BTBD16Q32M84 506 aa5.01□□□□□ -1.61
PROM1-220ENST00000540805 USP39Q53GS9 565 aaKnown RBP5.01□□□□□ -1.61
PROM1-220ENST00000540805 TOR1AIP1Q5JTV8 583 aa5.01□□□□□ -1.61
PROM1-220ENST00000540805 LRIF1Q5T3J3 769 aa5.01□□□□□ -1.61
PROM1-220ENST00000540805 C10orf62Q5T681 223 aaPredicted RBP5.01□□□□□ -1.61
PROM1-220ENST00000540805 FAHD1Q6P587 224 aa5.01□□□□□ -1.61
PROM1-220ENST00000540805 FAM180AQ6UWF9 173 aa5.01□□□□□ -1.61
PROM1-220ENST00000540805 ENPP7Q6UWV6 458 aa5.01□□□□□ -1.61
PROM1-220ENST00000540805 MACC1Q6ZN28 852 aa5.01□□□□□ -1.61
PROM1-220ENST00000540805 ZNF367Q7RTV3 350 aa5.01□□□□□ -1.61
PROM1-220ENST00000540805 KRT73Q86Y46 540 aa5.01□□□□□ -1.61
PROM1-220ENST00000540805 UMODL1-AS1Q8N2C9 162 aa5.01□□□□□ -1.61
PROM1-220ENST00000540805 C10orf111Q8N326 155 aa5.01□□□□□ -1.61
PROM1-220ENST00000540805 CHCHD4Q8N4Q1 142 aa5.01□□□□□ -1.61
PROM1-220ENST00000540805 DEDD2Q8WXF8 326 aa5.01□□□□□ -1.61
PROM1-220ENST00000540805 KCNC2Q96PR1 638 aa5.01□□□□□ -1.61
PROM1-220ENST00000540805 KXD1Q9BQD3 176 aa5.01□□□□□ -1.61
PROM1-220ENST00000540805 GABARAPL3Q9BY60 117 aa5.01□□□□□ -1.61
PROM1-220ENST00000540805 SLC22A4Q9H015 551 aa5.01□□□□□ -1.61
PROM1-220ENST00000540805 IPPKQ9H8X2 491 aa5.01□□□□□ -1.61
PROM1-220ENST00000540805 C12orf10Q9HB07 376 aa5.01□□□□□ -1.61
PROM1-220ENST00000540805 SCPEP1Q9HB40 452 aa5.01□□□□□ -1.61
PROM1-220ENST00000540805 C3orf14Q9HBI5 128 aa5.01□□□□□ -1.61
PROM1-220ENST00000540805 LRTM1Q9HBL6 345 aa5.01□□□□□ -1.61
PROM1-220ENST00000540805 SLC6A13Q9NSD5 602 aa5.01□□□□□ -1.61
PROM1-220ENST00000540805 TDP1Q9NUW8 608 aa5.01□□□□□ -1.61
PROM1-220ENST00000540805 NLE1Q9NVX2 485 aaPredicted RBP5.01□□□□□ -1.61
PROM1-220ENST00000540805 SIRT5Q9NXA8 310 aa5.01□□□□□ -1.61
PROM1-220ENST00000540805 MUTYHQ9UIF7 546 aa5.01□□□□□ -1.61
PROM1-220ENST00000540805 PRUNE2Q8WUY3 3088 aa5.01□□□□□ -1.61
PROM1-220ENST00000540805 GLYATL1P3A0A0U1RQE8 302 aa5.01□□□□□ -1.61
PROM1-220ENST00000540805 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.01□□□□□ -1.61
PROM1-220ENST00000540805 GRXCR1A8MXD5 290 aa5.01□□□□□ -1.61
PROM1-220ENST00000540805 TNFRSF21O75509 655 aa5.01□□□□□ -1.61
PROM1-220ENST00000540805 PRAMEF1O95521 474 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms