RNA–Protein interactions for RNA: ENST00000538545.6

ACTN1-205, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 2,813 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-205ENST00000538545 CSF3RQ99062 836 aa13.38□□□□□ -0.27
ACTN1-205ENST00000538545 YIPF3Q9GZM5 350 aa13.38□□□□□ -0.27
ACTN1-205ENST00000538545 NT5DC2Q9H857 520 aa13.38□□□□□ -0.27
ACTN1-205ENST00000538545 ZNF639Q9UID6 485 aa13.38□□□□□ -0.27
ACTN1-205ENST00000538545 RAB23Q9ULC3 237 aa13.38□□□□□ -0.27
ACTN1-205ENST00000538545 SAMD4AQ9UPU9 718 aaKnown RBP13.38□□□□□ -0.27
ACTN1-205ENST00000538545 SH3GLB1Q9Y371 365 aa13.38□□□□□ -0.27
ACTN1-205ENST00000538545 ASB4Q9Y574 426 aa13.38□□□□□ -0.27
ACTN1-205ENST00000538545 MYF5P13349 255 aa13.38□□□□□ -0.27
ACTN1-205ENST00000538545 GPC1P35052 558 aa13.38□□□□□ -0.27
ACTN1-205ENST00000538545 HSPA13P48723 471 aa13.38□□□□□ -0.27
ACTN1-205ENST00000538545 NCBP2P52298 156 aaKnown RBP eCLIP13.38□□□□□ -0.27
ACTN1-205ENST00000538545 KCNJ10P78508 379 aa13.38□□□□□ -0.27
ACTN1-205ENST00000538545 RPL6Q02878 288 aaKnown RBP13.38□□□□□ -0.27
ACTN1-205ENST00000538545 HHEXQ03014 270 aa13.38□□□□□ -0.27
ACTN1-205ENST00000538545 DAG1Q14118 895 aa13.38□□□□□ -0.27
ACTN1-205ENST00000538545 GCNT6Q5T4J0 391 aa13.38□□□□□ -0.27
ACTN1-205ENST00000538545 TRIM40Q6P9F5 258 aa13.38□□□□□ -0.27
ACTN1-205ENST00000538545 FIGLAQ6QHK4 219 aa13.38□□□□□ -0.27
ACTN1-205ENST00000538545 IKBIPQ70UQ0 350 aa13.38□□□□□ -0.27
ACTN1-205ENST00000538545 DHRSXQ8N5I4 330 aa13.38□□□□□ -0.27
ACTN1-205ENST00000538545 OR5T3Q8NGG3 340 aa13.38□□□□□ -0.27
ACTN1-205ENST00000538545 COL26A1Q96A83 441 aa13.38□□□□□ -0.27
ACTN1-205ENST00000538545 HSPA12BQ96MM6 686 aa13.38□□□□□ -0.27
ACTN1-205ENST00000538545 MUS81Q96NY9 551 aa13.38□□□□□ -0.27
ACTN1-205ENST00000538545 WFDC6Q9BQY6 131 aa13.38□□□□□ -0.27
ACTN1-205ENST00000538545 ANKRD60Q9BZ19 345 aa13.38□□□□□ -0.27
ACTN1-205ENST00000538545 TOR3AQ9H497 397 aa13.38□□□□□ -0.27
ACTN1-205ENST00000538545 FAM60AQ9NP50 221 aa13.38□□□□□ -0.27
ACTN1-205ENST00000538545 CEP192Q8TEP8 1941 aa13.38□□□□□ -0.27
ACTN1-205ENST00000538545 NCOR1O75376 2440 aa13.38□□□□□ -0.27
ACTN1-205ENST00000538545 NDUFS2O75306 463 aa13.37□□□□□ -0.27
ACTN1-205ENST00000538545 IGLV3-19P01714 112 aa13.37□□□□□ -0.27
ACTN1-205ENST00000538545 C7P10643 843 aa13.37□□□□□ -0.27
ACTN1-205ENST00000538545 ELK4P28324 431 aa13.37□□□□□ -0.27
ACTN1-205ENST00000538545 EPHA2P29317 976 aa13.37□□□□□ -0.27
ACTN1-205ENST00000538545 ABATP80404 500 aa13.37□□□□□ -0.27
ACTN1-205ENST00000538545 CDK6Q00534 326 aa13.37□□□□□ -0.27
ACTN1-205ENST00000538545 ADPRMQ3LIE5 342 aa13.37□□□□□ -0.27
ACTN1-205ENST00000538545 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.37□□□□□ -0.27
ACTN1-205ENST00000538545 C6orf120Q7Z4R8 191 aa13.37□□□□□ -0.27
ACTN1-205ENST00000538545 TRIML2Q8N7C3 387 aa13.37□□□□□ -0.27
ACTN1-205ENST00000538545 MFSD9Q8NBP5 474 aa13.37□□□□□ -0.27
ACTN1-205ENST00000538545 ZDHHC1Q8WTX9 485 aa13.37□□□□□ -0.27
ACTN1-205ENST00000538545 OR2A5Q96R48 311 aa13.37□□□□□ -0.27
ACTN1-205ENST00000538545 NLNQ9BYT8 704 aa13.37□□□□□ -0.27
ACTN1-205ENST00000538545 AMBRA1Q9C0C7 1298 aa13.37□□□□□ -0.27
ACTN1-205ENST00000538545 IL21RQ9HBE5 538 aa13.37□□□□□ -0.27
ACTN1-205ENST00000538545 IL1RAPQ9NPH3 570 aa13.37□□□□□ -0.27
ACTN1-205ENST00000538545 EQTNQ9NQ60 294 aa13.37□□□□□ -0.27
ACTN1-205ENST00000538545 RHCGQ9UBD6 479 aa13.37□□□□□ -0.27
ACTN1-205ENST00000538545 EML5Q05BV3 1969 aa13.37□□□□□ -0.27
ACTN1-205ENST00000538545 PRAMEF27A3QJZ7 478 aa13.37□□□□□ -0.27
ACTN1-205ENST00000538545 CSNK1EP49674 416 aaKnown RBP13.37□□□□□ -0.27
ACTN1-205ENST00000538545 DUSP7Q16829 419 aa13.37□□□□□ -0.27
ACTN1-205ENST00000538545 EIF3MQ7L2H7 374 aaKnown RBP13.37□□□□□ -0.27
ACTN1-205ENST00000538545 ZCCHC7Q8N3Z6 543 aaKnown RBP13.37□□□□□ -0.27
ACTN1-205ENST00000538545 SGCDQ92629 289 aa13.37□□□□□ -0.27
ACTN1-205ENST00000538545 KAT2AQ92830 837 aa13.37□□□□□ -0.27
ACTN1-205ENST00000538545 KCNC2Q96PR1 638 aa13.37□□□□□ -0.27
ACTN1-205ENST00000538545 EPS8L2Q9H6S3 715 aa13.37□□□□□ -0.27
ACTN1-205ENST00000538545 SNX7Q9UNH6 387 aa13.37□□□□□ -0.27
ACTN1-205ENST00000538545 TESMINQ9Y4I5 508 aa13.37□□□□□ -0.27
ACTN1-205ENST00000538545 FABP3P05413 133 aa13.36□□□□□ -0.27
ACTN1-205ENST00000538545 TFAP2AP05549 437 aa13.36□□□□□ -0.27
ACTN1-205ENST00000538545 GSSP48637 474 aa13.36□□□□□ -0.27
ACTN1-205ENST00000538545 CCT3P49368 545 aaKnown RBP13.36□□□□□ -0.27
ACTN1-205ENST00000538545 ALDH3A2P51648 485 aa13.36□□□□□ -0.27
ACTN1-205ENST00000538545 CCR5P51681 352 aa13.36□□□□□ -0.27
ACTN1-205ENST00000538545 SIM1P81133 766 aaPredicted RBP13.36□□□□□ -0.27
ACTN1-205ENST00000538545 TMEM107Q6UX40 140 aa13.36□□□□□ -0.27
ACTN1-205ENST00000538545 CYP4Z1Q86W10 505 aa13.36□□□□□ -0.27
ACTN1-205ENST00000538545 PARGQ86W56 976 aa13.36□□□□□ -0.27
ACTN1-205ENST00000538545 ST13P4Q8IZP2 240 aaPredicted RBP13.36□□□□□ -0.27
ACTN1-205ENST00000538545 SUN3Q8TAQ9 357 aa13.36□□□□□ -0.27
ACTN1-205ENST00000538545 LMX1AQ8TE12 382 aa13.36□□□□□ -0.27
ACTN1-205ENST00000538545 MTERF3Q96E29 417 aa13.36□□□□□ -0.27
ACTN1-205ENST00000538545 C16orf58Q96GQ5 468 aa13.36□□□□□ -0.27
ACTN1-205ENST00000538545 AMDHD1Q96NU7 426 aa13.36□□□□□ -0.27
ACTN1-205ENST00000538545 GSDMCQ9BYG8 508 aa13.36□□□□□ -0.27
ACTN1-205ENST00000538545 ASPSCR1Q9BZE9 553 aa13.36□□□□□ -0.27
ACTN1-205ENST00000538545 CXorf56Q9H5V9 222 aa13.36□□□□□ -0.27
ACTN1-205ENST00000538545 SLC35C2Q9NQQ7 365 aa13.36□□□□□ -0.27
ACTN1-205ENST00000538545 OR2A25A4D2G3 310 aa13.36□□□□□ -0.27
ACTN1-205ENST00000538545 SUV39H1O43463 412 aa13.36□□□□□ -0.27
ACTN1-205ENST00000538545 OR12D1P0DN82 309 aa13.36□□□□□ -0.27
ACTN1-205ENST00000538545 ETS2P15036 469 aa13.36□□□□□ -0.27
ACTN1-205ENST00000538545 NDUFS1P28331 727 aa13.36□□□□□ -0.27
ACTN1-205ENST00000538545 AHRP35869 848 aa13.36□□□□□ -0.27
ACTN1-205ENST00000538545 UBE2IP63279 158 aaKnown RBP13.36□□□□□ -0.27
ACTN1-205ENST00000538545 SYPL1Q16563 259 aa13.36□□□□□ -0.27
ACTN1-205ENST00000538545 DEFB133Q30KQ1 61 aa13.36□□□□□ -0.27
ACTN1-205ENST00000538545 IQCCQ4KMZ1 466 aa13.36□□□□□ -0.27
ACTN1-205ENST00000538545 ERICH5Q6P6B1 374 aa13.36□□□□□ -0.27
ACTN1-205ENST00000538545 ASPGQ86U10 573 aa13.36□□□□□ -0.27
ACTN1-205ENST00000538545 OR52E4Q8NGH9 312 aa13.36□□□□□ -0.27
ACTN1-205ENST00000538545 UTP15Q8TED0 518 aaKnown RBP13.36□□□□□ -0.27
ACTN1-205ENST00000538545 SLC38A5Q8WUX1 472 aa13.36□□□□□ -0.27
ACTN1-205ENST00000538545 XAGE5Q8WWM1 108 aa13.36□□□□□ -0.27
ACTN1-205ENST00000538545 BBS4Q96RK4 519 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms