RNA–Protein interactions for RNA: ENST00000539737.6

USB1-203, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,212 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-203ENST00000539737 ZNF740Q8NDX6 193 aa13.95□□□□□ -0.18
USB1-203ENST00000539737 NT5CQ8TCD5 201 aa13.95□□□□□ -0.18
USB1-203ENST00000539737 SPNS1Q9H2V7 528 aa13.95□□□□□ -0.18
USB1-203ENST00000539737 GSX1Q9H4S2 264 aaPredicted RBP13.95□□□□□ -0.18
USB1-203ENST00000539737 NT5DC2Q9H857 520 aa13.95□□□□□ -0.18
USB1-203ENST00000539737 LANCL2Q9NS86 450 aa13.95□□□□□ -0.18
USB1-203ENST00000539737 NAALAD2Q9Y3Q0 740 aa13.95□□□□□ -0.18
USB1-203ENST00000539737 ABCA4P78363 2273 aa13.94□□□□□ -0.18
USB1-203ENST00000539737 HRNRQ86YZ3 2850 aaPredicted RBP13.94□□□□□ -0.18
USB1-203ENST00000539737 GOLGA8RI6L899 631 aa13.94□□□□□ -0.18
USB1-203ENST00000539737 NME2P1O60361 137 aa13.94□□□□□ -0.18
USB1-203ENST00000539737 GLRA3O75311 464 aa13.94□□□□□ -0.18
USB1-203ENST00000539737 PYGBP11216 843 aa13.94□□□□□ -0.18
USB1-203ENST00000539737 TAC1P20366 129 aa13.94□□□□□ -0.18
USB1-203ENST00000539737 NME2P22392 152 aa13.94□□□□□ -0.18
USB1-203ENST00000539737 HPDP32754 393 aaPredicted RBP13.94□□□□□ -0.18
USB1-203ENST00000539737 MEOX1P50221 254 aa13.94□□□□□ -0.18
USB1-203ENST00000539737 SLC26A5P58743 744 aa13.94□□□□□ -0.18
USB1-203ENST00000539737 BTG2P78543 158 aa13.94□□□□□ -0.18
USB1-203ENST00000539737 PCDH1Q08174 1060 aa13.94□□□□□ -0.18
USB1-203ENST00000539737 E2F2Q14209 437 aa13.94□□□□□ -0.18
USB1-203ENST00000539737 NSDHLQ15738 373 aa13.94□□□□□ -0.18
USB1-203ENST00000539737 EXT1Q16394 746 aa13.94□□□□□ -0.18
USB1-203ENST00000539737 HIST2H2ACQ16777 129 aaPredicted RBP13.94□□□□□ -0.18
USB1-203ENST00000539737 HIST2H2AA3Q6FI13 130 aa13.94□□□□□ -0.18
USB1-203ENST00000539737 C16orf47Q6ZP98 133 aaPredicted RBP13.94□□□□□ -0.18
USB1-203ENST00000539737 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.94□□□□□ -0.18
USB1-203ENST00000539737 TEX9Q8N6V9 391 aa13.94□□□□□ -0.18
USB1-203ENST00000539737 TMEM178AQ8NBL3 297 aa13.94□□□□□ -0.18
USB1-203ENST00000539737 OR2W6PQ8NHA6 318 aa13.94□□□□□ -0.18
USB1-203ENST00000539737 UBE2E3Q969T4 207 aa13.94□□□□□ -0.18
USB1-203ENST00000539737 OR1F2PQ96R84 312 aa13.94□□□□□ -0.18
USB1-203ENST00000539737 TREX2Q9BQ50 279 aaPredicted RBP13.94□□□□□ -0.18
USB1-203ENST00000539737 ROPN1BQ9BZX4 212 aaPredicted RBP13.94□□□□□ -0.18
USB1-203ENST00000539737 ROPN1Q9HAT0 212 aaPredicted RBP13.94□□□□□ -0.18
USB1-203ENST00000539737 PRM3Q9NNZ6 103 aa13.94□□□□□ -0.18
USB1-203ENST00000539737 MMP25Q9NPA2 562 aa13.94□□□□□ -0.18
USB1-203ENST00000539737 TNFRSF10DQ9UBN6 386 aa13.94□□□□□ -0.18
USB1-203ENST00000539737 DCDC2Q9UHG0 476 aa13.94□□□□□ -0.18
USB1-203ENST00000539737 RNF6Q9Y252 685 aa13.94□□□□□ -0.18
USB1-203ENST00000539737 FLNAP21333 2647 aaKnown RBP13.93□□□□□ -0.18
USB1-203ENST00000539737 PINLYPA6NC86 204 aa13.93□□□□□ -0.18
USB1-203ENST00000539737 E9PLN8 166 aa13.93□□□□□ -0.18
USB1-203ENST00000539737 PSMD12O00232 456 aaPredicted RBP13.93□□□□□ -0.18
USB1-203ENST00000539737 PRRG2O14669 202 aa13.93□□□□□ -0.18
USB1-203ENST00000539737 UGDHO60701 494 aa13.93□□□□□ -0.18
USB1-203ENST00000539737 B4GALT2O60909 372 aa13.93□□□□□ -0.18
USB1-203ENST00000539737 ERLIN1O75477 346 aa13.93□□□□□ -0.18
USB1-203ENST00000539737 IGFBP2P18065 325 aa13.93□□□□□ -0.18
USB1-203ENST00000539737 EPORP19235 508 aa13.93□□□□□ -0.18
USB1-203ENST00000539737 CAPN3P20807 821 aa13.93□□□□□ -0.18
USB1-203ENST00000539737 SERPINB1P30740 379 aa13.93□□□□□ -0.18
USB1-203ENST00000539737 CASP2P42575 452 aa13.93□□□□□ -0.18
USB1-203ENST00000539737 IST1P53990 364 aa13.93□□□□□ -0.18
USB1-203ENST00000539737 OR4D2P58180 307 aa13.93□□□□□ -0.18
USB1-203ENST00000539737 TAS2R50P59544 299 aa13.93□□□□□ -0.18
USB1-203ENST00000539737 TFF3Q07654 80 aa13.93□□□□□ -0.18
USB1-203ENST00000539737 CHIT1Q13231 466 aa13.93□□□□□ -0.18
USB1-203ENST00000539737 DOC2AQ14183 400 aa13.93□□□□□ -0.18
USB1-203ENST00000539737 RPS19BP1Q86WX3 136 aaKnown RBP13.93□□□□□ -0.18
USB1-203ENST00000539737 ANKRD53Q8N9V6 530 aa13.93□□□□□ -0.18
USB1-203ENST00000539737 M1APQ8TC57 530 aa13.93□□□□□ -0.18
USB1-203ENST00000539737 PHF21BQ96EK2 531 aa13.93□□□□□ -0.18
USB1-203ENST00000539737 VKORC1Q9BQB6 163 aa13.93□□□□□ -0.18
USB1-203ENST00000539737 LIN28AQ9H9Z2 209 aaKnown RBP13.93□□□□□ -0.18
USB1-203ENST00000539737 LGALS13Q9UHV8 139 aa13.93□□□□□ -0.18
USB1-203ENST00000539737 A0A0G2JMM0 328 aa13.92□□□□□ -0.18
USB1-203ENST00000539737 A0A1W2PPB8 328 aa13.92□□□□□ -0.18
USB1-203ENST00000539737 A0A1W2PPM1 405 aa13.92□□□□□ -0.18
USB1-203ENST00000539737 A0A1W2PRS3 328 aa13.92□□□□□ -0.18
USB1-203ENST00000539737 TLDC2A0PJX2 215 aa13.92□□□□□ -0.18
USB1-203ENST00000539737 ANKDD1BA6NHY2 528 aa13.92□□□□□ -0.18
USB1-203ENST00000539737 A8MT66 165 aa13.92□□□□□ -0.18
USB1-203ENST00000539737 KIR3DP1A8MWS1 328 aa13.92□□□□□ -0.18
USB1-203ENST00000539737 TOXO94900 526 aa13.92□□□□□ -0.18
USB1-203ENST00000539737 SIX3O95343 332 aaPredicted RBP13.92□□□□□ -0.18
USB1-203ENST00000539737 SERPINA6P08185 405 aa13.92□□□□□ -0.18
USB1-203ENST00000539737 ALOX12P18054 663 aa13.92□□□□□ -0.18
USB1-203ENST00000539737 MAOAP21397 527 aa13.92□□□□□ -0.18
USB1-203ENST00000539737 DNAJA1P31689 397 aaKnown RBP13.92□□□□□ -0.18
USB1-203ENST00000539737 PTGS2P35354 604 aa13.92□□□□□ -0.18
USB1-203ENST00000539737 HNF4AP41235 474 aa13.92□□□□□ -0.18
USB1-203ENST00000539737 CCT5P48643 541 aa13.92□□□□□ -0.18
USB1-203ENST00000539737 STXBP1P61764 594 aaKnown RBP13.92□□□□□ -0.18
USB1-203ENST00000539737 GTF2H2Q13888 395 aa13.92□□□□□ -0.18
USB1-203ENST00000539737 CMPK2Q5EBM0 449 aa13.92□□□□□ -0.18
USB1-203ENST00000539737 EMC4Q5J8M3 183 aa13.92□□□□□ -0.18
USB1-203ENST00000539737 GRHL2Q6ISB3 625 aa13.92□□□□□ -0.18
USB1-203ENST00000539737 GTF2H2CQ6P1K8 395 aa13.92□□□□□ -0.18
USB1-203ENST00000539737 GOLGA7Q7Z5G4 137 aa13.92□□□□□ -0.18
USB1-203ENST00000539737 SULF2Q8IWU5 870 aa13.92□□□□□ -0.18
USB1-203ENST00000539737 SLC5A8Q8N695 610 aa13.92□□□□□ -0.18
USB1-203ENST00000539737 ARMC2Q8NEN0 867 aa13.92□□□□□ -0.18
USB1-203ENST00000539737 OR52N2Q8NGI0 321 aa13.92□□□□□ -0.18
USB1-203ENST00000539737 FAM57AQ8TBR7 257 aa13.92□□□□□ -0.18
USB1-203ENST00000539737 PHF10Q8WUB8 498 aaKnown RBP13.92□□□□□ -0.18
USB1-203ENST00000539737 LPAR4Q99677 370 aa13.92□□□□□ -0.18
USB1-203ENST00000539737 TMEM109Q9BVC6 243 aa13.92□□□□□ -0.18
USB1-203ENST00000539737 SLC6A16Q9GZN6 736 aa13.92□□□□□ -0.18
USB1-203ENST00000539737 DEFB127Q9H1M4 99 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms