RNA–Protein interactions for RNA: ENST00000538827.5

CD4-208, Transcript of CD4 molecule, humanhuman

TSL 1 (best)

Gene CD4, Length 985 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-208ENST00000538827 C21orf58P58505 322 aa13.36□□□□□ -0.27
CD4-208ENST00000538827 NCALDP61601 193 aa13.36□□□□□ -0.27
CD4-208ENST00000538827 ACTN3Q08043 901 aaPredicted RBP13.36□□□□□ -0.27
CD4-208ENST00000538827 NFYCQ13952 458 aa13.36□□□□□ -0.27
CD4-208ENST00000538827 FAM53BQ14153 422 aa13.36□□□□□ -0.27
CD4-208ENST00000538827 SYT16Q17RD7 645 aa13.36□□□□□ -0.27
CD4-208ENST00000538827 ISXQ2M1V0 245 aa13.36□□□□□ -0.27
CD4-208ENST00000538827 C6orf10Q5SRN2 563 aa13.36□□□□□ -0.27
CD4-208ENST00000538827 ARHGAP40Q5TG30 622 aa13.36□□□□□ -0.27
CD4-208ENST00000538827 CDCP2Q5VXM1 449 aa13.36□□□□□ -0.27
CD4-208ENST00000538827 RINLQ6ZS11 566 aa13.36□□□□□ -0.27
CD4-208ENST00000538827 SLCO6A1Q86UG4 719 aa13.36□□□□□ -0.27
CD4-208ENST00000538827 ANKRD46Q86W74 232 aa13.36□□□□□ -0.27
CD4-208ENST00000538827 KLHL29Q96CT2 875 aa13.36□□□□□ -0.27
CD4-208ENST00000538827 BBC3Q96PG8 261 aaPredicted RBP13.36□□□□□ -0.27
CD4-208ENST00000538827 CMKLR1Q99788 373 aa13.36□□□□□ -0.27
CD4-208ENST00000538827 DUSP26Q9BV47 211 aa13.36□□□□□ -0.27
CD4-208ENST00000538827 NPLQ9BXD5 320 aaPredicted RBP13.36□□□□□ -0.27
CD4-208ENST00000538827 IL1RL2Q9HB29 575 aa13.36□□□□□ -0.27
CD4-208ENST00000538827 LYRM4Q9HD34 91 aa13.36□□□□□ -0.27
CD4-208ENST00000538827 ATAD3AQ9NVI7 634 aa13.36□□□□□ -0.27
CD4-208ENST00000538827 SLC39A1Q9NY26 324 aa13.36□□□□□ -0.27
CD4-208ENST00000538827 PISDQ9UG56 409 aa13.36□□□□□ -0.27
CD4-208ENST00000538827 DAPP1Q9UN19 280 aa13.36□□□□□ -0.27
CD4-208ENST00000538827 EXO1Q9UQ84 846 aaKnown RBP13.36□□□□□ -0.27
CD4-208ENST00000538827 PCDHA9Q9Y5H5 950 aa13.36□□□□□ -0.27
CD4-208ENST00000538827 FER1L5A0AVI2 2057 aa13.35□□□□□ -0.27
CD4-208ENST00000538827 A0A1W2PP18 115 aa13.35□□□□□ -0.27
CD4-208ENST00000538827 A0A1W2PR48 441 aa13.35□□□□□ -0.27
CD4-208ENST00000538827 C1orf226A1L170 272 aa13.35□□□□□ -0.27
CD4-208ENST00000538827 DYTNA2CJ06 578 aa13.35□□□□□ -0.27
CD4-208ENST00000538827 ASPDHA6ND91 283 aa13.35□□□□□ -0.27
CD4-208ENST00000538827 B2RBV5 119 aa13.35□□□□□ -0.27
CD4-208ENST00000538827 POLR1CO15160 346 aaPredicted RBP13.35□□□□□ -0.27
CD4-208ENST00000538827 PDPK1O15530 556 aa13.35□□□□□ -0.27
CD4-208ENST00000538827 CHST10O43529 356 aa13.35□□□□□ -0.27
CD4-208ENST00000538827 HNRNPCL1O60812 293 aaKnown RBP13.35□□□□□ -0.27
CD4-208ENST00000538827 ERAL1O75616 437 aaKnown RBP13.35□□□□□ -0.27
CD4-208ENST00000538827 ATP5HO75947 161 aa13.35□□□□□ -0.27
CD4-208ENST00000538827 CPSF4O95639 269 aaKnown RBP13.35□□□□□ -0.27
CD4-208ENST00000538827 LAMP1P11279 417 aa13.35□□□□□ -0.27
CD4-208ENST00000538827 RNH1P13489 461 aaKnown RBP13.35□□□□□ -0.27
CD4-208ENST00000538827 DRD2P14416 443 aa13.35□□□□□ -0.27
CD4-208ENST00000538827 ITIH1P19827 911 aa13.35□□□□□ -0.27
CD4-208ENST00000538827 NTSP30990 170 aa13.35□□□□□ -0.27
CD4-208ENST00000538827 TLX1P31314 330 aaPredicted RBP13.35□□□□□ -0.27
CD4-208ENST00000538827 OR1D4P47884 311 aa13.35□□□□□ -0.27
CD4-208ENST00000538827 MNAT1P51948 309 aa13.35□□□□□ -0.27
CD4-208ENST00000538827 SRSF11Q05519 484 aaKnown RBP13.35□□□□□ -0.27
CD4-208ENST00000538827 ART3Q13508 389 aa13.35□□□□□ -0.27
CD4-208ENST00000538827 PDE7AQ13946 482 aa13.35□□□□□ -0.27
CD4-208ENST00000538827 MAPKAPK3Q16644 382 aa13.35□□□□□ -0.27
CD4-208ENST00000538827 YOD1Q5VVQ6 348 aaPredicted RBP13.35□□□□□ -0.27
CD4-208ENST00000538827 OR52E8Q6IFG1 317 aa13.35□□□□□ -0.27
CD4-208ENST00000538827 DHDDSQ86SQ9 333 aa13.35□□□□□ -0.27
CD4-208ENST00000538827 DSELQ8IZU8 1212 aa13.35□□□□□ -0.27
CD4-208ENST00000538827 PCYOX1LQ8NBM8 494 aa13.35□□□□□ -0.27
CD4-208ENST00000538827 PUM2Q8TB72 1066 aaKnown RBP eCLIP13.35□□□□□ -0.27
CD4-208ENST00000538827 ZDHHC19Q8WVZ1 309 aaPredicted RBP13.35□□□□□ -0.27
CD4-208ENST00000538827 UCN3Q969E3 161 aa13.35□□□□□ -0.27
CD4-208ENST00000538827 CIDECQ96AQ7 238 aaPredicted RBP13.35□□□□□ -0.27
CD4-208ENST00000538827 MTERF3Q96E29 417 aa13.35□□□□□ -0.27
CD4-208ENST00000538827 PEX11GQ96HA9 241 aa13.35□□□□□ -0.27
CD4-208ENST00000538827 RMND5AQ9H871 391 aa13.35□□□□□ -0.27
CD4-208ENST00000538827 GIMAP4Q9NUV9 329 aa13.35□□□□□ -0.27
CD4-208ENST00000538827 FAM120CQ9NX05 1096 aaKnown RBP13.35□□□□□ -0.27
CD4-208ENST00000538827 CDC14AQ9UNH5 594 aa13.35□□□□□ -0.27
CD4-208ENST00000538827 ENTPD4Q9Y227 616 aa13.35□□□□□ -0.27
CD4-208ENST00000538827 WBP11Q9Y2W2 641 aaKnown RBP13.35□□□□□ -0.27
CD4-208ENST00000538827 ACACAQ13085 2346 aa13.34□□□□□ -0.27
CD4-208ENST00000538827 GABRR3A8MPY1 467 aa13.34□□□□□ -0.27
CD4-208ENST00000538827 PROM1O43490 865 aa13.34□□□□□ -0.27
CD4-208ENST00000538827 ABCB1P08183 1280 aaPredicted RBP13.34□□□□□ -0.27
CD4-208ENST00000538827 JMJD7P0C870 316 aa13.34□□□□□ -0.27
CD4-208ENST00000538827 SOAT1P35610 550 aa13.34□□□□□ -0.27
CD4-208ENST00000538827 SLC25A3Q00325 362 aa13.34□□□□□ -0.27
CD4-208ENST00000538827 MC2RQ01718 297 aa13.34□□□□□ -0.27
CD4-208ENST00000538827 LACTB2Q53H82 288 aaPredicted RBP13.34□□□□□ -0.27
CD4-208ENST00000538827 C3orf38Q5JPI3 329 aa13.34□□□□□ -0.27
CD4-208ENST00000538827 PAGE3Q5JUK9 113 aa13.34□□□□□ -0.27
CD4-208ENST00000538827 PWWP2BQ6NUJ5 590 aa13.34□□□□□ -0.27
CD4-208ENST00000538827 FAM180BQ6P0A1 224 aa13.34□□□□□ -0.27
CD4-208ENST00000538827 RAB11FIP2Q7L804 512 aa13.34□□□□□ -0.27
CD4-208ENST00000538827 CAMKMTQ7Z624 323 aa13.34□□□□□ -0.27
CD4-208ENST00000538827 RETREG3Q86VR2 466 aa13.34□□□□□ -0.27
CD4-208ENST00000538827 CLECL1Q8IZS7 167 aa13.34□□□□□ -0.27
CD4-208ENST00000538827 BMPERQ8N8U9 685 aa13.34□□□□□ -0.27
CD4-208ENST00000538827 FBXO27Q8NI29 283 aa13.34□□□□□ -0.27
CD4-208ENST00000538827 ADAMTS18Q8TE60 1221 aa13.34□□□□□ -0.27
CD4-208ENST00000538827 TSPEARQ8WU66 669 aa13.34□□□□□ -0.27
CD4-208ENST00000538827 MVB12AQ96EY5 273 aa13.34□□□□□ -0.27
CD4-208ENST00000538827 LIN37Q96GY3 246 aaPredicted RBP13.34□□□□□ -0.27
CD4-208ENST00000538827 ITCHQ96J02 903 aa13.34□□□□□ -0.27
CD4-208ENST00000538827 BHLHE41Q9C0J9 482 aaPredicted RBP13.34□□□□□ -0.27
CD4-208ENST00000538827 EFCAB1Q9HAE3 211 aa13.34□□□□□ -0.27
CD4-208ENST00000538827 MS4A12Q9NXJ0 267 aa13.34□□□□□ -0.27
CD4-208ENST00000538827 UTS2RQ9UKP6 389 aa13.34□□□□□ -0.27
CD4-208ENST00000538827 CCDC187A0A096LP49 1063 aa13.33□□□□□ -0.28
CD4-208ENST00000538827 PMS2P1A4D2B8 440 aa13.33□□□□□ -0.28
CD4-208ENST00000538827 FAM227AF5H4B4 570 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms