RNA–Protein interactions for RNA: ENST00000539548.6

CDH13-204, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 2,199 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-204ENST00000539548 LILRA3Q8N6C8 439 aaPredicted RBP9.22□□□□□ -0.93
CDH13-204ENST00000539548 ASCC1Q8N9N2 400 aaKnown RBP9.22□□□□□ -0.93
CDH13-204ENST00000539548 VANGL1Q8TAA9 524 aaPredicted RBP9.22□□□□□ -0.93
CDH13-204ENST00000539548 ZNF480Q8WV37 535 aa9.22□□□□□ -0.93
CDH13-204ENST00000539548 SNTG1Q9NSN8 517 aa9.22□□□□□ -0.93
CDH13-204ENST00000539548 DDX28Q9NUL7 540 aaKnown RBP9.22□□□□□ -0.93
CDH13-204ENST00000539548 ICKQ9UPZ9 632 aa9.22□□□□□ -0.93
CDH13-204ENST00000539548 CMAHPQ9Y471 501 aa9.22□□□□□ -0.93
CDH13-204ENST00000539548 COL4A6Q14031 1691 aa9.21□□□□□ -0.93
CDH13-204ENST00000539548 MEIOCA2RUB1 952 aa9.21□□□□□ -0.94
CDH13-204ENST00000539548 SEC14L5O43304 696 aa9.21□□□□□ -0.94
CDH13-204ENST00000539548 SCO2O43819 266 aa9.21□□□□□ -0.94
CDH13-204ENST00000539548 TPST2O60704 377 aa9.21□□□□□ -0.94
CDH13-204ENST00000539548 CYP7B1O75881 506 aa9.21□□□□□ -0.94
CDH13-204ENST00000539548 TGFB1P01137 390 aa9.21□□□□□ -0.94
CDH13-204ENST00000539548 ETV3P41162 512 aa9.21□□□□□ -0.94
CDH13-204ENST00000539548 PRLHRP49683 370 aa9.21□□□□□ -0.94
CDH13-204ENST00000539548 VEGFBP49765 207 aa9.21□□□□□ -0.94
CDH13-204ENST00000539548 CYP4F8P98187 520 aa9.21□□□□□ -0.94
CDH13-204ENST00000539548 ASAH1Q13510 395 aa9.21□□□□□ -0.94
CDH13-204ENST00000539548 SLBPQ14493 270 aaKnown RBP eCLIP9.21□□□□□ -0.94
CDH13-204ENST00000539548 CDK10Q15131 360 aa9.21□□□□□ -0.94
CDH13-204ENST00000539548 LEXMQ3ZCV2 418 aa9.21□□□□□ -0.94
CDH13-204ENST00000539548 IER5LQ5T953 404 aa9.21□□□□□ -0.94
CDH13-204ENST00000539548 GATAD2AQ86YP4 633 aa9.21□□□□□ -0.94
CDH13-204ENST00000539548 SIMC1Q8NDZ2 872 aa9.21□□□□□ -0.94
CDH13-204ENST00000539548 MRPS31Q92665 395 aaKnown RBP9.21□□□□□ -0.94
CDH13-204ENST00000539548 TMEM169Q96HH4 297 aa9.21□□□□□ -0.94
CDH13-204ENST00000539548 DHRS1Q96LJ7 313 aa9.21□□□□□ -0.94
CDH13-204ENST00000539548 PHOX2BQ99453 314 aa9.21□□□□□ -0.94
CDH13-204ENST00000539548 SGPP1Q9BX95 441 aa9.21□□□□□ -0.94
CDH13-204ENST00000539548 NLNQ9BYT8 704 aa9.21□□□□□ -0.94
CDH13-204ENST00000539548 OR51B5Q9H339 312 aa9.21□□□□□ -0.94
CDH13-204ENST00000539548 MARCH7Q9H992 704 aa9.21□□□□□ -0.94
CDH13-204ENST00000539548 C11orf16Q9NQ32 467 aa9.21□□□□□ -0.94
CDH13-204ENST00000539548 SSR3Q9UNL2 185 aa9.21□□□□□ -0.94
CDH13-204ENST00000539548 DYRK1BQ9Y463 629 aa9.21□□□□□ -0.94
CDH13-204ENST00000539548 SNX11Q9Y5W9 270 aa9.21□□□□□ -0.94
CDH13-204ENST00000539548 PIPSLA2A3N6 862 aa9.2□□□□□ -0.94
CDH13-204ENST00000539548 CACNB4O00305 520 aaPredicted RBP9.2□□□□□ -0.94
CDH13-204ENST00000539548 FAAHO00519 579 aa9.2□□□□□ -0.94
CDH13-204ENST00000539548 PITPNM1O00562 1244 aa9.2□□□□□ -0.94
CDH13-204ENST00000539548 C1orf105O95561 183 aa9.2□□□□□ -0.94
CDH13-204ENST00000539548 IL1AP01583 271 aa9.2□□□□□ -0.94
CDH13-204ENST00000539548 CYP17A1P05093 508 aa9.2□□□□□ -0.94
CDH13-204ENST00000539548 KLK1P06870 262 aa9.2□□□□□ -0.94
CDH13-204ENST00000539548 HBQ1P09105 142 aa9.2□□□□□ -0.94
CDH13-204ENST00000539548 CXCR2P25025 360 aa9.2□□□□□ -0.94
CDH13-204ENST00000539548 GABRR2P28476 465 aa9.2□□□□□ -0.94
CDH13-204ENST00000539548 PDHA2P29803 388 aa9.2□□□□□ -0.94
CDH13-204ENST00000539548 SOAT1P35610 550 aa9.2□□□□□ -0.94
CDH13-204ENST00000539548 WDR5P61964 334 aaKnown RBP9.2□□□□□ -0.94
CDH13-204ENST00000539548 TBPL1P62380 186 aa9.2□□□□□ -0.94
CDH13-204ENST00000539548 TMEM115Q12893 351 aaPredicted RBP9.2□□□□□ -0.94
CDH13-204ENST00000539548 SEC23BQ15437 767 aa9.2□□□□□ -0.94
CDH13-204ENST00000539548 GLYR1Q49A26 553 aaPredicted RBP9.2□□□□□ -0.94
CDH13-204ENST00000539548 ZMAT1Q5H9K5 638 aa9.2□□□□□ -0.94
CDH13-204ENST00000539548 DCST1Q5T197 706 aa9.2□□□□□ -0.94
CDH13-204ENST00000539548 MFSD4BQ5TF39 518 aa9.2□□□□□ -0.94
CDH13-204ENST00000539548 ASTLQ6HA08 431 aaPredicted RBP9.2□□□□□ -0.94
CDH13-204ENST00000539548 XKRXQ6PP77 449 aa9.2□□□□□ -0.94
CDH13-204ENST00000539548 CASP12Q6UXS9 341 aa9.2□□□□□ -0.94
CDH13-204ENST00000539548 Q6ZVU0 165 aa9.2□□□□□ -0.94
CDH13-204ENST00000539548 IKBIPQ70UQ0 350 aa9.2□□□□□ -0.94
CDH13-204ENST00000539548 GAREM2Q75VX8 874 aa9.2□□□□□ -0.94
CDH13-204ENST00000539548 LAX1Q8IWV1 398 aa9.2□□□□□ -0.94
CDH13-204ENST00000539548 OR8J1Q8NGP2 316 aa9.2□□□□□ -0.94
CDH13-204ENST00000539548 OR9Q1Q8NGQ5 310 aa9.2□□□□□ -0.94
CDH13-204ENST00000539548 OR2A12Q8NGT7 310 aa9.2□□□□□ -0.94
CDH13-204ENST00000539548 GLYATL1Q969I3 302 aa9.2□□□□□ -0.94
CDH13-204ENST00000539548 SLC25A46Q96AG3 418 aa9.2□□□□□ -0.94
CDH13-204ENST00000539548 TRMT61AQ96FX7 289 aaKnown RBP9.2□□□□□ -0.94
CDH13-204ENST00000539548 MSLNLQ96KJ4 702 aa9.2□□□□□ -0.94
CDH13-204ENST00000539548 GDF15Q99988 308 aa9.2□□□□□ -0.94
CDH13-204ENST00000539548 TMEM121BQ9BXQ6 578 aaPredicted RBP9.2□□□□□ -0.94
CDH13-204ENST00000539548 POLR2J2Q9GZM3 115 aaKnown RBP9.2□□□□□ -0.94
CDH13-204ENST00000539548 MCOLN1Q9GZU1 580 aa9.2□□□□□ -0.94
CDH13-204ENST00000539548 SLC22A4Q9H015 551 aa9.2□□□□□ -0.94
CDH13-204ENST00000539548 A4GALTQ9NPC4 353 aa9.2□□□□□ -0.94
CDH13-204ENST00000539548 DNAJC27Q9NZQ0 273 aa9.2□□□□□ -0.94
CDH13-204ENST00000539548 SH2B3Q9UQQ2 575 aa9.2□□□□□ -0.94
CDH13-204ENST00000539548 TMEM98Q9Y2Y6 226 aa9.2□□□□□ -0.94
CDH13-204ENST00000539548 KIF26AQ9ULI4 1882 aaPredicted RBP9.2□□□□□ -0.94
CDH13-204ENST00000539548 NINQ8N4C6 2090 aa9.2□□□□□ -0.94
CDH13-204ENST00000539548 MYOFQ9NZM1 2061 aa9.2□□□□□ -0.94
CDH13-204ENST00000539548 MTCL1Q9Y4B5 1905 aaKnown RBP9.2□□□□□ -0.94
CDH13-204ENST00000539548 SCN5AQ14524 2016 aa9.2□□□□□ -0.94
CDH13-204ENST00000539548 A0A1W2PQ09 198 aa9.2□□□□□ -0.94
CDH13-204ENST00000539548 HEPACAM2A8MVW5 462 aa9.2□□□□□ -0.94
CDH13-204ENST00000539548 FAM227AF5H4B4 570 aa9.2□□□□□ -0.94
CDH13-204ENST00000539548 SAP18O00422 153 aaKnown RBP9.2□□□□□ -0.94
CDH13-204ENST00000539548 URODP06132 367 aa9.2□□□□□ -0.94
CDH13-204ENST00000539548 TIMP2P16035 220 aa9.2□□□□□ -0.94
CDH13-204ENST00000539548 DDX5P17844 614 aaKnown RBP9.2□□□□□ -0.94
CDH13-204ENST00000539548 ELAVL4P26378 380 aaKnown RBP9.2□□□□□ -0.94
CDH13-204ENST00000539548 IRS1P35568 1242 aa9.2□□□□□ -0.94
CDH13-204ENST00000539548 GSTM5P46439 218 aa9.2□□□□□ -0.94
CDH13-204ENST00000539548 DGKGP49619 791 aa9.2□□□□□ -0.94
CDH13-204ENST00000539548 XKP51811 444 aa9.2□□□□□ -0.94
CDH13-204ENST00000539548 DGKEP52429 567 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms