RNA–Protein interactions for RNA: ENST00000536011.5

RTN3-207, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-207ENST00000536011 TLX1P31314 330 aaPredicted RBP12.19□□□□□ -0.46
RTN3-207ENST00000536011 RFC3P40938 356 aa12.19□□□□□ -0.46
RTN3-207ENST00000536011 PIK3CBP42338 1070 aa12.19□□□□□ -0.46
RTN3-207ENST00000536011 PIK3CGP48736 1102 aa12.19□□□□□ -0.46
RTN3-207ENST00000536011 ARFIP1P53367 373 aa12.19□□□□□ -0.46
RTN3-207ENST00000536011 GPR85P60893 370 aa12.19□□□□□ -0.46
RTN3-207ENST00000536011 PLGLB1Q02325 96 aa12.19□□□□□ -0.46
RTN3-207ENST00000536011 PCDH1Q08174 1060 aa12.19□□□□□ -0.46
RTN3-207ENST00000536011 CMPK2Q5EBM0 449 aa12.19□□□□□ -0.46
RTN3-207ENST00000536011 NDUFAF5Q5TEU4 345 aa12.19□□□□□ -0.46
RTN3-207ENST00000536011 PRAMEF9Q5VWM5 478 aa12.19□□□□□ -0.46
RTN3-207ENST00000536011 KHDRBS2Q5VWX1 349 aaKnown RBP12.19□□□□□ -0.46
RTN3-207ENST00000536011 ADNP2Q6IQ32 1131 aa12.19□□□□□ -0.46
RTN3-207ENST00000536011 GRHL2Q6ISB3 625 aa12.19□□□□□ -0.46
RTN3-207ENST00000536011 OPN5Q6U736 354 aa12.19□□□□□ -0.46
RTN3-207ENST00000536011 RTL4Q6ZR62 310 aa12.19□□□□□ -0.46
RTN3-207ENST00000536011 CEP128Q6ZU80 1094 aa12.19□□□□□ -0.46
RTN3-207ENST00000536011 MDGA2Q7Z553 956 aa12.19□□□□□ -0.46
RTN3-207ENST00000536011 CMC1Q7Z7K0 106 aa12.19□□□□□ -0.46
RTN3-207ENST00000536011 ISCA2Q86U28 154 aa12.19□□□□□ -0.46
RTN3-207ENST00000536011 CD163Q86VB7 1156 aa12.19□□□□□ -0.46
RTN3-207ENST00000536011 SLC22A16Q86VW1 577 aa12.19□□□□□ -0.46
RTN3-207ENST00000536011 GOLM1Q8NBJ4 401 aa12.19□□□□□ -0.46
RTN3-207ENST00000536011 OR7G3Q8NG95 312 aa12.19□□□□□ -0.46
RTN3-207ENST00000536011 RHEBL1Q8TAI7 183 aa12.19□□□□□ -0.46
RTN3-207ENST00000536011 SLC2A12Q8TD20 617 aa12.19□□□□□ -0.46
RTN3-207ENST00000536011 FBF1Q8TES7 1133 aa12.19□□□□□ -0.46
RTN3-207ENST00000536011 PTPMT1Q8WUK0 201 aaPredicted RBP12.19□□□□□ -0.46
RTN3-207ENST00000536011 RGMAQ96B86 450 aa12.19□□□□□ -0.46
RTN3-207ENST00000536011 ART5Q96L15 291 aa12.19□□□□□ -0.46
RTN3-207ENST00000536011 SGCZQ96LD1 299 aa12.19□□□□□ -0.46
RTN3-207ENST00000536011 RASL10BQ96S79 203 aa12.19□□□□□ -0.46
RTN3-207ENST00000536011 DMRTA2Q96SC8 542 aa12.19□□□□□ -0.46
RTN3-207ENST00000536011 ATOH8Q96SQ7 321 aa12.19□□□□□ -0.46
RTN3-207ENST00000536011 TP63Q9H3D4 680 aaPredicted RBP12.19□□□□□ -0.46
RTN3-207ENST00000536011 PCDHGA11Q9Y5H2 935 aa12.19□□□□□ -0.46
RTN3-207ENST00000536011 FBN2P35556 2912 aa12.19□□□□□ -0.46
RTN3-207ENST00000536011 CSMD2Q7Z408 3487 aa12.19□□□□□ -0.46
RTN3-207ENST00000536011 A0A1B0GTH9 108 aa12.18□□□□□ -0.46
RTN3-207ENST00000536011 UBXN8O00124 270 aa12.18□□□□□ -0.46
RTN3-207ENST00000536011 WWP2O00308 870 aa12.18□□□□□ -0.46
RTN3-207ENST00000536011 OR6B1O95007 311 aa12.18□□□□□ -0.46
RTN3-207ENST00000536011 TGFB1P01137 390 aa12.18□□□□□ -0.46
RTN3-207ENST00000536011 C1QAP02745 245 aa12.18□□□□□ -0.46
RTN3-207ENST00000536011 SNRPB2P08579 225 aaKnown RBP12.18□□□□□ -0.46
RTN3-207ENST00000536011 GFAPP14136 432 aa12.18□□□□□ -0.46
RTN3-207ENST00000536011 PHBP35232 272 aa12.18□□□□□ -0.46
RTN3-207ENST00000536011 BUD31P41223 144 aaPredicted RBP12.18□□□□□ -0.46
RTN3-207ENST00000536011 SOX3P41225 446 aa12.18□□□□□ -0.46
RTN3-207ENST00000536011 HK2P52789 917 aa12.18□□□□□ -0.46
RTN3-207ENST00000536011 ETF1P62495 437 aaKnown RBP12.18□□□□□ -0.46
RTN3-207ENST00000536011 RNF4P78317 190 aa12.18□□□□□ -0.46
RTN3-207ENST00000536011 PLIN5Q00G26 463 aa12.18□□□□□ -0.46
RTN3-207ENST00000536011 CKAP4Q07065 602 aaKnown RBP12.18□□□□□ -0.46
RTN3-207ENST00000536011 TBL3Q12788 808 aaKnown RBP12.18□□□□□ -0.46
RTN3-207ENST00000536011 DEPDC1Q5TB30 811 aa12.18□□□□□ -0.46
RTN3-207ENST00000536011 OR4C11Q6IEV9 310 aa12.18□□□□□ -0.46
RTN3-207ENST00000536011 IL20RBQ6UXL0 311 aa12.18□□□□□ -0.46
RTN3-207ENST00000536011 ZNF793Q6ZN11 406 aa12.18□□□□□ -0.46
RTN3-207ENST00000536011 MYLK4Q86YV6 388 aaPredicted RBP12.18□□□□□ -0.46
RTN3-207ENST00000536011 CHERPQ8IWX8 916 aaKnown RBP12.18□□□□□ -0.46
RTN3-207ENST00000536011 OR2M7Q8NG81 312 aa12.18□□□□□ -0.46
RTN3-207ENST00000536011 ASB5Q8WWX0 329 aa12.18□□□□□ -0.46
RTN3-207ENST00000536011 TANKQ92844 425 aa12.18□□□□□ -0.46
RTN3-207ENST00000536011 SDCCAG3Q96C92 435 aa12.18□□□□□ -0.46
RTN3-207ENST00000536011 DGAT2Q96PD7 388 aa12.18□□□□□ -0.46
RTN3-207ENST00000536011 MAPKAP1Q9BPZ7 522 aa12.18□□□□□ -0.46
RTN3-207ENST00000536011 SPOCK3Q9BQ16 436 aa12.18□□□□□ -0.46
RTN3-207ENST00000536011 FAM173AQ9BQD7 235 aa12.18□□□□□ -0.46
RTN3-207ENST00000536011 PELOQ9BRX2 385 aaKnown RBP12.18□□□□□ -0.46
RTN3-207ENST00000536011 ACTR8Q9H981 624 aa12.18□□□□□ -0.46
RTN3-207ENST00000536011 IGSF5Q9NSI5 407 aa12.18□□□□□ -0.46
RTN3-207ENST00000536011 TSC22D4Q9Y3Q8 395 aa12.18□□□□□ -0.46
RTN3-207ENST00000536011 TNPO3Q9Y5L0 923 aaKnown RBP12.18□□□□□ -0.46
RTN3-207ENST00000536011 PKDREJQ9NTG1 2253 aa12.18□□□□□ -0.46
RTN3-207ENST00000536011 GTF3C1Q12789 2109 aa12.17□□□□□ -0.46
RTN3-207ENST00000536011 TMEM200CA6NKL6 621 aa12.17□□□□□ -0.46
RTN3-207ENST00000536011 RTCAO00442 366 aaKnown RBP12.17□□□□□ -0.46
RTN3-207ENST00000536011 PRKNO60260 465 aaPredicted RBP12.17□□□□□ -0.46
RTN3-207ENST00000536011 UGDHO60701 494 aa12.17□□□□□ -0.46
RTN3-207ENST00000536011 LDB3O75112 727 aa12.17□□□□□ -0.46
RTN3-207ENST00000536011 FAM155BO75949 473 aa12.17□□□□□ -0.46
RTN3-207ENST00000536011 P04436 131 aa12.17□□□□□ -0.46
RTN3-207ENST00000536011 PTX3P26022 381 aaPredicted RBP12.17□□□□□ -0.46
RTN3-207ENST00000536011 STT3AP46977 705 aa12.17□□□□□ -0.46
RTN3-207ENST00000536011 SERPINB8P50452 374 aa12.17□□□□□ -0.46
RTN3-207ENST00000536011 ALDH18A1P54886 795 aaKnown RBP12.17□□□□□ -0.46
RTN3-207ENST00000536011 PPIAP62937 165 aaKnown RBP12.17□□□□□ -0.46
RTN3-207ENST00000536011 SLAMF1Q13291 335 aa12.17□□□□□ -0.46
RTN3-207ENST00000536011 DDX39BQ13838 428 aaKnown RBP12.17□□□□□ -0.46
RTN3-207ENST00000536011 SETDB1Q15047 1291 aa12.17□□□□□ -0.46
RTN3-207ENST00000536011 MPEG1Q2M385 716 aa12.17□□□□□ -0.46
RTN3-207ENST00000536011 LIPJQ5W064 366 aa12.17□□□□□ -0.46
RTN3-207ENST00000536011 C8orf74Q6P047 294 aa12.17□□□□□ -0.46
RTN3-207ENST00000536011 METTL2BQ6P1Q9 378 aaKnown RBP12.17□□□□□ -0.46
RTN3-207ENST00000536011 C3P1Q6ZMU1 363 aa12.17□□□□□ -0.46
RTN3-207ENST00000536011 FGD2Q7Z6J4 655 aa12.17□□□□□ -0.46
RTN3-207ENST00000536011 UBE3DQ7Z6J8 389 aa12.17□□□□□ -0.46
RTN3-207ENST00000536011 GPR180Q86V85 440 aa12.17□□□□□ -0.46
RTN3-207ENST00000536011 DND1Q8IYX4 353 aaKnown RBP12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms