RNA–Protein interactions for RNA: ENST00000540756.5

TTC3-225, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 2 BASIC

Gene TTC3, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-225ENST00000540756 CREG1O75629 220 aa23.2■■□□□ 1.3
TTC3-225ENST00000540756 ETFAP13804 333 aa23.2■■□□□ 1.3
TTC3-225ENST00000540756 PSMA4P25789 261 aaKnown RBP23.2■■□□□ 1.3
TTC3-225ENST00000540756 CRATP43155 626 aa23.2■■□□□ 1.3
TTC3-225ENST00000540756 LIM2P55344 173 aa23.2■■□□□ 1.3
TTC3-225ENST00000540756 TBCELQ5QJ74 424 aa23.2■■□□□ 1.3
TTC3-225ENST00000540756 ENPP6Q6UWR7 440 aa23.2■■□□□ 1.3
TTC3-225ENST00000540756 RNF130Q86XS8 419 aa23.2■■□□□ 1.3
TTC3-225ENST00000540756 OR5P2Q8WZ92 322 aa23.2■■□□□ 1.3
TTC3-225ENST00000540756 AHCYL2Q96HN2 611 aaKnown RBP23.2■■□□□ 1.3
TTC3-225ENST00000540756 SERINC2Q96SA4 455 aa23.2■■□□□ 1.3
TTC3-225ENST00000540756 EHD3Q9NZN3 535 aa23.2■■□□□ 1.3
TTC3-225ENST00000540756 NAALAD2Q9Y3Q0 740 aa23.2■■□□□ 1.3
TTC3-225ENST00000540756 URADA6NGE7 173 aa23.2■■□□□ 1.3
TTC3-225ENST00000540756 CHI3L1P36222 383 aaPredicted RBP23.2■■□□□ 1.3
TTC3-225ENST00000540756 FEN1P39748 380 aaKnown RBP23.2■■□□□ 1.3
TTC3-225ENST00000540756 EPHA4P54764 986 aa23.2■■□□□ 1.3
TTC3-225ENST00000540756 KCNAB1Q14722 419 aa23.2■■□□□ 1.3
TTC3-225ENST00000540756 SLC48A1Q6P1K1 146 aa23.2■■□□□ 1.3
TTC3-225ENST00000540756 ARHGEF39Q8N4T4 335 aa23.2■■□□□ 1.3
TTC3-225ENST00000540756 FBXO30Q8TB52 745 aa23.2■■□□□ 1.3
TTC3-225ENST00000540756 FAM162AQ96A26 154 aa23.2■■□□□ 1.3
TTC3-225ENST00000540756 ZNF764Q96H86 408 aaPredicted RBP23.2■■□□□ 1.3
TTC3-225ENST00000540756 AMDHD1Q96NU7 426 aa23.2■■□□□ 1.3
TTC3-225ENST00000540756 GAREM1Q9H706 876 aa23.2■■□□□ 1.3
TTC3-225ENST00000540756 ARMC1Q9NVT9 282 aa23.2■■□□□ 1.3
TTC3-225ENST00000540756 LYARQ9NX58 379 aaKnown RBP23.2■■□□□ 1.3
TTC3-225ENST00000540756 GMEB1Q9Y692 573 aa23.2■■□□□ 1.3
TTC3-225ENST00000540756 FAM149AA5PLN7 773 aa23.19■■□□□ 1.3
TTC3-225ENST00000540756 CSF2RBP32927 897 aa23.19■■□□□ 1.3
TTC3-225ENST00000540756 RPS26P62854 115 aaKnown RBP23.19■■□□□ 1.3
TTC3-225ENST00000540756 NKG7Q16617 165 aa23.19■■□□□ 1.3
TTC3-225ENST00000540756 VMACQ2NL98 169 aa23.19■■□□□ 1.3
TTC3-225ENST00000540756 PEAR1Q5VY43 1037 aaPredicted RBP23.19■■□□□ 1.3
TTC3-225ENST00000540756 CPZQ66K79 652 aa23.19■■□□□ 1.3
TTC3-225ENST00000540756 CCDC116Q8IYX3 515 aa23.19■■□□□ 1.3
TTC3-225ENST00000540756 TNIP2Q8NFZ5 429 aa23.19■■□□□ 1.3
TTC3-225ENST00000540756 SUN3Q8TAQ9 357 aa23.19■■□□□ 1.3
TTC3-225ENST00000540756 ZBED6CLQ96FA7 236 aaPredicted RBP23.19■■□□□ 1.3
TTC3-225ENST00000540756 TCTN2Q96GX1 697 aa23.19■■□□□ 1.3
TTC3-225ENST00000540756 PADI4Q9UM07 663 aa23.19■■□□□ 1.3
TTC3-225ENST00000540756 DAPP1Q9UN19 280 aa23.19■■□□□ 1.3
TTC3-225ENST00000540756 C15orf41Q9Y2V0 281 aa23.19■■□□□ 1.3
TTC3-225ENST00000540756 AK5Q9Y6K8 562 aa23.19■■□□□ 1.3
TTC3-225ENST00000540756 TLCD2A6NGC4 264 aa23.18■■□□□ 1.3
TTC3-225ENST00000540756 CASQ2O14958 399 aaPredicted RBP23.18■■□□□ 1.3
TTC3-225ENST00000540756 B3GALT2O43825 422 aa23.18■■□□□ 1.3
TTC3-225ENST00000540756 GUCY1B2O75343 617 aa23.18■■□□□ 1.3
TTC3-225ENST00000540756 GABRA4P48169 554 aa23.18■■□□□ 1.3
TTC3-225ENST00000540756 NCBP2P52298 156 aaKnown RBP eCLIP23.18■■□□□ 1.32e-13■□□□□ 9.2
TTC3-225ENST00000540756 SNAP47Q5SQN1 464 aa23.18■■□□□ 1.3
TTC3-225ENST00000540756 TRIML2Q8N7C3 387 aa23.18■■□□□ 1.3
TTC3-225ENST00000540756 SMOC1Q9H4F8 434 aa23.18■■□□□ 1.3
TTC3-225ENST00000540756 EPS8L2Q9H6S3 715 aa23.18■■□□□ 1.3
TTC3-225ENST00000540756 SOHLH2Q9NX45 425 aa23.18■■□□□ 1.3
TTC3-225ENST00000540756 NLGN3Q9NZ94 848 aa23.18■■□□□ 1.3
TTC3-225ENST00000540756 ANAPC2Q9UJX6 822 aa23.18■■□□□ 1.3
TTC3-225ENST00000540756 RNF103-CHMP3A0A140T963 221 aa23.18■■□□□ 1.3
TTC3-225ENST00000540756 SGK494L7N484 410 aa23.18■■□□□ 1.3
TTC3-225ENST00000540756 GMNNO75496 209 aa23.18■■□□□ 1.3
TTC3-225ENST00000540756 NR2F6P10588 404 aa23.18■■□□□ 1.3
TTC3-225ENST00000540756 CPN2P22792 545 aa23.18■■□□□ 1.3
TTC3-225ENST00000540756 SEPHS1P49903 392 aa23.18■■□□□ 1.3
TTC3-225ENST00000540756 SIM1P81133 766 aaPredicted RBP23.18■■□□□ 1.3
TTC3-225ENST00000540756 ZNF655Q8N720 491 aaPredicted RBP23.18■■□□□ 1.3
TTC3-225ENST00000540756 PPWD1Q96BP3 646 aaKnown RBP23.18■■□□□ 1.3
TTC3-225ENST00000540756 C10orf90Q96M02 699 aa23.18■■□□□ 1.3
TTC3-225ENST00000540756 LY6G6EA0A0G2JKS1 128 aa23.17■■□□□ 1.3
TTC3-225ENST00000540756 GALR3O60755 368 aaPredicted RBP23.17■■□□□ 1.3
TTC3-225ENST00000540756 SERPINA1P01009 418 aa23.17■■□□□ 1.3
TTC3-225ENST00000540756 GPIP06744 558 aa23.17■■□□□ 1.3
TTC3-225ENST00000540756 SP9P0CG40 484 aa23.17■■□□□ 1.3
TTC3-225ENST00000540756 UQCRC2P22695 453 aa23.17■■□□□ 1.3
TTC3-225ENST00000540756 CD1CP29017 333 aa23.17■■□□□ 1.3
TTC3-225ENST00000540756 ZC3H12BQ5HYM0 836 aaKnown RBP23.17■■□□□ 1.3
TTC3-225ENST00000540756 OR4N5Q8IXE1 308 aa23.17■■□□□ 1.3
TTC3-225ENST00000540756 OR52N2Q8NGI0 321 aa23.17■■□□□ 1.3
TTC3-225ENST00000540756 OR9A4Q8NGU2 314 aa23.17■■□□□ 1.3
TTC3-225ENST00000540756 CCDC74AQ96AQ1 378 aa23.17■■□□□ 1.3
TTC3-225ENST00000540756 ZDHHC12Q96GR4 267 aa23.17■■□□□ 1.3
TTC3-225ENST00000540756 RNF145Q96MT1 663 aa23.17■■□□□ 1.3
TTC3-225ENST00000540756 BBS4Q96RK4 519 aa23.17■■□□□ 1.3
TTC3-225ENST00000540756 CAPN10Q9HC96 672 aa23.17■■□□□ 1.3
TTC3-225ENST00000540756 ACSS1Q9NUB1 689 aaPredicted RBP23.17■■□□□ 1.3
TTC3-225ENST00000540756 EPHA6Q9UF33 1036 aa23.17■■□□□ 1.3
TTC3-225ENST00000540756 U3KQA8 63 aa23.17■■□□□ 1.3
TTC3-225ENST00000540756 SIGLEC6O43699 453 aa23.16■■□□□ 1.3
TTC3-225ENST00000540756 PPIBP23284 216 aaKnown RBP23.16■■□□□ 1.3
TTC3-225ENST00000540756 MLLT3P42568 568 aaPredicted RBP23.16■■□□□ 1.3
TTC3-225ENST00000540756 TNFRSF17Q02223 184 aa23.16■■□□□ 1.3
TTC3-225ENST00000540756 MTX3Q5HYI7 312 aa23.16■■□□□ 1.3
TTC3-225ENST00000540756 MANEAQ5SRI9 462 aa23.16■■□□□ 1.3
TTC3-225ENST00000540756 GOLM1Q8NBJ4 401 aa23.16■■□□□ 1.3
TTC3-225ENST00000540756 TMEM52Q8NDY8 209 aa23.16■■□□□ 1.3
TTC3-225ENST00000540756 MAGED4Q96JG8 741 aa23.16■■□□□ 1.3
TTC3-225ENST00000540756 ROGDIQ9GZN7 287 aa23.16■■□□□ 1.3
TTC3-225ENST00000540756 RAB33BQ9H082 229 aa23.16■■□□□ 1.3
TTC3-225ENST00000540756 DCAF13Q9NV06 445 aaKnown RBP23.16■■□□□ 1.3
TTC3-225ENST00000540756 MYO1GB0I1T2 1018 aa23.16■■□□□ 1.3
TTC3-225ENST00000540756 FAM227AF5H4B4 570 aa23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms