RNA–Protein interactions for RNA: ENST00000538995.1

RTN3-209, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 814 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-209ENST00000538995 TLX1P31314 330 aaPredicted RBP10.77□□□□□ -0.69
RTN3-209ENST00000538995 BUD31P41223 144 aaPredicted RBP10.77□□□□□ -0.69
RTN3-209ENST00000538995 PLIN5Q00G26 463 aa10.77□□□□□ -0.69
RTN3-209ENST00000538995 TNFRSF17Q02223 184 aa10.77□□□□□ -0.69
RTN3-209ENST00000538995 RBPJQ06330 500 aa10.77□□□□□ -0.69
RTN3-209ENST00000538995 TRAF3Q13114 568 aa10.77□□□□□ -0.69
RTN3-209ENST00000538995 SLAMF1Q13291 335 aa10.77□□□□□ -0.69
RTN3-209ENST00000538995 ZRSR2Q15696 482 aaKnown RBP10.77□□□□□ -0.69
RTN3-209ENST00000538995 ZNF468Q5VIY5 522 aaPredicted RBP10.77□□□□□ -0.69
RTN3-209ENST00000538995 FRG2Q64ET8 278 aa10.77□□□□□ -0.69
RTN3-209ENST00000538995 MRM1Q6IN84 353 aaKnown RBP10.77□□□□□ -0.69
RTN3-209ENST00000538995 GFRALQ6UXV0 394 aa10.77□□□□□ -0.69
RTN3-209ENST00000538995 GPR180Q86V85 440 aa10.77□□□□□ -0.69
RTN3-209ENST00000538995 NUDT13Q86X67 352 aa10.77□□□□□ -0.69
RTN3-209ENST00000538995 POGLUT1Q8NBL1 392 aa10.77□□□□□ -0.69
RTN3-209ENST00000538995 OR52B6Q8NGF0 335 aa10.77□□□□□ -0.69
RTN3-209ENST00000538995 ACMSDQ8TDX5 336 aa10.77□□□□□ -0.69
RTN3-209ENST00000538995 THAP3Q8WTV1 239 aaPredicted RBP10.77□□□□□ -0.69
RTN3-209ENST00000538995 PTPMT1Q8WUK0 201 aaPredicted RBP10.77□□□□□ -0.69
RTN3-209ENST00000538995 TANKQ92844 425 aa10.77□□□□□ -0.69
RTN3-209ENST00000538995 ATP6V1E2Q96A05 226 aa10.77□□□□□ -0.69
RTN3-209ENST00000538995 FRMD6Q96NE9 622 aa10.77□□□□□ -0.69
RTN3-209ENST00000538995 FRG2BQ96QU4 278 aa10.77□□□□□ -0.69
RTN3-209ENST00000538995 SERPINI1Q99574 410 aa10.77□□□□□ -0.69
RTN3-209ENST00000538995 RHOXF2Q9BQY4 288 aa10.77□□□□□ -0.69
RTN3-209ENST00000538995 PELOQ9BRX2 385 aaKnown RBP10.77□□□□□ -0.69
RTN3-209ENST00000538995 ZNF717Q9BY31 904 aaPredicted RBP10.77□□□□□ -0.69
RTN3-209ENST00000538995 RPF2Q9H7B2 306 aaKnown RBP10.77□□□□□ -0.69
RTN3-209ENST00000538995 DDX31Q9H8H2 851 aaKnown RBP10.77□□□□□ -0.69
RTN3-209ENST00000538995 KLHL1Q9NR64 748 aa10.77□□□□□ -0.69
RTN3-209ENST00000538995 RYDENQ9NUL5 291 aaKnown RBP10.77□□□□□ -0.69
RTN3-209ENST00000538995 PSMC3IPQ9P2W1 217 aaPredicted RBP10.77□□□□□ -0.69
RTN3-209ENST00000538995 SEC14L3Q9UDX4 400 aa10.77□□□□□ -0.69
RTN3-209ENST00000538995 FBXW2Q9UKT8 454 aa10.77□□□□□ -0.69
RTN3-209ENST00000538995 KLF13Q9Y2Y9 288 aaPredicted RBP10.77□□□□□ -0.69
RTN3-209ENST00000538995 YARS2Q9Y2Z4 477 aaKnown RBP10.77□□□□□ -0.69
RTN3-209ENST00000538995 RNF11Q9Y3C5 154 aa10.77□□□□□ -0.69
RTN3-209ENST00000538995 UTP20O75691 2785 aaKnown RBP10.77□□□□□ -0.69
RTN3-209ENST00000538995 SVILO95425 2214 aa10.76□□□□□ -0.69
RTN3-209ENST00000538995 A0A0A6YYD5 115 aa10.76□□□□□ -0.69
RTN3-209ENST00000538995 IQANK1A0A1B0GTG1 560 aa10.76□□□□□ -0.69
RTN3-209ENST00000538995 A8MT66 165 aa10.76□□□□□ -0.69
RTN3-209ENST00000538995 C17orf105B2RV13 164 aa10.76□□□□□ -0.69
RTN3-209ENST00000538995 LRRTM2O43300 516 aa10.76□□□□□ -0.69
RTN3-209ENST00000538995 DYRK3O43781 588 aa10.76□□□□□ -0.69
RTN3-209ENST00000538995 FGF17O60258 216 aa10.76□□□□□ -0.69
RTN3-209ENST00000538995 LDB3O75112 727 aa10.76□□□□□ -0.69
RTN3-209ENST00000538995 SH3BGRLO75368 114 aa10.76□□□□□ -0.69
RTN3-209ENST00000538995 ITGA10O75578 1167 aa10.76□□□□□ -0.69
RTN3-209ENST00000538995 UNC5CO95185 931 aa10.76□□□□□ -0.69
RTN3-209ENST00000538995 OTCP00480 354 aa10.76□□□□□ -0.69
RTN3-209ENST00000538995 TAC1P20366 129 aa10.76□□□□□ -0.69
RTN3-209ENST00000538995 MST1P26927 711 aa10.76□□□□□ -0.69
RTN3-209ENST00000538995 BSGP35613 385 aa10.76□□□□□ -0.69
RTN3-209ENST00000538995 ARL1P40616 181 aaPredicted RBP10.76□□□□□ -0.69
RTN3-209ENST00000538995 STT3AP46977 705 aa10.76□□□□□ -0.69
RTN3-209ENST00000538995 SSR4P51571 173 aa10.76□□□□□ -0.69
RTN3-209ENST00000538995 KCNK10P57789 538 aa10.76□□□□□ -0.69
RTN3-209ENST00000538995 PMP22Q01453 160 aa10.76□□□□□ -0.69
RTN3-209ENST00000538995 IFT88Q13099 833 aa10.76□□□□□ -0.69
RTN3-209ENST00000538995 KRTCAP3Q53RY4 240 aa10.76□□□□□ -0.69
RTN3-209ENST00000538995 HSDL2Q6YN16 418 aa10.76□□□□□ -0.69
RTN3-209ENST00000538995 MAMDC2Q7Z304 686 aaPredicted RBP10.76□□□□□ -0.69
RTN3-209ENST00000538995 GALNTL5Q7Z4T8 443 aa10.76□□□□□ -0.69
RTN3-209ENST00000538995 ZNF227Q86WZ6 799 aa10.76□□□□□ -0.69
RTN3-209ENST00000538995 CYP4Z2PQ8N1L4 340 aa10.76□□□□□ -0.69
RTN3-209ENST00000538995 RNF175Q8N4F7 328 aa10.76□□□□□ -0.69
RTN3-209ENST00000538995 TMEM156Q8N614 296 aa10.76□□□□□ -0.69
RTN3-209ENST00000538995 MYRIPQ8NFW9 859 aa10.76□□□□□ -0.69
RTN3-209ENST00000538995 SLC2A12Q8TD20 617 aa10.76□□□□□ -0.69
RTN3-209ENST00000538995 ZNF483Q8TF39 744 aaPredicted RBP10.76□□□□□ -0.69
RTN3-209ENST00000538995 RELTQ969Z4 430 aa10.76□□□□□ -0.69
RTN3-209ENST00000538995 ANKRD9Q96BM1 317 aaPredicted RBP10.76□□□□□ -0.69
RTN3-209ENST00000538995 ART5Q96L15 291 aa10.76□□□□□ -0.69
RTN3-209ENST00000538995 GPR137Q96N19 417 aa10.76□□□□□ -0.69
RTN3-209ENST00000538995 SORBS1Q9BX66 1292 aaKnown RBP10.76□□□□□ -0.69
RTN3-209ENST00000538995 HES7Q9BYE0 225 aa10.76□□□□□ -0.69
RTN3-209ENST00000538995 L2HGDHQ9H9P8 463 aa10.76□□□□□ -0.69
RTN3-209ENST00000538995 PPCSQ9HAB8 311 aa10.76□□□□□ -0.69
RTN3-209ENST00000538995 ZBTB26Q9HCK0 441 aa10.76□□□□□ -0.69
RTN3-209ENST00000538995 COPS7AQ9UBW8 275 aa10.76□□□□□ -0.69
RTN3-209ENST00000538995 PROM1O43490 865 aa10.75□□□□□ -0.69
RTN3-209ENST00000538995 EEDO75530 441 aaKnown RBP10.75□□□□□ -0.69
RTN3-209ENST00000538995 ETHE1O95571 254 aa10.75□□□□□ -0.69
RTN3-209ENST00000538995 GSTA1P08263 222 aa10.75□□□□□ -0.69
RTN3-209ENST00000538995 SBK3P0C264 359 aa10.75□□□□□ -0.69
RTN3-209ENST00000538995 FAM153BP0C7A2 387 aa10.75□□□□□ -0.69
RTN3-209ENST00000538995 NR2F6P10588 404 aa10.75□□□□□ -0.69
RTN3-209ENST00000538995 ZNF24P17028 368 aa10.75□□□□□ -0.69
RTN3-209ENST00000538995 TNFRSF8P28908 595 aa10.75□□□□□ -0.69
RTN3-209ENST00000538995 HNRNPH2P55795 449 aaKnown RBP10.75□□□□□ -0.69
RTN3-209ENST00000538995 HERVK_113P63132 956 aa10.75□□□□□ -0.69
RTN3-209ENST00000538995 ALDH6A1Q02252 535 aaKnown RBP10.75□□□□□ -0.69
RTN3-209ENST00000538995 SLC29A2Q14542 456 aa10.75□□□□□ -0.69
RTN3-209ENST00000538995 MAPKAPK3Q16644 382 aa10.75□□□□□ -0.69
RTN3-209ENST00000538995 FAM153CQ494X1 144 aa10.75□□□□□ -0.69
RTN3-209ENST00000538995 TTC19Q6DKK2 380 aaPredicted RBP10.75□□□□□ -0.69
RTN3-209ENST00000538995 MTFR2Q6P444 385 aa10.75□□□□□ -0.69
RTN3-209ENST00000538995 CYP20A1Q6UW02 462 aa10.75□□□□□ -0.69
RTN3-209ENST00000538995 PAGE2Q7Z2X7 111 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms