RNA–Protein interactions for RNA: ENST00000535977.5

RAB40C-203, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RAB40C, Length 2,717 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-203ENST00000535977 MAD2L1BPQ15013 274 aaPredicted RBP17.15■□□□□ 0.34
RAB40C-203ENST00000535977 LIPIQ6XZB0 460 aa17.15■□□□□ 0.34
RAB40C-203ENST00000535977 SLC46A3Q7Z3Q1 461 aa17.15■□□□□ 0.34
RAB40C-203ENST00000535977 UBE2Q1Q7Z7E8 422 aa17.15■□□□□ 0.34
RAB40C-203ENST00000535977 OR7G3Q8NG95 312 aa17.15■□□□□ 0.34
RAB40C-203ENST00000535977 WFIKKN2Q8TEU8 576 aa17.15■□□□□ 0.34
RAB40C-203ENST00000535977 AP2M1Q96CW1 435 aa17.15■□□□□ 0.34
RAB40C-203ENST00000535977 TCEAL4Q96EI5 215 aa17.15■□□□□ 0.34
RAB40C-203ENST00000535977 OR4K3Q96R72 315 aa17.15■□□□□ 0.34
RAB40C-203ENST00000535977 ZCCHC2Q9C0B9 1178 aaKnown RBP17.15■□□□□ 0.34
RAB40C-203ENST00000535977 VNN3Q9NY84 501 aa17.15■□□□□ 0.34
RAB40C-203ENST00000535977 PCDH10Q9P2E7 1040 aa17.15■□□□□ 0.34
RAB40C-203ENST00000535977 SNX8Q9Y5X2 465 aa17.15■□□□□ 0.34
RAB40C-203ENST00000535977 MYOFQ9NZM1 2061 aa17.15■□□□□ 0.34
RAB40C-203ENST00000535977 FOXE1O00358 373 aaPredicted RBP17.14■□□□□ 0.33
RAB40C-203ENST00000535977 MOSPD3O75425 235 aa17.14■□□□□ 0.33
RAB40C-203ENST00000535977 IMPA1P29218 277 aa17.14■□□□□ 0.33
RAB40C-203ENST00000535977 MMP12P39900 470 aa17.14■□□□□ 0.33
RAB40C-203ENST00000535977 GZMKP49863 264 aa17.14■□□□□ 0.33
RAB40C-203ENST00000535977 ELOAQ14241 798 aaKnown RBP17.14■□□□□ 0.33
RAB40C-203ENST00000535977 TAB1Q15750 504 aa17.14■□□□□ 0.33
RAB40C-203ENST00000535977 ZMAT1Q5H9K5 638 aa17.14■□□□□ 0.33
RAB40C-203ENST00000535977 NLRP8Q86W28 1048 aa17.14■□□□□ 0.33
RAB40C-203ENST00000535977 LIX1LQ8IVB5 337 aa17.14■□□□□ 0.33
RAB40C-203ENST00000535977 C1orf52Q8N6N3 182 aaKnown RBP17.14■□□□□ 0.33
RAB40C-203ENST00000535977 HSH2DQ96JZ2 352 aa17.14■□□□□ 0.33
RAB40C-203ENST00000535977 EPYCQ99645 322 aa17.14■□□□□ 0.33
RAB40C-203ENST00000535977 CHCHD6Q9BRQ6 235 aa17.14■□□□□ 0.33
RAB40C-203ENST00000535977 HDHD5Q9BXW7 423 aa17.14■□□□□ 0.33
RAB40C-203ENST00000535977 BHLHE41Q9C0J9 482 aaPredicted RBP17.14■□□□□ 0.33
RAB40C-203ENST00000535977 FZD4Q9ULV1 537 aa17.14■□□□□ 0.33
RAB40C-203ENST00000535977 A0A0B4J293 547 aa17.14■□□□□ 0.33
RAB40C-203ENST00000535977 A8MUA0 341 aa17.14■□□□□ 0.33
RAB40C-203ENST00000535977 SLC16A8O95907 504 aa17.14■□□□□ 0.33
RAB40C-203ENST00000535977 BAK1Q16611 211 aa17.14■□□□□ 0.33
RAB40C-203ENST00000535977 TMEM220Q6QAJ8 160 aa17.14■□□□□ 0.33
RAB40C-203ENST00000535977 NPAS3Q8IXF0 933 aa17.14■□□□□ 0.33
RAB40C-203ENST00000535977 RNF175Q8N4F7 328 aa17.14■□□□□ 0.33
RAB40C-203ENST00000535977 RNF31Q96EP0 1072 aa17.14■□□□□ 0.33
RAB40C-203ENST00000535977 WDR34Q96EX3 536 aa17.14■□□□□ 0.33
RAB40C-203ENST00000535977 KCNN2Q9H2S1 579 aa17.14■□□□□ 0.33
RAB40C-203ENST00000535977 PDP1Q9P0J1 537 aaPredicted RBP17.14■□□□□ 0.33
RAB40C-203ENST00000535977 ZMAT5Q9UDW3 170 aaKnown RBP17.14■□□□□ 0.33
RAB40C-203ENST00000535977 ATP6V1HQ9UI12 483 aa17.14■□□□□ 0.33
RAB40C-203ENST00000535977 SAMHD1Q9Y3Z3 626 aaKnown RBP17.14■□□□□ 0.33
RAB40C-203ENST00000535977 TMEM202A6NGA9 273 aa17.13■□□□□ 0.33
RAB40C-203ENST00000535977 NPC1O15118 1278 aa17.13■□□□□ 0.33
RAB40C-203ENST00000535977 OR2B3O76000 313 aa17.13■□□□□ 0.33
RAB40C-203ENST00000535977 RHOP08100 348 aa17.13■□□□□ 0.33
RAB40C-203ENST00000535977 CCNYL3P0C7X3 344 aa17.13■□□□□ 0.33
RAB40C-203ENST00000535977 EFNA1P20827 205 aaPredicted RBP17.13■□□□□ 0.33
RAB40C-203ENST00000535977 C21orf33P30042 268 aaPredicted RBP17.13■□□□□ 0.33
RAB40C-203ENST00000535977 WEE1P30291 646 aa17.13■□□□□ 0.33
RAB40C-203ENST00000535977 TIA1P31483 386 aaKnown RBP eCLIP17.13■□□□□ 0.33
RAB40C-203ENST00000535977 TNFSF8P32971 234 aa17.13■□□□□ 0.33
RAB40C-203ENST00000535977 PCGF2P35227 344 aa17.13■□□□□ 0.33
RAB40C-203ENST00000535977 MLLT3P42568 568 aaPredicted RBP17.13■□□□□ 0.33
RAB40C-203ENST00000535977 CTSCP53634 463 aa17.13■□□□□ 0.33
RAB40C-203ENST00000535977 RAE1P78406 368 aaKnown RBP17.13■□□□□ 0.33
RAB40C-203ENST00000535977 SLCO4C1Q6ZQN7 724 aa17.13■□□□□ 0.33
RAB40C-203ENST00000535977 CLECL1Q8IZS7 167 aa17.13■□□□□ 0.33
RAB40C-203ENST00000535977 CYP4Z2PQ8N1L4 340 aa17.13■□□□□ 0.33
RAB40C-203ENST00000535977 TTC29Q8NA56 475 aaPredicted RBP17.13■□□□□ 0.33
RAB40C-203ENST00000535977 HUS1BQ8NHY5 278 aa17.13■□□□□ 0.33
RAB40C-203ENST00000535977 TOE1Q96GM8 510 aaKnown RBP17.13■□□□□ 0.33
RAB40C-203ENST00000535977 TCF25Q9BQ70 676 aa17.13■□□□□ 0.33
RAB40C-203ENST00000535977 EFCAB11Q9BUY7 163 aa17.13■□□□□ 0.33
RAB40C-203ENST00000535977 CHST8Q9H2A9 424 aa17.13■□□□□ 0.33
RAB40C-203ENST00000535977 KIF17Q9P2E2 1029 aa17.13■□□□□ 0.33
RAB40C-203ENST00000535977 NDRG4Q9ULP0 352 aaKnown RBP17.13■□□□□ 0.33
RAB40C-203ENST00000535977 C1orf226A1L170 272 aa17.13■□□□□ 0.33
RAB40C-203ENST00000535977 PCP4L1A6NKN8 68 aa17.13■□□□□ 0.33
RAB40C-203ENST00000535977 H3BM21 787 aa17.13■□□□□ 0.33
RAB40C-203ENST00000535977 SUV39H1O43463 412 aa17.13■□□□□ 0.33
RAB40C-203ENST00000535977 C9P02748 559 aa17.13■□□□□ 0.33
RAB40C-203ENST00000535977 CTSLP07711 333 aa17.13■□□□□ 0.33
RAB40C-203ENST00000535977 ADORA3P0DMS8 318 aa17.13■□□□□ 0.33
RAB40C-203ENST00000535977 IDSP22304 550 aa17.13■□□□□ 0.33
RAB40C-203ENST00000535977 AZGP1P25311 298 aaKnown RBP17.13■□□□□ 0.33
RAB40C-203ENST00000535977 EPHA2P29317 976 aa17.13■□□□□ 0.33
RAB40C-203ENST00000535977 HOXA9P31269 272 aa17.13■□□□□ 0.33
RAB40C-203ENST00000535977 TNK1Q13470 666 aa17.13■□□□□ 0.33
RAB40C-203ENST00000535977 RGNQ15493 299 aa17.13■□□□□ 0.33
RAB40C-203ENST00000535977 PAMR1Q6UXH9 720 aa17.13■□□□□ 0.33
RAB40C-203ENST00000535977 CREB3L2Q70SY1 520 aa17.13■□□□□ 0.33
RAB40C-203ENST00000535977 CEP68Q76N32 757 aa17.13■□□□□ 0.33
RAB40C-203ENST00000535977 TCTE3Q8IZS6 198 aa17.13■□□□□ 0.33
RAB40C-203ENST00000535977 C11orf65Q8NCR3 313 aa17.13■□□□□ 0.33
RAB40C-203ENST00000535977 GOT1L1Q8NHS2 421 aaPredicted RBP17.13■□□□□ 0.33
RAB40C-203ENST00000535977 CYB5D2Q8WUJ1 264 aa17.13■□□□□ 0.33
RAB40C-203ENST00000535977 IPCEF1Q8WWN9 437 aaPredicted RBP17.13■□□□□ 0.33
RAB40C-203ENST00000535977 MYOCQ99972 504 aa17.13■□□□□ 0.33
RAB40C-203ENST00000535977 B3GNT2Q9NY97 397 aa17.13■□□□□ 0.33
RAB40C-203ENST00000535977 PCDHGB3Q9Y5G1 929 aa17.13■□□□□ 0.33
RAB40C-203ENST00000535977 TLL1O43897 1013 aa17.12■□□□□ 0.33
RAB40C-203ENST00000535977 PTX3P26022 381 aaPredicted RBP17.12■□□□□ 0.33
RAB40C-203ENST00000535977 HTRA4P83105 476 aaPredicted RBP17.12■□□□□ 0.33
RAB40C-203ENST00000535977 VLDLRP98155 873 aa17.12■□□□□ 0.33
RAB40C-203ENST00000535977 ZNF648Q5T619 568 aaPredicted RBP17.12■□□□□ 0.33
RAB40C-203ENST00000535977 HIST2H2AA3Q6FI13 130 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms