RNA–Protein interactions for RNA: ENST00000538475.5

USP28-207, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 1,081 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-207ENST00000538475 SGTAO43765 313 aa6.4□□□□□ -1.38
USP28-207ENST00000538475 SLC28A2O43868 658 aa6.4□□□□□ -1.38
USP28-207ENST00000538475 GMDSO60547 372 aa6.4□□□□□ -1.38
USP28-207ENST00000538475 TPST2O60704 377 aa6.4□□□□□ -1.38
USP28-207ENST00000538475 SNAPINO95295 136 aa6.4□□□□□ -1.38
USP28-207ENST00000538475 MT-CYBP00156 380 aaPredicted RBP6.4□□□□□ -1.38
USP28-207ENST00000538475 GLUD1P00367 558 aa6.4□□□□□ -1.38
USP28-207ENST00000538475 PF4P02776 101 aa6.4□□□□□ -1.38
USP28-207ENST00000538475 HLA-DQB2P05538 268 aa6.4□□□□□ -1.38
USP28-207ENST00000538475 EBLN1P0CF75 366 aa6.4□□□□□ -1.38
USP28-207ENST00000538475 CYP4B1P13584 511 aa6.4□□□□□ -1.38
USP28-207ENST00000538475 UGT2B7P16662 529 aa6.4□□□□□ -1.38
USP28-207ENST00000538475 CTPS1P17812 591 aa6.4□□□□□ -1.38
USP28-207ENST00000538475 ITGB6P18564 788 aa6.4□□□□□ -1.38
USP28-207ENST00000538475 POU3F3P20264 500 aaPredicted RBP6.4□□□□□ -1.38
USP28-207ENST00000538475 UBA1P22314 1058 aaKnown RBP6.4□□□□□ -1.38
USP28-207ENST00000538475 ADORA2BP29275 332 aa6.4□□□□□ -1.38
USP28-207ENST00000538475 PTPN6P29350 595 aa6.4□□□□□ -1.38
USP28-207ENST00000538475 SLC6A1P30531 599 aa6.4□□□□□ -1.38
USP28-207ENST00000538475 CCT3P49368 545 aaKnown RBP6.4□□□□□ -1.38
USP28-207ENST00000538475 TTPAP49638 278 aa6.4□□□□□ -1.38
USP28-207ENST00000538475 EVX1P49640 407 aa6.4□□□□□ -1.38
USP28-207ENST00000538475 TAF6P49848 677 aa6.4□□□□□ -1.38
USP28-207ENST00000538475 ERVPABLB-1P60509 514 aa6.4□□□□□ -1.38
USP28-207ENST00000538475 IL1RL1Q01638 556 aa6.4□□□□□ -1.38
USP28-207ENST00000538475 RBBP4Q09028 425 aa6.4□□□□□ -1.38
USP28-207ENST00000538475 MTAPQ13126 283 aa6.4□□□□□ -1.38
USP28-207ENST00000538475 PPIGQ13427 754 aaKnown RBP eCLIP6.4□□□□□ -1.38
USP28-207ENST00000538475 ADAM15Q13444 863 aa6.4□□□□□ -1.38
USP28-207ENST00000538475 TPBGQ13641 420 aa6.4□□□□□ -1.38
USP28-207ENST00000538475 DMC1Q14565 340 aa6.4□□□□□ -1.38
USP28-207ENST00000538475 ZNF267Q14586 743 aaPredicted RBP6.4□□□□□ -1.38
USP28-207ENST00000538475 MED22Q15528 200 aa6.4□□□□□ -1.38
USP28-207ENST00000538475 DUOXA1Q1HG43 343 aa6.4□□□□□ -1.38
USP28-207ENST00000538475 PLK5Q496M5 336 aa6.4□□□□□ -1.38
USP28-207ENST00000538475 USP39Q53GS9 565 aaKnown RBP6.4□□□□□ -1.38
USP28-207ENST00000538475 FBXO47Q5MNV8 452 aa6.4□□□□□ -1.38
USP28-207ENST00000538475 FAM72AQ5TYM5 149 aa6.4□□□□□ -1.38
USP28-207ENST00000538475 C9orf57Q5W0N0 161 aa6.4□□□□□ -1.38
USP28-207ENST00000538475 B3GNTL1Q67FW5 361 aaPredicted RBP6.4□□□□□ -1.38
USP28-207ENST00000538475 FAM72DQ6L9T8 149 aa6.4□□□□□ -1.38
USP28-207ENST00000538475 AFTPHQ6ULP2 937 aa6.4□□□□□ -1.38
USP28-207ENST00000538475 RTL4Q6ZR62 310 aa6.4□□□□□ -1.38
USP28-207ENST00000538475 IKBIPQ70UQ0 350 aa6.4□□□□□ -1.38
USP28-207ENST00000538475 TRILQ7L0X0 811 aa6.4□□□□□ -1.38
USP28-207ENST00000538475 GPR155Q7Z3F1 870 aa6.4□□□□□ -1.38
USP28-207ENST00000538475 ADGRD2Q7Z7M1 963 aa6.4□□□□□ -1.38
USP28-207ENST00000538475 FAM72BQ86X60 149 aa6.4□□□□□ -1.38
USP28-207ENST00000538475 LAX1Q8IWV1 398 aa6.4□□□□□ -1.38
USP28-207ENST00000538475 BBS7Q8IWZ6 715 aa6.4□□□□□ -1.38
USP28-207ENST00000538475 TMEM192Q8IY95 271 aa6.4□□□□□ -1.38
USP28-207ENST00000538475 UMODL1-AS1Q8N2C9 162 aa6.4□□□□□ -1.38
USP28-207ENST00000538475 STK40Q8N2I9 435 aa6.4□□□□□ -1.38
USP28-207ENST00000538475 UBE2J2Q8N2K1 259 aa6.4□□□□□ -1.38
USP28-207ENST00000538475 Q8N402 240 aa6.4□□□□□ -1.38
USP28-207ENST00000538475 STPG2Q8N412 459 aa6.4□□□□□ -1.38
USP28-207ENST00000538475 LINC01465Q8N7H1 131 aa6.4□□□□□ -1.38
USP28-207ENST00000538475 NANOGP1Q8N7R0 232 aa6.4□□□□□ -1.38
USP28-207ENST00000538475 B3GALNT2Q8NCR0 500 aa6.4□□□□□ -1.38
USP28-207ENST00000538475 OR4C15Q8NGM1 316 aa6.4□□□□□ -1.38
USP28-207ENST00000538475 NELL1Q92832 810 aa6.4□□□□□ -1.38
USP28-207ENST00000538475 NXPE2Q96DL1 559 aa6.4□□□□□ -1.38
USP28-207ENST00000538475 PGLYRP2Q96PD5 576 aa6.4□□□□□ -1.38
USP28-207ENST00000538475 PPP1R16BQ96T49 567 aa6.4□□□□□ -1.38
USP28-207ENST00000538475 DPH2Q9BQC3 489 aaPredicted RBP6.4□□□□□ -1.38
USP28-207ENST00000538475 SYT17Q9BSW7 474 aa6.4□□□□□ -1.38
USP28-207ENST00000538475 DOHHQ9BU89 302 aa6.4□□□□□ -1.38
USP28-207ENST00000538475 CNPPD1Q9BV87 410 aa6.4□□□□□ -1.38
USP28-207ENST00000538475 DNTTIP1Q9H147 329 aa6.4□□□□□ -1.38
USP28-207ENST00000538475 TNKS2Q9H2K2 1166 aa6.4□□□□□ -1.38
USP28-207ENST00000538475 LRTM1Q9HBL6 345 aa6.4□□□□□ -1.38
USP28-207ENST00000538475 ABCB9Q9NP78 766 aa6.4□□□□□ -1.38
USP28-207ENST00000538475 SERHLQ9NQF3 203 aa6.4□□□□□ -1.38
USP28-207ENST00000538475 MRPS18AQ9NVS2 196 aaKnown RBP6.4□□□□□ -1.38
USP28-207ENST00000538475 NLE1Q9NVX2 485 aaPredicted RBP6.4□□□□□ -1.38
USP28-207ENST00000538475 FAM120CQ9NX05 1096 aaKnown RBP6.4□□□□□ -1.38
USP28-207ENST00000538475 DDIT4Q9NX09 232 aa6.4□□□□□ -1.38
USP28-207ENST00000538475 MS4A12Q9NXJ0 267 aa6.4□□□□□ -1.38
USP28-207ENST00000538475 GPR83Q9NYM4 423 aa6.4□□□□□ -1.38
USP28-207ENST00000538475 UBP1Q9NZI7 540 aa6.4□□□□□ -1.38
USP28-207ENST00000538475 MBD2Q9UBB5 411 aa6.4□□□□□ -1.38
USP28-207ENST00000538475 PLEKHB1Q9UF11 243 aaPredicted RBP6.4□□□□□ -1.38
USP28-207ENST00000538475 ZNF214Q9UL59 606 aaPredicted RBP6.4□□□□□ -1.38
USP28-207ENST00000538475 ABCG2Q9UNQ0 655 aa6.4□□□□□ -1.38
USP28-207ENST00000538475 BAIAP2Q9UQB8 552 aa6.4□□□□□ -1.38
USP28-207ENST00000538475 SNX8Q9Y5X2 465 aa6.4□□□□□ -1.38
USP28-207ENST00000538475 NUBP2Q9Y5Y2 271 aa6.4□□□□□ -1.38
USP28-207ENST00000538475 NPTNQ9Y639 398 aa6.4□□□□□ -1.38
USP28-207ENST00000538475 KIAA1671Q9BY89 1806 aa6.39□□□□□ -1.39
USP28-207ENST00000538475 MEIKINA0A087WXM9 373 aa6.39□□□□□ -1.39
USP28-207ENST00000538475 TRDV1A0A1B0GX56 115 aa6.39□□□□□ -1.39
USP28-207ENST00000538475 A0A1W2PPL8 197 aa6.39□□□□□ -1.39
USP28-207ENST00000538475 PIPSLA2A3N6 862 aa6.39□□□□□ -1.39
USP28-207ENST00000538475 MFSD2BA6NFX1 497 aa6.39□□□□□ -1.39
USP28-207ENST00000538475 OR6C65A6NJZ3 312 aa6.39□□□□□ -1.39
USP28-207ENST00000538475 ZNF98A6NK75 572 aa6.39□□□□□ -1.39
USP28-207ENST00000538475 A8MXK9 166 aa6.39□□□□□ -1.39
USP28-207ENST00000538475 TNFRSF11BO00300 401 aa6.39□□□□□ -1.39
USP28-207ENST00000538475 PCDH17O14917 1159 aa6.39□□□□□ -1.39
USP28-207ENST00000538475 B4GALT5O43286 388 aa6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms