RNA–Protein interactions for RNA: ENST00000534440.5

RPS3-219, Transcript of ribosomal protein S3, humanhuman

TSL 2 BASIC

Gene RPS3, Length 564 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS3-219ENST00000534440 MTERF3Q96E29 417 aa9.5□□□□□ -0.89
RPS3-219ENST00000534440 ZNF764Q96H86 408 aaPredicted RBP9.5□□□□□ -0.89
RPS3-219ENST00000534440 CCDC74BQ96LY2 380 aa9.5□□□□□ -0.89
RPS3-219ENST00000534440 CCDC115Q96NT0 180 aa9.5□□□□□ -0.89
RPS3-219ENST00000534440 RAB3IPQ96QF0 476 aaPredicted RBP9.5□□□□□ -0.89
RPS3-219ENST00000534440 SERINC2Q96SA4 455 aa9.5□□□□□ -0.89
RPS3-219ENST00000534440 CDRT15Q96T59 188 aa9.5□□□□□ -0.89
RPS3-219ENST00000534440 CGREF1Q99674 301 aa9.5□□□□□ -0.89
RPS3-219ENST00000534440 CPPED1Q9BRF8 314 aaPredicted RBP9.5□□□□□ -0.89
RPS3-219ENST00000534440 BHLHE41Q9C0J9 482 aaPredicted RBP9.5□□□□□ -0.89
RPS3-219ENST00000534440 MMADHCQ9H3L0 296 aaPredicted RBP9.5□□□□□ -0.89
RPS3-219ENST00000534440 SPAG4Q9NPE6 437 aa9.5□□□□□ -0.89
RPS3-219ENST00000534440 FAM120CQ9NX05 1096 aaKnown RBP9.5□□□□□ -0.89
RPS3-219ENST00000534440 NDE1Q9NXR1 346 aa9.5□□□□□ -0.89
RPS3-219ENST00000534440 KCMF1Q9P0J7 381 aa9.5□□□□□ -0.89
RPS3-219ENST00000534440 SH3BP4Q9P0V3 963 aa9.5□□□□□ -0.89
RPS3-219ENST00000534440 PDP2Q9P2J9 529 aa9.5□□□□□ -0.89
RPS3-219ENST00000534440 PRPF19Q9UMS4 504 aaKnown RBP9.5□□□□□ -0.89
RPS3-219ENST00000534440 USP22Q9UPT9 525 aa9.5□□□□□ -0.89
RPS3-219ENST00000534440 NAALAD2Q9Y3Q0 740 aa9.5□□□□□ -0.89
RPS3-219ENST00000534440 SLC22A7Q9Y694 548 aa9.5□□□□□ -0.89
RPS3-219ENST00000534440 CROCCQ5TZA2 2017 aa9.49□□□□□ -0.89
RPS3-219ENST00000534440 A0A096LPI6 279 aa9.49□□□□□ -0.89
RPS3-219ENST00000534440 TMEM150CB9EJG8 249 aa9.49□□□□□ -0.89
RPS3-219ENST00000534440 D6RAR5 112 aa9.49□□□□□ -0.89
RPS3-219ENST00000534440 SGK494L7N484 410 aa9.49□□□□□ -0.89
RPS3-219ENST00000534440 AGRPO00253 132 aa9.49□□□□□ -0.89
RPS3-219ENST00000534440 RNASET2O00584 256 aaKnown RBP9.49□□□□□ -0.89
RPS3-219ENST00000534440 NTN3O00634 580 aaPredicted RBP9.49□□□□□ -0.89
RPS3-219ENST00000534440 PROM1O43490 865 aa9.49□□□□□ -0.89
RPS3-219ENST00000534440 SRPX2O60687 465 aaPredicted RBP9.49□□□□□ -0.89
RPS3-219ENST00000534440 CBFA2T3O75081 653 aa9.49□□□□□ -0.89
RPS3-219ENST00000534440 RDH16O75452 317 aa9.49□□□□□ -0.89
RPS3-219ENST00000534440 KCNH1O95259 989 aa9.49□□□□□ -0.89
RPS3-219ENST00000534440 LDOC1O95751 146 aaPredicted RBP9.49□□□□□ -0.89
RPS3-219ENST00000534440 C6orf47O95873 294 aa9.49□□□□□ -0.89
RPS3-219ENST00000534440 NR2F6P10588 404 aa9.49□□□□□ -0.89
RPS3-219ENST00000534440 CKMT2P17540 419 aa9.49□□□□□ -0.89
RPS3-219ENST00000534440 ACP1P24666 158 aa9.49□□□□□ -0.89
RPS3-219ENST00000534440 MSX2P35548 267 aaPredicted RBP9.49□□□□□ -0.89
RPS3-219ENST00000534440 RPL3P39023 403 aaKnown RBP9.49□□□□□ -0.89
RPS3-219ENST00000534440 GSTM5P46439 218 aa9.49□□□□□ -0.89
RPS3-219ENST00000534440 HNRNPFP52597 415 aaKnown RBP9.49□□□□□ -0.89
RPS3-219ENST00000534440 LIM2P55344 173 aa9.49□□□□□ -0.89
RPS3-219ENST00000534440 TNFRSF17Q02223 184 aa9.49□□□□□ -0.89
RPS3-219ENST00000534440 HEPACAMQ14CZ8 416 aa9.49□□□□□ -0.89
RPS3-219ENST00000534440 ZNF750Q32MQ0 723 aa9.49□□□□□ -0.89
RPS3-219ENST00000534440 MANEAQ5SRI9 462 aa9.49□□□□□ -0.89
RPS3-219ENST00000534440 PRAMEF17Q5VTA0 474 aa9.49□□□□□ -0.89
RPS3-219ENST00000534440 NANOGP8Q6NSW7 305 aa9.49□□□□□ -0.89
RPS3-219ENST00000534440 ZNF551Q7Z340 670 aaPredicted RBP9.49□□□□□ -0.89
RPS3-219ENST00000534440 ARHGAP22Q7Z5H3 698 aa9.49□□□□□ -0.89
RPS3-219ENST00000534440 R3HCC1LQ7Z5L2 792 aaKnown RBP9.49□□□□□ -0.89
RPS3-219ENST00000534440 KMT5CQ86Y97 462 aa9.49□□□□□ -0.89
RPS3-219ENST00000534440 NAXDQ8IW45 347 aa9.49□□□□□ -0.89
RPS3-219ENST00000534440 SLITRK4Q8IW52 837 aa9.49□□□□□ -0.89
RPS3-219ENST00000534440 CLEC4FQ8N1N0 589 aa9.49□□□□□ -0.89
RPS3-219ENST00000534440 CA13Q8N1Q1 262 aa9.49□□□□□ -0.89
RPS3-219ENST00000534440 METTL27Q8N6F8 245 aaPredicted RBP9.49□□□□□ -0.89
RPS3-219ENST00000534440 ZNF655Q8N720 491 aaPredicted RBP9.49□□□□□ -0.89
RPS3-219ENST00000534440 TMEM52Q8NDY8 209 aa9.49□□□□□ -0.89
RPS3-219ENST00000534440 OR9A4Q8NGU2 314 aa9.49□□□□□ -0.89
RPS3-219ENST00000534440 EXOSC8Q96B26 276 aaKnown RBP9.49□□□□□ -0.89
RPS3-219ENST00000534440 RNF31Q96EP0 1072 aa9.49□□□□□ -0.89
RPS3-219ENST00000534440 ITCHQ96J02 903 aa9.49□□□□□ -0.89
RPS3-219ENST00000534440 DENND2DQ9H6A0 471 aaPredicted RBP9.49□□□□□ -0.89
RPS3-219ENST00000534440 NANOGQ9H9S0 305 aa9.49□□□□□ -0.89
RPS3-219ENST00000534440 MIEF1Q9NQG6 463 aa9.49□□□□□ -0.89
RPS3-219ENST00000534440 ENAMQ9NRM1 1142 aa9.49□□□□□ -0.89
RPS3-219ENST00000534440 GID8Q9NWU2 228 aa9.49□□□□□ -0.89
RPS3-219ENST00000534440 LYARQ9NX58 379 aaKnown RBP9.49□□□□□ -0.89
RPS3-219ENST00000534440 SIDT1Q9NXL6 827 aaKnown RBP9.49□□□□□ -0.89
RPS3-219ENST00000534440 ADA2Q9NZK5 511 aa9.49□□□□□ -0.89
RPS3-219ENST00000534440 FTSJ1Q9UET6 329 aa9.49□□□□□ -0.89
RPS3-219ENST00000534440 CD300AQ9UGN4 299 aa9.49□□□□□ -0.89
RPS3-219ENST00000534440 BTNL2Q9UIR0 455 aa9.49□□□□□ -0.89
RPS3-219ENST00000534440 CES1P1Q9UKY3 287 aa9.49□□□□□ -0.89
RPS3-219ENST00000534440 MAPRE3Q9UPY8 281 aa9.49□□□□□ -0.89
RPS3-219ENST00000534440 WBP11Q9Y2W2 641 aaKnown RBP9.49□□□□□ -0.89
RPS3-219ENST00000534440 MSRB2Q9Y3D2 182 aa9.49□□□□□ -0.89
RPS3-219ENST00000534440 TMEM184BQ9Y519 407 aaPredicted RBP9.49□□□□□ -0.89
RPS3-219ENST00000534440 PCDHB14Q9Y5E9 798 aa9.49□□□□□ -0.89
RPS3-219ENST00000534440 ASCC3Q8N3C0 2202 aaKnown RBP9.49□□□□□ -0.89
RPS3-219ENST00000534440 SPTBP11277 2137 aa9.49□□□□□ -0.89
RPS3-219ENST00000534440 A0A0A6YYC8 382 aaPredicted RBP9.48□□□□□ -0.89
RPS3-219ENST00000534440 PRSS51A0A1B0GVH4 220 aa9.48□□□□□ -0.89
RPS3-219ENST00000534440 SPAARA0A1B0GVQ0 90 aa9.48□□□□□ -0.89
RPS3-219ENST00000534440 C1orf226A1L170 272 aa9.48□□□□□ -0.89
RPS3-219ENST00000534440 HYKKA2RU49 373 aa9.48□□□□□ -0.89
RPS3-219ENST00000534440 URADA6NGE7 173 aa9.48□□□□□ -0.89
RPS3-219ENST00000534440 I3L1I5 382 aaPredicted RBP9.48□□□□□ -0.89
RPS3-219ENST00000534440 RFXANKO14593 260 aa9.48□□□□□ -0.89
RPS3-219ENST00000534440 TOX3O15405 576 aaPredicted RBP9.48□□□□□ -0.89
RPS3-219ENST00000534440 PDPK1O15530 556 aa9.48□□□□□ -0.89
RPS3-219ENST00000534440 B3GALT2O43825 422 aa9.48□□□□□ -0.89
RPS3-219ENST00000534440 MSL3P1P0C860 447 aa9.48□□□□□ -0.89
RPS3-219ENST00000534440 PTGER1P34995 402 aa9.48□□□□□ -0.89
RPS3-219ENST00000534440 FRKP42685 505 aaPredicted RBP9.48□□□□□ -0.89
RPS3-219ENST00000534440 ARL4DP49703 201 aa9.48□□□□□ -0.89
RPS3-219ENST00000534440 ERFP50548 548 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms