RNA–Protein interactions for RNA: ENST00000539197.5

CCDC7-209, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-209ENST00000539197 ELMOD1Q8N336 334 aa3.14□□□□□ -1.91
CCDC7-209ENST00000539197 LSMEM1Q8N8F7 131 aa3.14□□□□□ -1.91
CCDC7-209ENST00000539197 CCDC191Q8NCU4 936 aa3.14□□□□□ -1.91
CCDC7-209ENST00000539197 ELSPBP1Q96BH3 223 aa3.14□□□□□ -1.91
CCDC7-209ENST00000539197 TNMDQ9H2S6 317 aa3.14□□□□□ -1.91
CCDC7-209ENST00000539197 UBQLN3Q9H347 655 aa3.14□□□□□ -1.91
CCDC7-209ENST00000539197 ISG20L2Q9H9L3 353 aaKnown RBP3.14□□□□□ -1.91
CCDC7-209ENST00000539197 RNF24Q9Y225 148 aa3.14□□□□□ -1.91
CCDC7-209ENST00000539197 CCL27Q9Y4X3 112 aa3.14□□□□□ -1.91
CCDC7-209ENST00000539197 LIPGQ9Y5X9 500 aa3.14□□□□□ -1.91
CCDC7-209ENST00000539197 CFAP65Q6ZU64 1925 aaKnown RBP3.14□□□□□ -1.91
CCDC7-209ENST00000539197 OR5H15A6NDH6 313 aa3.13□□□□□ -1.91
CCDC7-209ENST00000539197 NEDD8-MDP1E9PL57 170 aa3.13□□□□□ -1.91
CCDC7-209ENST00000539197 P2RX6O15547 441 aa3.13□□□□□ -1.91
CCDC7-209ENST00000539197 TBX10O75333 385 aa3.13□□□□□ -1.91
CCDC7-209ENST00000539197 PGLSO95336 258 aa3.13□□□□□ -1.91
CCDC7-209ENST00000539197 PDGFBP01127 241 aaPredicted RBP3.13□□□□□ -1.91
CCDC7-209ENST00000539197 SPP1P10451 314 aa3.13□□□□□ -1.91
CCDC7-209ENST00000539197 MECOMQ03112 1051 aa3.13□□□□□ -1.91
CCDC7-209ENST00000539197 Q6P435 159 aa3.13□□□□□ -1.91
CCDC7-209ENST00000539197 C16orf54Q6UWD8 224 aa3.13□□□□□ -1.91
CCDC7-209ENST00000539197 ABRAXAS1Q6UWZ7 409 aa3.13□□□□□ -1.91
CCDC7-209ENST00000539197 CEND1Q8N111 149 aa3.13□□□□□ -1.91
CCDC7-209ENST00000539197 CCAR2Q8N163 923 aaKnown RBP3.13□□□□□ -1.91
CCDC7-209ENST00000539197 CCDC89Q8N998 374 aa3.13□□□□□ -1.91
CCDC7-209ENST00000539197 KIF18AQ8NI77 898 aa3.13□□□□□ -1.91
CCDC7-209ENST00000539197 ZNF671Q8TAW3 534 aa3.13□□□□□ -1.91
CCDC7-209ENST00000539197 VN1R17PQ8TDU5 208 aa3.13□□□□□ -1.91
CCDC7-209ENST00000539197 SLCO4A1Q96BD0 722 aa3.13□□□□□ -1.91
CCDC7-209ENST00000539197 FERMT1Q9BQL6 677 aa3.13□□□□□ -1.91
CCDC7-209ENST00000539197 CENPOQ9BU64 300 aa3.13□□□□□ -1.91
CCDC7-209ENST00000539197 IKZF5Q9H5V7 419 aa3.13□□□□□ -1.91
CCDC7-209ENST00000539197 NT5DC2Q9H857 520 aa3.13□□□□□ -1.91
CCDC7-209ENST00000539197 ANAPC5Q9UJX4 755 aa3.13□□□□□ -1.91
CCDC7-209ENST00000539197 ANXA2P2A6NMY6 339 aa3.12□□□□□ -1.91
CCDC7-209ENST00000539197 CCDC188H7C350 402 aa3.12□□□□□ -1.91
CCDC7-209ENST00000539197 CPN1P15169 458 aa3.12□□□□□ -1.91
CCDC7-209ENST00000539197 OVGP1Q12889 678 aa3.12□□□□□ -1.91
CCDC7-209ENST00000539197 ZNF658BQ4V348 819 aaPredicted RBP3.12□□□□□ -1.91
CCDC7-209ENST00000539197 C1orf141Q5JVX7 400 aa3.12□□□□□ -1.91
CCDC7-209ENST00000539197 SPOUT1Q5T280 376 aaKnown RBP3.12□□□□□ -1.91
CCDC7-209ENST00000539197 PLPP4Q5VZY2 271 aa3.12□□□□□ -1.91
CCDC7-209ENST00000539197 SPATA21Q7Z572 469 aa3.12□□□□□ -1.91
CCDC7-209ENST00000539197 DNAJB7Q7Z6W7 309 aaPredicted RBP3.12□□□□□ -1.91
CCDC7-209ENST00000539197 ABI3BPQ7Z7G0 1075 aa3.12□□□□□ -1.91
CCDC7-209ENST00000539197 RNF175Q8N4F7 328 aa3.12□□□□□ -1.91
CCDC7-209ENST00000539197 GPR148Q8TDV2 347 aa3.12□□□□□ -1.91
CCDC7-209ENST00000539197 AFAP1L1Q8TED9 768 aa3.12□□□□□ -1.91
CCDC7-209ENST00000539197 GANCQ8TET4 914 aa3.12□□□□□ -1.91
CCDC7-209ENST00000539197 SETD7Q8WTS6 366 aaKnown RBP3.12□□□□□ -1.91
CCDC7-209ENST00000539197 BPIFA2Q96DR5 249 aa3.12□□□□□ -1.91
CCDC7-209ENST00000539197 CDHR1Q96JP9 859 aa3.12□□□□□ -1.91
CCDC7-209ENST00000539197 RAB3IPQ96QF0 476 aaPredicted RBP3.12□□□□□ -1.91
CCDC7-209ENST00000539197 CTRCQ99895 268 aa3.12□□□□□ -1.91
CCDC7-209ENST00000539197 ANKRD2Q9GZV1 360 aa3.12□□□□□ -1.91
CCDC7-209ENST00000539197 PDRG1Q9NUG6 133 aa3.12□□□□□ -1.91
CCDC7-209ENST00000539197 C5AR2Q9P296 337 aa3.12□□□□□ -1.91
CCDC7-209ENST00000539197 CFDP1Q9UEE9 299 aaPredicted RBP3.12□□□□□ -1.91
CCDC7-209ENST00000539197 MEGF6O75095 1541 aa3.12□□□□□ -1.91
CCDC7-209ENST00000539197 IGHV3-35A0A0C4DH35 117 aa3.11□□□□□ -1.91
CCDC7-209ENST00000539197 ZNF861PO60384 105 aa3.11□□□□□ -1.91
CCDC7-209ENST00000539197 SRD5A2P31213 254 aa3.11□□□□□ -1.91
CCDC7-209ENST00000539197 RAD23AP54725 363 aa3.11□□□□□ -1.91
CCDC7-209ENST00000539197 ZNF273Q14593 569 aa3.11□□□□□ -1.91
CCDC7-209ENST00000539197 PPP1R3AQ16821 1122 aa3.11□□□□□ -1.91
CCDC7-209ENST00000539197 C6orf136Q5SQH8 315 aa3.11□□□□□ -1.91
CCDC7-209ENST00000539197 FAM46CQ5VWP2 391 aa3.11□□□□□ -1.91
CCDC7-209ENST00000539197 KLHL10Q6JEL2 608 aa3.11□□□□□ -1.91
CCDC7-209ENST00000539197 RPUSD3Q6P087 351 aaKnown RBP3.11□□□□□ -1.91
CCDC7-209ENST00000539197 DZIP1Q86YF9 867 aaKnown RBP3.11□□□□□ -1.91
CCDC7-209ENST00000539197 TDHQ8IZJ6 230 aa3.11□□□□□ -1.91
CCDC7-209ENST00000539197 OR8H2Q8N162 312 aa3.11□□□□□ -1.91
CCDC7-209ENST00000539197 OR13C5Q8NGS8 318 aa3.11□□□□□ -1.91
CCDC7-209ENST00000539197 C8orf46Q8TAG6 207 aa3.11□□□□□ -1.91
CCDC7-209ENST00000539197 FAM122AQ96E09 287 aa3.11□□□□□ -1.91
CCDC7-209ENST00000539197 VSIG2Q96IQ7 327 aa3.11□□□□□ -1.91
CCDC7-209ENST00000539197 TSSK2Q96PF2 358 aa3.11□□□□□ -1.91
CCDC7-209ENST00000539197 FAM129AQ9BZQ8 928 aa3.11□□□□□ -1.91
CCDC7-209ENST00000539197 OR10A4Q9H209 315 aa3.11□□□□□ -1.91
CCDC7-209ENST00000539197 ABCC13Q9NSE7 274 aa3.11□□□□□ -1.91
CCDC7-209ENST00000539197 ZNF319Q9P2F9 582 aa3.11□□□□□ -1.91
CCDC7-209ENST00000539197 PCDHGA1Q9Y5H4 931 aa3.11□□□□□ -1.91
CCDC7-209ENST00000539197 C2orf92A0A1B0GVN3 265 aa3.1□□□□□ -1.91
CCDC7-209ENST00000539197 ARHGEF37A1IGU5 675 aa3.1□□□□□ -1.91
CCDC7-209ENST00000539197 GPAA1O43292 621 aa3.1□□□□□ -1.91
CCDC7-209ENST00000539197 PLOD3O60568 738 aa3.1□□□□□ -1.91
CCDC7-209ENST00000539197 MOCS2O96007 188 aaPredicted RBP3.1□□□□□ -1.91
CCDC7-209ENST00000539197 IGLV1-47P01700 117 aa3.1□□□□□ -1.91
CCDC7-209ENST00000539197 RPN1P04843 607 aaKnown RBP3.1□□□□□ -1.91
CCDC7-209ENST00000539197 APOA4P06727 396 aa3.1□□□□□ -1.91
CCDC7-209ENST00000539197 SP9P0CG40 484 aa3.1□□□□□ -1.91
CCDC7-209ENST00000539197 KRT3P12035 628 aa3.1□□□□□ -1.91
CCDC7-209ENST00000539197 PDGFRAP16234 1089 aa3.1□□□□□ -1.91
CCDC7-209ENST00000539197 LBPP18428 481 aa3.1□□□□□ -1.91
CCDC7-209ENST00000539197 PTAFRP25105 342 aa3.1□□□□□ -1.91
CCDC7-209ENST00000539197 TNK1Q13470 666 aa3.1□□□□□ -1.91
CCDC7-209ENST00000539197 C14orf28Q4W4Y0 310 aa3.1□□□□□ -1.91
CCDC7-209ENST00000539197 ZNF770Q6IQ21 691 aaPredicted RBP3.1□□□□□ -1.91
CCDC7-209ENST00000539197 C2orf66Q6UXQ4 117 aa3.1□□□□□ -1.91
CCDC7-209ENST00000539197 TIGD4Q8IY51 512 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms