RNA–Protein interactions for RNA: ENST00000536429.1

PRKDC-206, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-206ENST00000536429 VPS4BO75351 444 aa12.28□□□□□ -0.44
PRKDC-206ENST00000536429 IFNA16P05015 189 aa12.28□□□□□ -0.44
PRKDC-206ENST00000536429 CHN1P15882 459 aa12.28□□□□□ -0.44
PRKDC-206ENST00000536429 KRT4P19013 534 aa12.28□□□□□ -0.44
PRKDC-206ENST00000536429 TPP2P29144 1249 aaPredicted RBP12.28□□□□□ -0.44
PRKDC-206ENST00000536429 CRHR1P34998 444 aa12.28□□□□□ -0.44
PRKDC-206ENST00000536429 HTR6P50406 440 aa12.28□□□□□ -0.44
PRKDC-206ENST00000536429 TNFRSF17Q02223 184 aa12.28□□□□□ -0.44
PRKDC-206ENST00000536429 SLC18A2Q05940 514 aa12.28□□□□□ -0.44
PRKDC-206ENST00000536429 STX4Q12846 297 aa12.28□□□□□ -0.44
PRKDC-206ENST00000536429 RCN2Q14257 317 aa12.28□□□□□ -0.44
PRKDC-206ENST00000536429 NR6A1Q15406 480 aa12.28□□□□□ -0.44
PRKDC-206ENST00000536429 MEP1AQ16819 746 aa12.28□□□□□ -0.44
PRKDC-206ENST00000536429 C16orf47Q6ZP98 133 aaPredicted RBP12.28□□□□□ -0.44
PRKDC-206ENST00000536429 DGAT2L6Q6ZPD8 337 aa12.28□□□□□ -0.44
PRKDC-206ENST00000536429 ATCAYQ86WG3 371 aa12.28□□□□□ -0.44
PRKDC-206ENST00000536429 RPS19BP1Q86WX3 136 aaKnown RBP12.28□□□□□ -0.44
PRKDC-206ENST00000536429 SLC5A8Q8N695 610 aa12.28□□□□□ -0.44
PRKDC-206ENST00000536429 GALNT11Q8NCW6 608 aa12.28□□□□□ -0.44
PRKDC-206ENST00000536429 GRHL3Q8TE85 626 aa12.28□□□□□ -0.44
PRKDC-206ENST00000536429 PTPMT1Q8WUK0 201 aaPredicted RBP12.28□□□□□ -0.44
PRKDC-206ENST00000536429 CAVIN3Q969G5 261 aa12.28□□□□□ -0.44
PRKDC-206ENST00000536429 L3HYPDHQ96EM0 354 aa12.28□□□□□ -0.44
PRKDC-206ENST00000536429 KCNA7Q96RP8 456 aa12.28□□□□□ -0.44
PRKDC-206ENST00000536429 ZNF382Q96SR6 550 aa12.28□□□□□ -0.44
PRKDC-206ENST00000536429 SERPINI1Q99574 410 aa12.28□□□□□ -0.44
PRKDC-206ENST00000536429 CENPKQ9BS16 269 aa12.28□□□□□ -0.44
PRKDC-206ENST00000536429 PPCSQ9HAB8 311 aa12.28□□□□□ -0.44
PRKDC-206ENST00000536429 TNFRSF12AQ9NP84 129 aa12.28□□□□□ -0.44
PRKDC-206ENST00000536429 ADAP2Q9NPF8 381 aa12.28□□□□□ -0.44
PRKDC-206ENST00000536429 VTI1BQ9UEU0 232 aa12.28□□□□□ -0.44
PRKDC-206ENST00000536429 TRPS1Q9UHF7 1281 aa12.28□□□□□ -0.44
PRKDC-206ENST00000536429 TEKT2Q9UIF3 430 aa12.28□□□□□ -0.44
PRKDC-206ENST00000536429 PPT2Q9UMR5 302 aa12.28□□□□□ -0.44
PRKDC-206ENST00000536429 VPS4AQ9UN37 437 aa12.28□□□□□ -0.44
PRKDC-206ENST00000536429 PPIEQ9UNP9 301 aaKnown RBP12.28□□□□□ -0.44
PRKDC-206ENST00000536429 NBPF19A0A087WUL8 3843 aa12.27□□□□□ -0.44
PRKDC-206ENST00000536429 TRAV17A0A0B4J275 112 aa12.27□□□□□ -0.45
PRKDC-206ENST00000536429 TMEM200CA6NKL6 621 aa12.27□□□□□ -0.45
PRKDC-206ENST00000536429 MANBAO00462 879 aa12.27□□□□□ -0.45
PRKDC-206ENST00000536429 COPEO14579 308 aa12.27□□□□□ -0.45
PRKDC-206ENST00000536429 SEMA3DO95025 777 aa12.27□□□□□ -0.45
PRKDC-206ENST00000536429 AIFM1O95831 613 aa12.27□□□□□ -0.45
PRKDC-206ENST00000536429 DDAH2O95865 285 aa12.27□□□□□ -0.45
PRKDC-206ENST00000536429 KLK1P06870 262 aa12.27□□□□□ -0.45
PRKDC-206ENST00000536429 FAM58BPP0C7Q3 252 aa12.27□□□□□ -0.45
PRKDC-206ENST00000536429 MYL2P10916 166 aa12.27□□□□□ -0.45
PRKDC-206ENST00000536429 CD96P40200 585 aa12.27□□□□□ -0.45
PRKDC-206ENST00000536429 FOXA1P55317 472 aa12.27□□□□□ -0.45
PRKDC-206ENST00000536429 MLF1P58340 268 aa12.27□□□□□ -0.45
PRKDC-206ENST00000536429 TAS2R50P59544 299 aa12.27□□□□□ -0.45
PRKDC-206ENST00000536429 PMP22Q01453 160 aa12.27□□□□□ -0.45
PRKDC-206ENST00000536429 FOLH1Q04609 750 aa12.27□□□□□ -0.45
PRKDC-206ENST00000536429 GALNT1Q10472 559 aaPredicted RBP12.27□□□□□ -0.45
PRKDC-206ENST00000536429 TBL3Q12788 808 aaKnown RBP12.27□□□□□ -0.45
PRKDC-206ENST00000536429 TERF2Q15554 542 aa12.27□□□□□ -0.45
PRKDC-206ENST00000536429 ELAVL1Q15717 326 aaKnown RBP12.27□□□□□ -0.45
PRKDC-206ENST00000536429 SPINK14Q6IE38 97 aa12.27□□□□□ -0.45
PRKDC-206ENST00000536429 EMBQ6PCB8 327 aa12.27□□□□□ -0.45
PRKDC-206ENST00000536429 GPRIN3Q6ZVF9 776 aa12.27□□□□□ -0.45
PRKDC-206ENST00000536429 NUDT13Q86X67 352 aa12.27□□□□□ -0.45
PRKDC-206ENST00000536429 SLC22A9Q8IVM8 553 aa12.27□□□□□ -0.45
PRKDC-206ENST00000536429 MMP21Q8N119 569 aa12.27□□□□□ -0.45
PRKDC-206ENST00000536429 CCNYL1Q8N7R7 359 aa12.27□□□□□ -0.45
PRKDC-206ENST00000536429 MDS2Q8NDY4 140 aa12.27□□□□□ -0.45
PRKDC-206ENST00000536429 SELENOMQ8WWX9 145 aa12.27□□□□□ -0.45
PRKDC-206ENST00000536429 PPWD1Q96BP3 646 aaKnown RBP12.27□□□□□ -0.45
PRKDC-206ENST00000536429 ZBTB9Q96C00 473 aa12.27□□□□□ -0.45
PRKDC-206ENST00000536429 RPF2Q9H7B2 306 aaKnown RBP12.27□□□□□ -0.45
PRKDC-206ENST00000536429 LIN28AQ9H9Z2 209 aaKnown RBP12.27□□□□□ -0.45
PRKDC-206ENST00000536429 TEX10Q9NXF1 929 aaPredicted RBP12.27□□□□□ -0.45
PRKDC-206ENST00000536429 PHF11Q9UIL8 331 aa12.27□□□□□ -0.45
PRKDC-206ENST00000536429 SLC12A4Q9UP95 1085 aa12.27□□□□□ -0.45
PRKDC-206ENST00000536429 TIMM22Q9Y584 194 aa12.27□□□□□ -0.45
PRKDC-206ENST00000536429 SPACA6W5XKT8 324 aa12.27□□□□□ -0.45
PRKDC-206ENST00000536429 HECTD1Q9ULT8 2610 aa12.27□□□□□ -0.45
PRKDC-206ENST00000536429 C17orf105B2RV13 164 aa12.26□□□□□ -0.45
PRKDC-206ENST00000536429 HRKO00198 91 aa12.26□□□□□ -0.45
PRKDC-206ENST00000536429 PGRMC2O15173 223 aa12.26□□□□□ -0.45
PRKDC-206ENST00000536429 PRAMEF2O60811 474 aa12.26□□□□□ -0.45
PRKDC-206ENST00000536429 WISP2O76076 250 aa12.26□□□□□ -0.45
PRKDC-206ENST00000536429 CBX6O95503 412 aa12.26□□□□□ -0.45
PRKDC-206ENST00000536429 CREB1P16220 341 aa12.26□□□□□ -0.45
PRKDC-206ENST00000536429 CCT5P48643 541 aa12.26□□□□□ -0.45
PRKDC-206ENST00000536429 CLCN2P51788 898 aa12.26□□□□□ -0.45
PRKDC-206ENST00000536429 ARFIP1P53367 373 aa12.26□□□□□ -0.45
PRKDC-206ENST00000536429 NAGLUP54802 743 aa12.26□□□□□ -0.45
PRKDC-206ENST00000536429 IGLV3-21P80748 117 aaPredicted RBP12.26□□□□□ -0.45
PRKDC-206ENST00000536429 LCP2Q13094 533 aa12.26□□□□□ -0.45
PRKDC-206ENST00000536429 OR1C1Q15619 314 aa12.26□□□□□ -0.45
PRKDC-206ENST00000536429 EIF2S3LQ2VIR3 472 aaKnown RBP12.26□□□□□ -0.45
PRKDC-206ENST00000536429 RPUSD3Q6P087 351 aaKnown RBP12.26□□□□□ -0.45
PRKDC-206ENST00000536429 CYP20A1Q6UW02 462 aa12.26□□□□□ -0.45
PRKDC-206ENST00000536429 SCIMPQ6UWF3 145 aa12.26□□□□□ -0.45
PRKDC-206ENST00000536429 COMMD6Q7Z4G1 85 aa12.26□□□□□ -0.45
PRKDC-206ENST00000536429 TRABD2AQ86V40 505 aa12.26□□□□□ -0.45
PRKDC-206ENST00000536429 ZNF227Q86WZ6 799 aa12.26□□□□□ -0.45
PRKDC-206ENST00000536429 METTL4Q8N3J2 472 aa12.26□□□□□ -0.45
PRKDC-206ENST00000536429 MYRIPQ8NFW9 859 aa12.26□□□□□ -0.45
PRKDC-206ENST00000536429 AGAP11Q8TF27 550 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms