RNA–Protein interactions for RNA: ENST00000537047.5

CCDC7-208, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-208ENST00000537047 ABI3BPQ7Z7G0 1075 aa3.12□□□□□ -1.91
CCDC7-208ENST00000537047 OR2L5Q8NG80 312 aa3.12□□□□□ -1.91
CCDC7-208ENST00000537047 GPR148Q8TDV2 347 aa3.12□□□□□ -1.91
CCDC7-208ENST00000537047 AFAP1L1Q8TED9 768 aa3.12□□□□□ -1.91
CCDC7-208ENST00000537047 BPIFA2Q96DR5 249 aa3.12□□□□□ -1.91
CCDC7-208ENST00000537047 RAB3IPQ96QF0 476 aaPredicted RBP3.12□□□□□ -1.91
CCDC7-208ENST00000537047 CCT8L2Q96SF2 557 aa3.12□□□□□ -1.91
CCDC7-208ENST00000537047 ANKRD2Q9GZV1 360 aa3.12□□□□□ -1.91
CCDC7-208ENST00000537047 UBE2TQ9NPD8 197 aaPredicted RBP3.12□□□□□ -1.91
CCDC7-208ENST00000537047 PDRG1Q9NUG6 133 aa3.12□□□□□ -1.91
CCDC7-208ENST00000537047 C5AR2Q9P296 337 aa3.12□□□□□ -1.91
CCDC7-208ENST00000537047 CFDP1Q9UEE9 299 aaPredicted RBP3.12□□□□□ -1.91
CCDC7-208ENST00000537047 MEGF6O75095 1541 aa3.12□□□□□ -1.91
CCDC7-208ENST00000537047 IGHV3-35A0A0C4DH35 117 aa3.11□□□□□ -1.91
CCDC7-208ENST00000537047 FRG2CA6NGY1 282 aa3.11□□□□□ -1.91
CCDC7-208ENST00000537047 ZNF861PO60384 105 aa3.11□□□□□ -1.91
CCDC7-208ENST00000537047 PGAM2P15259 253 aa3.11□□□□□ -1.91
CCDC7-208ENST00000537047 SRD5A2P31213 254 aa3.11□□□□□ -1.91
CCDC7-208ENST00000537047 FNTAP49354 379 aa3.11□□□□□ -1.91
CCDC7-208ENST00000537047 RAD23AP54725 363 aa3.11□□□□□ -1.91
CCDC7-208ENST00000537047 ZNF273Q14593 569 aa3.11□□□□□ -1.91
CCDC7-208ENST00000537047 C6orf136Q5SQH8 315 aa3.11□□□□□ -1.91
CCDC7-208ENST00000537047 FAM46CQ5VWP2 391 aa3.11□□□□□ -1.91
CCDC7-208ENST00000537047 KLHL10Q6JEL2 608 aa3.11□□□□□ -1.91
CCDC7-208ENST00000537047 RPUSD3Q6P087 351 aaKnown RBP3.11□□□□□ -1.91
CCDC7-208ENST00000537047 Q6P435 159 aa3.11□□□□□ -1.91
CCDC7-208ENST00000537047 DZIP1Q86YF9 867 aaKnown RBP3.11□□□□□ -1.91
CCDC7-208ENST00000537047 TDHQ8IZJ6 230 aa3.11□□□□□ -1.91
CCDC7-208ENST00000537047 OR8H2Q8N162 312 aa3.11□□□□□ -1.91
CCDC7-208ENST00000537047 VSIG2Q96IQ7 327 aa3.11□□□□□ -1.91
CCDC7-208ENST00000537047 FAM129AQ9BZQ8 928 aa3.11□□□□□ -1.91
CCDC7-208ENST00000537047 OR10A4Q9H209 315 aa3.11□□□□□ -1.91
CCDC7-208ENST00000537047 PCDHGA1Q9Y5H4 931 aa3.11□□□□□ -1.91
CCDC7-208ENST00000537047 ARHGEF37A1IGU5 675 aa3.1□□□□□ -1.91
CCDC7-208ENST00000537047 TMCO5BA8MYB1 307 aa3.1□□□□□ -1.91
CCDC7-208ENST00000537047 SLC33A1O00400 549 aaPredicted RBP3.1□□□□□ -1.91
CCDC7-208ENST00000537047 PLOD3O60568 738 aa3.1□□□□□ -1.91
CCDC7-208ENST00000537047 MOCS2O96007 188 aaPredicted RBP3.1□□□□□ -1.91
CCDC7-208ENST00000537047 RPN1P04843 607 aaKnown RBP3.1□□□□□ -1.91
CCDC7-208ENST00000537047 APOA4P06727 396 aa3.1□□□□□ -1.91
CCDC7-208ENST00000537047 SP9P0CG40 484 aa3.1□□□□□ -1.91
CCDC7-208ENST00000537047 PDGFRAP16234 1089 aa3.1□□□□□ -1.91
CCDC7-208ENST00000537047 LBPP18428 481 aa3.1□□□□□ -1.91
CCDC7-208ENST00000537047 PTAFRP25105 342 aa3.1□□□□□ -1.91
CCDC7-208ENST00000537047 TNK1Q13470 666 aa3.1□□□□□ -1.91
CCDC7-208ENST00000537047 ZNF770Q6IQ21 691 aaPredicted RBP3.1□□□□□ -1.91
CCDC7-208ENST00000537047 TIGD4Q8IY51 512 aa3.1□□□□□ -1.91
CCDC7-208ENST00000537047 OR13C5Q8NGS8 318 aa3.1□□□□□ -1.91
CCDC7-208ENST00000537047 RAD54LQ92698 747 aa3.1□□□□□ -1.91
CCDC7-208ENST00000537047 SIPA1Q96FS4 1042 aa3.1□□□□□ -1.91
CCDC7-208ENST00000537047 FER1L6-AS2Q96M78 137 aa3.1□□□□□ -1.91
CCDC7-208ENST00000537047 MTIF3Q9H2K0 278 aaKnown RBP3.1□□□□□ -1.91
CCDC7-208ENST00000537047 CLIC5Q9NZA1 410 aa3.1□□□□□ -1.91
CCDC7-208ENST00000537047 NACAE9PAV3 2078 aa3.09□□□□□ -1.91
CCDC7-208ENST00000537047 FLRT2O43155 660 aa3.09□□□□□ -1.91
CCDC7-208ENST00000537047 PPIP5K2O43314 1243 aa3.09□□□□□ -1.91
CCDC7-208ENST00000537047 ACSL4O60488 711 aa3.09□□□□□ -1.91
CCDC7-208ENST00000537047 ACTL6AO96019 429 aa3.09□□□□□ -1.91
CCDC7-208ENST00000537047 ASNSP08243 561 aa3.09□□□□□ -1.91
CCDC7-208ENST00000537047 VIMP08670 466 aaKnown RBP3.09□□□□□ -1.91
CCDC7-208ENST00000537047 CCDC159P0C7I6 412 aa3.09□□□□□ -1.91
CCDC7-208ENST00000537047 BDNFP23560 247 aa3.09□□□□□ -1.91
CCDC7-208ENST00000537047 PSMB4P28070 264 aa3.09□□□□□ -1.91
CCDC7-208ENST00000537047 MAGEA9P43362 315 aa3.09□□□□□ -1.91
CCDC7-208ENST00000537047 NPY4RP50391 375 aa3.09□□□□□ -1.91
CCDC7-208ENST00000537047 CAPZA1P52907 286 aa3.09□□□□□ -1.91
CCDC7-208ENST00000537047 MECOMQ03112 1051 aa3.09□□□□□ -1.91
CCDC7-208ENST00000537047 SHEQ5VZ18 495 aa3.09□□□□□ -1.91
CCDC7-208ENST00000537047 PLPP4Q5VZY2 271 aa3.09□□□□□ -1.91
CCDC7-208ENST00000537047 CLEC4GQ6UXB4 293 aa3.09□□□□□ -1.91
CCDC7-208ENST00000537047 C4orf19Q8IY42 314 aa3.09□□□□□ -1.91
CCDC7-208ENST00000537047 CLEC1AQ8NC01 280 aa3.09□□□□□ -1.91
CCDC7-208ENST00000537047 NCOA7Q8NI08 942 aa3.09□□□□□ -1.91
CCDC7-208ENST00000537047 SETD6Q8TBK2 473 aa3.09□□□□□ -1.91
CCDC7-208ENST00000537047 HEXDCQ8WVB3 486 aa3.09□□□□□ -1.91
CCDC7-208ENST00000537047 GBP5Q96PP8 586 aa3.09□□□□□ -1.91
CCDC7-208ENST00000537047 INPP5KQ9BT40 448 aa3.09□□□□□ -1.91
CCDC7-208ENST00000537047 AP1M1Q9BXS5 423 aa3.09□□□□□ -1.91
CCDC7-208ENST00000537047 UBQLN3Q9H347 655 aa3.09□□□□□ -1.91
CCDC7-208ENST00000537047 NFKBIL1Q9UBC1 381 aaPredicted RBP3.09□□□□□ -1.91
CCDC7-208ENST00000537047 GMEB2Q9UKD1 530 aa3.09□□□□□ -1.91
CCDC7-208ENST00000537047 ZFP37Q9Y6Q3 630 aaPredicted RBP3.09□□□□□ -1.91
CCDC7-208ENST00000537047 A0A087WV48 116 aa3.08□□□□□ -1.92
CCDC7-208ENST00000537047 C2orf92A0A1B0GVN3 265 aa3.08□□□□□ -1.92
CCDC7-208ENST00000537047 FAM231BA6NCW3 169 aa3.08□□□□□ -1.92
CCDC7-208ENST00000537047 APBB3O95704 486 aa3.08□□□□□ -1.92
CCDC7-208ENST00000537047 FHP07954 510 aa3.08□□□□□ -1.92
CCDC7-208ENST00000537047 SLC35E2P0CK97 266 aa3.08□□□□□ -1.92
CCDC7-208ENST00000537047 CRKLP46109 303 aaKnown RBP3.08□□□□□ -1.92
CCDC7-208ENST00000537047 ZNF41P51814 821 aaPredicted RBP3.08□□□□□ -1.92
CCDC7-208ENST00000537047 C14orf28Q4W4Y0 310 aa3.08□□□□□ -1.92
CCDC7-208ENST00000537047 FAM91A1Q658Y4 838 aa3.08□□□□□ -1.92
CCDC7-208ENST00000537047 SLFN11Q7Z7L1 901 aa3.08□□□□□ -1.92
CCDC7-208ENST00000537047 GANCQ8TET4 914 aa3.08□□□□□ -1.92
CCDC7-208ENST00000537047 SLCO4A1Q96BD0 722 aa3.08□□□□□ -1.92
CCDC7-208ENST00000537047 FAF2Q96CS3 445 aa3.08□□□□□ -1.92
CCDC7-208ENST00000537047 RBM18Q96H35 190 aaKnown RBP3.08□□□□□ -1.92
CCDC7-208ENST00000537047 CDHR1Q96JP9 859 aa3.08□□□□□ -1.92
CCDC7-208ENST00000537047 TSSK2Q96PF2 358 aa3.08□□□□□ -1.92
CCDC7-208ENST00000537047 BAG1Q99933 345 aaPredicted RBP3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms