RNA–Protein interactions for RNA: ENST00000540022.5

TNFRSF1A-213, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,527 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-213ENST00000540022 PDE7AQ13946 482 aa17.83■□□□□ 0.45
TNFRSF1A-213ENST00000540022 PRSS53Q2L4Q9 553 aa17.83■□□□□ 0.45
TNFRSF1A-213ENST00000540022 ZNF385BQ569K4 471 aa17.83■□□□□ 0.45
TNFRSF1A-213ENST00000540022 TMEM164Q5U3C3 297 aa17.83■□□□□ 0.45
TNFRSF1A-213ENST00000540022 FAM91A1Q658Y4 838 aa17.83■□□□□ 0.45
TNFRSF1A-213ENST00000540022 LCN10Q6JVE6 187 aa17.83■□□□□ 0.45
TNFRSF1A-213ENST00000540022 TICAM1Q8IUC6 712 aa17.83■□□□□ 0.45
TNFRSF1A-213ENST00000540022 TESCQ96BS2 214 aa17.83■□□□□ 0.45
TNFRSF1A-213ENST00000540022 LRFN5Q96NI6 719 aa17.83■□□□□ 0.45
TNFRSF1A-213ENST00000540022 YIPF2Q9BWQ6 316 aa17.83■□□□□ 0.45
TNFRSF1A-213ENST00000540022 SPRY4Q9C004 299 aa17.83■□□□□ 0.45
TNFRSF1A-213ENST00000540022 C5AR2Q9P296 337 aa17.83■□□□□ 0.45
TNFRSF1A-213ENST00000540022 TRPC4Q9UBN4 977 aa17.83■□□□□ 0.45
TNFRSF1A-213ENST00000540022 SPACA6W5XKT8 324 aa17.83■□□□□ 0.45
TNFRSF1A-213ENST00000540022 C1orf226A1L170 272 aa17.82■□□□□ 0.44
TNFRSF1A-213ENST00000540022 FAM234BA2RU67 622 aa17.82■□□□□ 0.44
TNFRSF1A-213ENST00000540022 ONECUT2O95948 504 aa17.82■□□□□ 0.44
TNFRSF1A-213ENST00000540022 COX7A2P14406 83 aa17.82■□□□□ 0.44
TNFRSF1A-213ENST00000540022 XCR1P46094 333 aa17.82■□□□□ 0.44
TNFRSF1A-213ENST00000540022 DGKQP52824 942 aa17.82■□□□□ 0.44
TNFRSF1A-213ENST00000540022 ERV3-1Q14264 604 aa17.82■□□□□ 0.44
TNFRSF1A-213ENST00000540022 FAM174BQ3ZCQ3 159 aa17.82■□□□□ 0.44
TNFRSF1A-213ENST00000540022 SPANXN4Q5MJ08 99 aa17.82■□□□□ 0.44
TNFRSF1A-213ENST00000540022 BLOC1S3Q6QNY0 202 aa17.82■□□□□ 0.44
TNFRSF1A-213ENST00000540022 C6orf89Q6UWU4 347 aa17.82■□□□□ 0.44
TNFRSF1A-213ENST00000540022 GLB1L3Q8NCI6 653 aaPredicted RBP17.82■□□□□ 0.44
TNFRSF1A-213ENST00000540022 GALNT6Q8NCL4 622 aa17.82■□□□□ 0.44
TNFRSF1A-213ENST00000540022 MTERF3Q96E29 417 aa17.82■□□□□ 0.44
TNFRSF1A-213ENST00000540022 ZBTB18Q99592 522 aa17.82■□□□□ 0.44
TNFRSF1A-213ENST00000540022 RPF2Q9H7B2 306 aaKnown RBP17.82■□□□□ 0.44
TNFRSF1A-213ENST00000540022 MIEF1Q9NQG6 463 aa17.82■□□□□ 0.44
TNFRSF1A-213ENST00000540022 TMEM45AQ9NWC5 275 aa17.82■□□□□ 0.44
TNFRSF1A-213ENST00000540022 SH3BP4Q9P0V3 963 aa17.82■□□□□ 0.44
TNFRSF1A-213ENST00000540022 CES1P1Q9UKY3 287 aa17.82■□□□□ 0.44
TNFRSF1A-213ENST00000540022 MAPRE3Q9UPY8 281 aa17.82■□□□□ 0.44
TNFRSF1A-213ENST00000540022 LOC100653049A0A140TA62 436 aa17.82■□□□□ 0.44
TNFRSF1A-213ENST00000540022 CCT8L1PA6NM43 557 aa17.82■□□□□ 0.44
TNFRSF1A-213ENST00000540022 JRKO75564 520 aa17.82■□□□□ 0.44
TNFRSF1A-213ENST00000540022 KRT34O76011 436 aa17.82■□□□□ 0.44
TNFRSF1A-213ENST00000540022 DLGAP3O95886 979 aa17.82■□□□□ 0.44
TNFRSF1A-213ENST00000540022 LAMP1P11279 417 aa17.82■□□□□ 0.44
TNFRSF1A-213ENST00000540022 CAPN3P20807 821 aa17.82■□□□□ 0.44
TNFRSF1A-213ENST00000540022 TLX1P31314 330 aaPredicted RBP17.82■□□□□ 0.44
TNFRSF1A-213ENST00000540022 PHC1P78364 1004 aa17.82■□□□□ 0.44
TNFRSF1A-213ENST00000540022 RCAN2Q14206 197 aa17.82■□□□□ 0.44
TNFRSF1A-213ENST00000540022 SLC48A1Q6P1K1 146 aa17.82■□□□□ 0.44
TNFRSF1A-213ENST00000540022 R3HCC1LQ7Z5L2 792 aaKnown RBP17.82■□□□□ 0.44
TNFRSF1A-213ENST00000540022 CAMKMTQ7Z624 323 aa17.82■□□□□ 0.44
TNFRSF1A-213ENST00000540022 DNAJB14Q8TBM8 379 aa17.82■□□□□ 0.44
TNFRSF1A-213ENST00000540022 ADAMTS18Q8TE60 1221 aa17.82■□□□□ 0.44
TNFRSF1A-213ENST00000540022 STARD8Q92502 1023 aa17.82■□□□□ 0.44
TNFRSF1A-213ENST00000540022 TBC1D20Q96BZ9 403 aa17.82■□□□□ 0.44
TNFRSF1A-213ENST00000540022 PPCDCQ96CD2 204 aa17.82■□□□□ 0.44
TNFRSF1A-213ENST00000540022 SLC46A1Q96NT5 459 aa17.82■□□□□ 0.44
TNFRSF1A-213ENST00000540022 WDR41Q9HAD4 459 aa17.82■□□□□ 0.44
TNFRSF1A-213ENST00000540022 SLC52A3Q9NQ40 469 aa17.82■□□□□ 0.44
TNFRSF1A-213ENST00000540022 EHD3Q9NZN3 535 aa17.82■□□□□ 0.44
TNFRSF1A-213ENST00000540022 CTSFQ9UBX1 484 aa17.82■□□□□ 0.44
TNFRSF1A-213ENST00000540022 FAM208BQ5VWN6 2430 aa17.81■□□□□ 0.44
TNFRSF1A-213ENST00000540022 NR5A2O00482 541 aa17.81■□□□□ 0.44
TNFRSF1A-213ENST00000540022 NVLO15381 856 aaKnown RBP17.81■□□□□ 0.44
TNFRSF1A-213ENST00000540022 TBX19O60806 448 aa17.81■□□□□ 0.44
TNFRSF1A-213ENST00000540022 KLK3P07288 261 aaPredicted RBP17.81■□□□□ 0.44
TNFRSF1A-213ENST00000540022 RPL3P39023 403 aaKnown RBP17.81■□□□□ 0.44
TNFRSF1A-213ENST00000540022 MPEG1Q2M385 716 aa17.81■□□□□ 0.44
TNFRSF1A-213ENST00000540022 PGS1Q32NB8 556 aa17.81■□□□□ 0.44
TNFRSF1A-213ENST00000540022 VWA2Q5GFL6 755 aa17.81■□□□□ 0.44
TNFRSF1A-213ENST00000540022 CPTPQ5TA50 214 aa17.81■□□□□ 0.44
TNFRSF1A-213ENST00000540022 FAM180BQ6P0A1 224 aa17.81■□□□□ 0.44
TNFRSF1A-213ENST00000540022 FAM199XQ6PEV8 388 aaPredicted RBP17.81■□□□□ 0.44
TNFRSF1A-213ENST00000540022 TIPARPQ7Z3E1 657 aaKnown RBP17.81■□□□□ 0.44
TNFRSF1A-213ENST00000540022 SNX32Q86XE0 403 aa17.81■□□□□ 0.44
TNFRSF1A-213ENST00000540022 POU5F2Q8N7G0 328 aa17.81■□□□□ 0.44
TNFRSF1A-213ENST00000540022 VPS33AQ96AX1 596 aa17.81■□□□□ 0.44
TNFRSF1A-213ENST00000540022 EXOSC8Q96B26 276 aaKnown RBP17.81■□□□□ 0.44
TNFRSF1A-213ENST00000540022 COQ8BQ96D53 544 aa17.81■□□□□ 0.44
TNFRSF1A-213ENST00000540022 ZNF764Q96H86 408 aaPredicted RBP17.81■□□□□ 0.44
TNFRSF1A-213ENST00000540022 PRPF18Q99633 342 aaKnown RBP17.81■□□□□ 0.44
TNFRSF1A-213ENST00000540022 B3GNT4Q9C0J1 378 aa17.81■□□□□ 0.44
TNFRSF1A-213ENST00000540022 ARL8BQ9NVJ2 186 aa17.81■□□□□ 0.44
TNFRSF1A-213ENST00000540022 IGLV3-12A0A075B6K2 115 aa17.8■□□□□ 0.44
TNFRSF1A-213ENST00000540022 B4GALT2O60909 372 aa17.8■□□□□ 0.44
TNFRSF1A-213ENST00000540022 CDC123O75794 336 aaPredicted RBP17.8■□□□□ 0.44
TNFRSF1A-213ENST00000540022 BMP10O95393 424 aa17.8■□□□□ 0.44
TNFRSF1A-213ENST00000540022 PGRP06401 933 aa17.8■□□□□ 0.44
TNFRSF1A-213ENST00000540022 FHP07954 510 aa17.8■□□□□ 0.44
TNFRSF1A-213ENST00000540022 SNRPB2P08579 225 aaKnown RBP17.8■□□□□ 0.44
TNFRSF1A-213ENST00000540022 AGXTP21549 392 aa17.8■□□□□ 0.44
TNFRSF1A-213ENST00000540022 KCNK10P57789 538 aa17.8■□□□□ 0.44
TNFRSF1A-213ENST00000540022 SRSF11Q05519 484 aaKnown RBP17.8■□□□□ 0.44
TNFRSF1A-213ENST00000540022 ACTN3Q08043 901 aaPredicted RBP17.8■□□□□ 0.44
TNFRSF1A-213ENST00000540022 DPY19L1Q2PZI1 675 aa17.8■□□□□ 0.44
TNFRSF1A-213ENST00000540022 VPS26BQ4G0F5 336 aa17.8■□□□□ 0.44
TNFRSF1A-213ENST00000540022 TIGD2Q4W5G0 525 aa17.8■□□□□ 0.44
TNFRSF1A-213ENST00000540022 OR4F3Q6IEY1 312 aa17.8■□□□□ 0.44
TNFRSF1A-213ENST00000540022 OR52E8Q6IFG1 317 aa17.8■□□□□ 0.44
TNFRSF1A-213ENST00000540022 ZNF517Q6ZMY9 492 aaPredicted RBP17.8■□□□□ 0.44
TNFRSF1A-213ENST00000540022 MED25Q71SY5 747 aa17.8■□□□□ 0.44
TNFRSF1A-213ENST00000540022 OVCH1Q7RTY7 1134 aa17.8■□□□□ 0.44
TNFRSF1A-213ENST00000540022 ZC3H7AQ8IWR0 971 aaKnown RBP17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms