RNA–Protein interactions for RNA: ENST00000536603.5

CCDC61-201, Transcript of coiled-coil domain containing 61, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC61, Length 1,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61-201ENST00000536603 ADAMTS18Q8TE60 1221 aa16.85■□□□□ 0.29
CCDC61-201ENST00000536603 SELENOMQ8WWX9 145 aa16.85■□□□□ 0.29
CCDC61-201ENST00000536603 TM9SF4Q92544 642 aa16.85■□□□□ 0.29
CCDC61-201ENST00000536603 FAM111AQ96PZ2 611 aa16.85■□□□□ 0.29
CCDC61-201ENST00000536603 CSF3RQ99062 836 aa16.85■□□□□ 0.29
CCDC61-201ENST00000536603 SERPINI1Q99574 410 aa16.85■□□□□ 0.29
CCDC61-201ENST00000536603 WDR77Q9BQA1 342 aaPredicted RBP16.85■□□□□ 0.29
CCDC61-201ENST00000536603 LYRM4Q9HD34 91 aa16.85■□□□□ 0.29
CCDC61-201ENST00000536603 KCNK9Q9NPC2 374 aa16.85■□□□□ 0.29
CCDC61-201ENST00000536603 NECTIN3Q9NQS3 549 aa16.85■□□□□ 0.29
CCDC61-201ENST00000536603 PRTFDC1Q9NRG1 225 aa16.85■□□□□ 0.29
CCDC61-201ENST00000536603 FBXW2Q9UKT8 454 aa16.85■□□□□ 0.29
CCDC61-201ENST00000536603 PPT2Q9UMR5 302 aa16.85■□□□□ 0.29
CCDC61-201ENST00000536603 SNX6Q9UNH7 406 aa16.85■□□□□ 0.29
CCDC61-201ENST00000536603 MRPS33Q9Y291 106 aaKnown RBP16.85■□□□□ 0.29
CCDC61-201ENST00000536603 COPG1Q9Y678 874 aaKnown RBP16.85■□□□□ 0.29
CCDC61-201ENST00000536603 MYO9AB2RTY4 2548 aa16.84■□□□□ 0.29
CCDC61-201ENST00000536603 TMEM120BA0PK00 339 aa16.84■□□□□ 0.29
CCDC61-201ENST00000536603 PDYNP01213 254 aa16.84■□□□□ 0.29
CCDC61-201ENST00000536603 SERPINA7P05543 415 aa16.84■□□□□ 0.29
CCDC61-201ENST00000536603 BSGP35613 385 aa16.84■□□□□ 0.29
CCDC61-201ENST00000536603 ETV4P43268 484 aa16.84■□□□□ 0.29
CCDC61-201ENST00000536603 TSFMP43897 325 aaKnown RBP16.84■□□□□ 0.29
CCDC61-201ENST00000536603 ARFIP1P53367 373 aa16.84■□□□□ 0.29
CCDC61-201ENST00000536603 DNAJB13P59910 316 aa16.84■□□□□ 0.29
CCDC61-201ENST00000536603 BTBD16Q32M84 506 aa16.84■□□□□ 0.29
CCDC61-201ENST00000536603 CFAP157Q5JU67 520 aa16.84■□□□□ 0.29
CCDC61-201ENST00000536603 TCHHL1Q5QJ38 904 aaPredicted RBP16.84■□□□□ 0.29
CCDC61-201ENST00000536603 AGAP7PQ5VUJ5 663 aa16.84■□□□□ 0.29
CCDC61-201ENST00000536603 PAPD4Q6PIY7 484 aaKnown RBP16.84■□□□□ 0.29
CCDC61-201ENST00000536603 C10orf107Q8IVU9 208 aa16.84■□□□□ 0.29
CCDC61-201ENST00000536603 ZNF595Q8IYB9 648 aa16.84■□□□□ 0.29
CCDC61-201ENST00000536603 ZADH2Q8N4Q0 377 aa16.84■□□□□ 0.29
CCDC61-201ENST00000536603 GOLGA6L1Q8N7Z2 621 aa16.84■□□□□ 0.29
CCDC61-201ENST00000536603 METTL6Q8TCB7 284 aa16.84■□□□□ 0.29
CCDC61-201ENST00000536603 AGAP4Q96P64 663 aa16.84■□□□□ 0.29
CCDC61-201ENST00000536603 LPAR4Q99677 370 aa16.84■□□□□ 0.29
CCDC61-201ENST00000536603 ZNF717Q9BY31 904 aaPredicted RBP16.84■□□□□ 0.29
CCDC61-201ENST00000536603 ZBTB20Q9HC78 741 aaPredicted RBP16.84■□□□□ 0.29
CCDC61-201ENST00000536603 MID2Q9UJV3 735 aa16.84■□□□□ 0.29
CCDC61-201ENST00000536603 STK38LQ9Y2H1 464 aa16.84■□□□□ 0.29
CCDC61-201ENST00000536603 MMACHCQ9Y4U1 282 aa16.84■□□□□ 0.29
CCDC61-201ENST00000536603 IGKV3D-11A0A0A0MRZ8 115 aa16.83■□□□□ 0.28
CCDC61-201ENST00000536603 WIPF3A6NGB9 483 aa16.83■□□□□ 0.28
CCDC61-201ENST00000536603 A8MUA0 341 aa16.83■□□□□ 0.28
CCDC61-201ENST00000536603 MANBAO00462 879 aa16.83■□□□□ 0.28
CCDC61-201ENST00000536603 EEDO75530 441 aaKnown RBP16.83■□□□□ 0.28
CCDC61-201ENST00000536603 ITGAMP11215 1152 aa16.83■□□□□ 0.28
CCDC61-201ENST00000536603 CPN2P22792 545 aa16.83■□□□□ 0.28
CCDC61-201ENST00000536603 HMOX2P30519 316 aa16.83■□□□□ 0.28
CCDC61-201ENST00000536603 PKNOX1P55347 436 aa16.83■□□□□ 0.28
CCDC61-201ENST00000536603 HSD17B7P56937 341 aa16.83■□□□□ 0.28
CCDC61-201ENST00000536603 NAA20P61599 178 aa16.83■□□□□ 0.28
CCDC61-201ENST00000536603 NOTCH2Q04721 2471 aa16.83■□□□□ 0.28
CCDC61-201ENST00000536603 SLC13A2Q13183 592 aa16.83■□□□□ 0.28
CCDC61-201ENST00000536603 PCLAFQ15004 111 aa16.83■□□□□ 0.28
CCDC61-201ENST00000536603 LIPMQ5VYY2 423 aa16.83■□□□□ 0.28
CCDC61-201ENST00000536603 RIPOR1Q6ZS17 1223 aa16.83■□□□□ 0.28
CCDC61-201ENST00000536603 CLNKQ7Z7G1 428 aa16.83■□□□□ 0.28
CCDC61-201ENST00000536603 SCUBE1Q8IWY4 988 aa16.83■□□□□ 0.28
CCDC61-201ENST00000536603 ZCCHC7Q8N3Z6 543 aaKnown RBP16.83■□□□□ 0.28
CCDC61-201ENST00000536603 BRIX1Q8TDN6 353 aaKnown RBP16.83■□□□□ 0.28
CCDC61-201ENST00000536603 PSMF1Q92530 271 aa16.83■□□□□ 0.28
CCDC61-201ENST00000536603 HBEGFQ99075 208 aa16.83■□□□□ 0.28
CCDC61-201ENST00000536603 MID1IP1Q9NPA3 183 aa16.83■□□□□ 0.28
CCDC61-201ENST00000536603 SLC12A4Q9UP95 1085 aa16.83■□□□□ 0.28
CCDC61-201ENST00000536603 PRRC2CQ9Y520 2896 aaKnown RBP16.83■□□□□ 0.28
CCDC61-201ENST00000536603 TIMM22Q9Y584 194 aa16.83■□□□□ 0.28
CCDC61-201ENST00000536603 SPACA6W5XKT8 324 aa16.83■□□□□ 0.28
CCDC61-201ENST00000536603 TCRBV16S1A1N1A0A5B0 115 aa16.82■□□□□ 0.28
CCDC61-201ENST00000536603 UBFD1O14562 309 aaKnown RBP16.82■□□□□ 0.28
CCDC61-201ENST00000536603 CTNSO60931 367 aa16.82■□□□□ 0.28
CCDC61-201ENST00000536603 SEMA3DO95025 777 aa16.82■□□□□ 0.28
CCDC61-201ENST00000536603 ESRRBO95718 433 aa16.82■□□□□ 0.28
CCDC61-201ENST00000536603 KRT6AP02538 564 aa16.82■□□□□ 0.28
CCDC61-201ENST00000536603 KRT6BP04259 564 aa16.82■□□□□ 0.28
CCDC61-201ENST00000536603 KRT6CP48668 564 aa16.82■□□□□ 0.28
CCDC61-201ENST00000536603 WDR4P57081 412 aaKnown RBP16.82■□□□□ 0.28
CCDC61-201ENST00000536603 PLAG1Q6DJT9 500 aa16.82■□□□□ 0.28
CCDC61-201ENST00000536603 CYP20A1Q6UW02 462 aa16.82■□□□□ 0.28
CCDC61-201ENST00000536603 FRMD7Q6ZUT3 714 aa16.82■□□□□ 0.28
CCDC61-201ENST00000536603 GPR180Q86V85 440 aa16.82■□□□□ 0.28
CCDC61-201ENST00000536603 NUDT13Q86X67 352 aa16.82■□□□□ 0.28
CCDC61-201ENST00000536603 SIRT6Q8N6T7 355 aa16.82■□□□□ 0.28
CCDC61-201ENST00000536603 ANKRD42Q8N9B4 389 aa16.82■□□□□ 0.28
CCDC61-201ENST00000536603 AGAP11Q8TF27 550 aa16.82■□□□□ 0.28
CCDC61-201ENST00000536603 KCNA7Q96RP8 456 aa16.82■□□□□ 0.28
CCDC61-201ENST00000536603 MRPL1Q9BYD6 325 aaKnown RBP16.82■□□□□ 0.28
CCDC61-201ENST00000536603 DDX31Q9H8H2 851 aaKnown RBP16.82■□□□□ 0.28
CCDC61-201ENST00000536603 BRF2Q9HAW0 419 aa16.82■□□□□ 0.28
CCDC61-201ENST00000536603 AGPAT4Q9NRZ5 378 aa16.82■□□□□ 0.28
CCDC61-201ENST00000536603 MS4A12Q9NXJ0 267 aa16.82■□□□□ 0.28
CCDC61-201ENST00000536603 AHSPQ9NZD4 102 aa16.82■□□□□ 0.28
CCDC61-201ENST00000536603 PTGFRNQ9P2B2 879 aa16.82■□□□□ 0.28
CCDC61-201ENST00000536603 ATG4BQ9Y4P1 393 aa16.82■□□□□ 0.28
CCDC61-201ENST00000536603 CLDN16Q9Y5I7 305 aa16.82■□□□□ 0.28
CCDC61-201ENST00000536603 A0A0A6YYD5 115 aa16.81■□□□□ 0.28
CCDC61-201ENST00000536603 MYOCOSA0A1B0GUC4 107 aa16.81■□□□□ 0.28
CCDC61-201ENST00000536603 TGFBR3LH3BV60 316 aa16.81■□□□□ 0.28
CCDC61-201ENST00000536603 TRIM13O60858 407 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms