RNA–Protein interactions for RNA: ENST00000534551.2

VPS11-205, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS11, Length 585 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-205ENST00000534551 CLK4Q9HAZ1 481 aaKnown RBP13.14□□□□□ -0.31
VPS11-205ENST00000534551 RIC8BQ9NVN3 520 aa13.14□□□□□ -0.31
VPS11-205ENST00000534551 PSD3Q9NYI0 1048 aa13.14□□□□□ -0.31
VPS11-205ENST00000534551 VPS29Q9UBQ0 182 aa13.14□□□□□ -0.31
VPS11-205ENST00000534551 PHF11Q9UIL8 331 aa13.14□□□□□ -0.31
VPS11-205ENST00000534551 MMACHCQ9Y4U1 282 aa13.14□□□□□ -0.31
VPS11-205ENST00000534551 POLR3HQ9Y535 204 aaPredicted RBP13.14□□□□□ -0.31
VPS11-205ENST00000534551 DNAJC15Q9Y5T4 150 aa13.14□□□□□ -0.31
VPS11-205ENST00000534551 MKRN2OSH3BPM6 223 aa13.13□□□□□ -0.31
VPS11-205ENST00000534551 PIP5K1BO14986 540 aa13.13□□□□□ -0.31
VPS11-205ENST00000534551 BIRC5O15392 142 aa13.13□□□□□ -0.31
VPS11-205ENST00000534551 PCDH7O60245 1069 aa13.13□□□□□ -0.31
VPS11-205ENST00000534551 MYO1DO94832 1006 aa13.13□□□□□ -0.31
VPS11-205ENST00000534551 HSPA4LO95757 839 aa13.13□□□□□ -0.31
VPS11-205ENST00000534551 LINC00032P0C843 101 aa13.13□□□□□ -0.31
VPS11-205ENST00000534551 TIA1P31483 386 aaKnown RBP eCLIP13.13□□□□□ -0.31
VPS11-205ENST00000534551 PTGER1P34995 402 aa13.13□□□□□ -0.31
VPS11-205ENST00000534551 TSFMP43897 325 aaKnown RBP13.13□□□□□ -0.31
VPS11-205ENST00000534551 CD97P48960 835 aa13.13□□□□□ -0.31
VPS11-205ENST00000534551 MAPK12P53778 367 aa13.13□□□□□ -0.31
VPS11-205ENST00000534551 NAA20P61599 178 aa13.13□□□□□ -0.31
VPS11-205ENST00000534551 FOLH1Q04609 750 aa13.13□□□□□ -0.31
VPS11-205ENST00000534551 BST1Q10588 318 aa13.13□□□□□ -0.31
VPS11-205ENST00000534551 IMPG1Q17R60 797 aa13.13□□□□□ -0.31
VPS11-205ENST00000534551 BTBD16Q32M84 506 aa13.13□□□□□ -0.31
VPS11-205ENST00000534551 UGT3A2Q3SY77 523 aa13.13□□□□□ -0.31
VPS11-205ENST00000534551 LACTB2Q53H82 288 aaPredicted RBP13.13□□□□□ -0.31
VPS11-205ENST00000534551 SPDYAQ5MJ70 313 aa13.13□□□□□ -0.31
VPS11-205ENST00000534551 CCNYL2Q5T2Q4 361 aa13.13□□□□□ -0.31
VPS11-205ENST00000534551 FCRLBQ6BAA4 426 aa13.13□□□□□ -0.31
VPS11-205ENST00000534551 FAM180BQ6P0A1 224 aa13.13□□□□□ -0.31
VPS11-205ENST00000534551 DGAT2L6Q6ZPD8 337 aa13.13□□□□□ -0.31
VPS11-205ENST00000534551 PTRH1Q86Y79 214 aaKnown RBP13.13□□□□□ -0.31
VPS11-205ENST00000534551 ZNF595Q8IYB9 648 aa13.13□□□□□ -0.31
VPS11-205ENST00000534551 CDC26Q8NHZ8 85 aa13.13□□□□□ -0.31
VPS11-205ENST00000534551 CHTF18Q8WVB6 975 aa13.13□□□□□ -0.31
VPS11-205ENST00000534551 PPP1R36Q96LQ0 422 aa13.13□□□□□ -0.31
VPS11-205ENST00000534551 IMMP1LQ96LU5 166 aa13.13□□□□□ -0.31
VPS11-205ENST00000534551 SORT1Q99523 831 aa13.13□□□□□ -0.31
VPS11-205ENST00000534551 VIPAS39Q9H9C1 493 aa13.13□□□□□ -0.31
VPS11-205ENST00000534551 ATP13A2Q9NQ11 1180 aa13.13□□□□□ -0.31
VPS11-205ENST00000534551 PNO1Q9NRX1 252 aaKnown RBP13.13□□□□□ -0.31
VPS11-205ENST00000534551 LYARQ9NX58 379 aaKnown RBP13.13□□□□□ -0.31
VPS11-205ENST00000534551 C19orf25Q9UFG5 118 aaPredicted RBP13.13□□□□□ -0.31
VPS11-205ENST00000534551 CCL27Q9Y4X3 112 aa13.13□□□□□ -0.31
VPS11-205ENST00000534551 CSAG2Q9Y5P2 127 aa13.13□□□□□ -0.31
VPS11-205ENST00000534551 SAGE2PA6NJ88 616 aa13.12□□□□□ -0.31
VPS11-205ENST00000534551 PGRMC2O15173 223 aa13.12□□□□□ -0.31
VPS11-205ENST00000534551 PROM1O43490 865 aa13.12□□□□□ -0.31
VPS11-205ENST00000534551 MAN1A2O60476 641 aa13.12□□□□□ -0.31
VPS11-205ENST00000534551 CYC1P08574 325 aa13.12□□□□□ -0.31
VPS11-205ENST00000534551 PRR35P0CG20 571 aa13.12□□□□□ -0.31
VPS11-205ENST00000534551 NEFHP12036 1026 aa13.12□□□□□ -0.31
VPS11-205ENST00000534551 PGDP52209 483 aa13.12□□□□□ -0.31
VPS11-205ENST00000534551 ARFIP1P53367 373 aa13.12□□□□□ -0.31
VPS11-205ENST00000534551 SLC26A5P58743 744 aa13.12□□□□□ -0.31
VPS11-205ENST00000534551 ABCE1P61221 599 aaKnown RBP13.12□□□□□ -0.31
VPS11-205ENST00000534551 DUSP2Q05923 314 aa13.12□□□□□ -0.31
VPS11-205ENST00000534551 ACTN3Q08043 901 aaPredicted RBP13.12□□□□□ -0.31
VPS11-205ENST00000534551 ACSM2AQ08AH3 577 aa13.12□□□□□ -0.31
VPS11-205ENST00000534551 NFATC3Q12968 1075 aa13.12□□□□□ -0.31
VPS11-205ENST00000534551 MYBPC3Q14896 1274 aa13.12□□□□□ -0.31
VPS11-205ENST00000534551 NR6A1Q15406 480 aa13.12□□□□□ -0.31
VPS11-205ENST00000534551 ZNF750Q32MQ0 723 aa13.12□□□□□ -0.31
VPS11-205ENST00000534551 ACSM2BQ68CK6 577 aa13.12□□□□□ -0.31
VPS11-205ENST00000534551 TRIM46Q7Z4K8 759 aa13.12□□□□□ -0.31
VPS11-205ENST00000534551 DDIASQ8IXT1 998 aa13.12□□□□□ -0.31
VPS11-205ENST00000534551 ZNF321PQ8N8H1 164 aa13.12□□□□□ -0.31
VPS11-205ENST00000534551 PSMF1Q92530 271 aa13.12□□□□□ -0.31
VPS11-205ENST00000534551 NACC2Q96BF6 587 aa13.12□□□□□ -0.31
VPS11-205ENST00000534551 C3orf30Q96M34 536 aa13.12□□□□□ -0.31
VPS11-205ENST00000534551 LPAR4Q99677 370 aa13.12□□□□□ -0.31
VPS11-205ENST00000534551 ADNPQ9H2P0 1102 aa13.12□□□□□ -0.31
VPS11-205ENST00000534551 ZNF552Q9H707 407 aaPredicted RBP13.12□□□□□ -0.31
VPS11-205ENST00000534551 RPF2Q9H7B2 306 aaKnown RBP13.12□□□□□ -0.31
VPS11-205ENST00000534551 AHSPQ9NZD4 102 aa13.12□□□□□ -0.31
VPS11-205ENST00000534551 LUZP4Q9P127 313 aa13.12□□□□□ -0.31
VPS11-205ENST00000534551 PTGFRNQ9P2B2 879 aa13.12□□□□□ -0.31
VPS11-205ENST00000534551 HEY2Q9UBP5 337 aa13.12□□□□□ -0.31
VPS11-205ENST00000534551 ZNF223Q9UK11 482 aaPredicted RBP13.12□□□□□ -0.31
VPS11-205ENST00000534551 MRPS33Q9Y291 106 aaKnown RBP13.12□□□□□ -0.31
VPS11-205ENST00000534551 TRAF6Q9Y4K3 522 aa13.12□□□□□ -0.31
VPS11-205ENST00000534551 SPACA6W5XKT8 324 aa13.12□□□□□ -0.31
VPS11-205ENST00000534551 CNTRLQ7Z7A1 2325 aa13.11□□□□□ -0.31
VPS11-205ENST00000534551 EXPH5Q8NEV8 1989 aa13.11□□□□□ -0.31
VPS11-205ENST00000534551 ATP6AP2A0A1C7CYW4 349 aa13.11□□□□□ -0.31
VPS11-205ENST00000534551 TMEM114B3SHH9 223 aa13.11□□□□□ -0.31
VPS11-205ENST00000534551 H3BQF6 201 aa13.11□□□□□ -0.31
VPS11-205ENST00000534551 HRKO00198 91 aa13.11□□□□□ -0.31
VPS11-205ENST00000534551 CLDN4O14493 209 aa13.11□□□□□ -0.31
VPS11-205ENST00000534551 ATP6AP2O75787 350 aa13.11□□□□□ -0.31
VPS11-205ENST00000534551 RSL1D1O76021 490 aaKnown RBP13.11□□□□□ -0.31
VPS11-205ENST00000534551 F10P00742 488 aa13.11□□□□□ -0.31
VPS11-205ENST00000534551 IL3P08700 152 aa13.11□□□□□ -0.31
VPS11-205ENST00000534551 BUD31P41223 144 aaPredicted RBP13.11□□□□□ -0.31
VPS11-205ENST00000534551 SLC1A6P48664 564 aa13.11□□□□□ -0.31
VPS11-205ENST00000534551 ALDH9A1P49189 494 aa13.11□□□□□ -0.31
VPS11-205ENST00000534551 HSD17B7P56937 341 aa13.11□□□□□ -0.31
VPS11-205ENST00000534551 RPL38P63173 70 aaKnown RBP13.11□□□□□ -0.31
VPS11-205ENST00000534551 PDCD2Q16342 344 aaPredicted RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms