RNA–Protein interactions for RNA: ENST00000534374.1

YIF1A-213, Transcript of Yip1 interacting factor homolog A, membrane trafficking protein, humanhuman

TSL 2

Gene YIF1A, Length 540 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1A-213ENST00000534374 SUCOQ9UBS9 1254 aaKnown RBP21.67■■□□□ 1.06
YIF1A-213ENST00000534374 NPIPA1Q9UND3 350 aa21.67■■□□□ 1.06
YIF1A-213ENST00000534374 ZNF835Q9Y2P0 537 aa21.67■■□□□ 1.06
YIF1A-213ENST00000534374 CROCCQ5TZA2 2017 aa21.67■■□□□ 1.06
YIF1A-213ENST00000534374 CRYBG3Q68DQ2 2970 aa21.66■■□□□ 1.06
YIF1A-213ENST00000534374 LRRC14BA6NHZ5 514 aa21.66■■□□□ 1.06
YIF1A-213ENST00000534374 TMEM200CA6NKL6 621 aa21.66■■□□□ 1.06
YIF1A-213ENST00000534374 FOXE1O00358 373 aaPredicted RBP21.66■■□□□ 1.06
YIF1A-213ENST00000534374 SAP18O00422 153 aaKnown RBP21.66■■□□□ 1.06
YIF1A-213ENST00000534374 ASNA1O43681 348 aa21.66■■□□□ 1.06
YIF1A-213ENST00000534374 SLC19A2O60779 497 aa21.66■■□□□ 1.06
YIF1A-213ENST00000534374 LDB3O75112 727 aa21.66■■□□□ 1.06
YIF1A-213ENST00000534374 SIX3O95343 332 aaPredicted RBP21.66■■□□□ 1.06
YIF1A-213ENST00000534374 TNNI3P19429 210 aa21.66■■□□□ 1.06
YIF1A-213ENST00000534374 TLX1P31314 330 aaPredicted RBP21.66■■□□□ 1.06
YIF1A-213ENST00000534374 SSR4P51571 173 aa21.66■■□□□ 1.06
YIF1A-213ENST00000534374 RAP1GDS1P52306 607 aa21.66■■□□□ 1.06
YIF1A-213ENST00000534374 IGLV3-21P80748 117 aaPredicted RBP21.66■■□□□ 1.06
YIF1A-213ENST00000534374 CUL3Q13618 768 aa21.66■■□□□ 1.06
YIF1A-213ENST00000534374 DDX39BQ13838 428 aaKnown RBP21.66■■□□□ 1.06
YIF1A-213ENST00000534374 CPSF6Q16630 551 aaKnown RBP eCLIP21.66■■□□□ 1.06
YIF1A-213ENST00000534374 Q6ZPB1 254 aaPredicted RBP21.66■■□□□ 1.06
YIF1A-213ENST00000534374 GPR180Q86V85 440 aa21.66■■□□□ 1.06
YIF1A-213ENST00000534374 TANKQ92844 425 aa21.66■■□□□ 1.06
YIF1A-213ENST00000534374 ZNF358Q9NW07 568 aa21.66■■□□□ 1.06
YIF1A-213ENST00000534374 PPT2Q9UMR5 302 aa21.66■■□□□ 1.06
YIF1A-213ENST00000534374 CREBBPQ92793 2442 aa21.65■■□□□ 1.06
YIF1A-213ENST00000534374 A0A087WUV0 522 aaPredicted RBP21.65■■□□□ 1.06
YIF1A-213ENST00000534374 C17orf105B2RV13 164 aa21.65■■□□□ 1.06
YIF1A-213ENST00000534374 STX16-NPEPL1H3BU86 382 aa21.65■■□□□ 1.06
YIF1A-213ENST00000534374 CCL21O00585 134 aa21.65■■□□□ 1.06
YIF1A-213ENST00000534374 PLPP1O14494 284 aa21.65■■□□□ 1.06
YIF1A-213ENST00000534374 STX16O14662 325 aa21.65■■□□□ 1.06
YIF1A-213ENST00000534374 PRKNO60260 465 aaPredicted RBP21.65■■□□□ 1.06
YIF1A-213ENST00000534374 CLDN9O95484 217 aa21.65■■□□□ 1.06
YIF1A-213ENST00000534374 RPS13P62277 151 aaKnown RBP21.65■■□□□ 1.06
YIF1A-213ENST00000534374 SPPL2CQ8IUH8 684 aa21.65■■□□□ 1.06
YIF1A-213ENST00000534374 SULF2Q8IWU5 870 aa21.65■■□□□ 1.06
YIF1A-213ENST00000534374 SLC34A3Q8N130 599 aa21.65■■□□□ 1.06
YIF1A-213ENST00000534374 CYP4Z2PQ8N1L4 340 aa21.65■■□□□ 1.06
YIF1A-213ENST00000534374 RNF175Q8N4F7 328 aa21.65■■□□□ 1.06
YIF1A-213ENST00000534374 PTGR2Q8N8N7 351 aaPredicted RBP21.65■■□□□ 1.06
YIF1A-213ENST00000534374 WDR20Q8TBZ3 569 aa21.65■■□□□ 1.06
YIF1A-213ENST00000534374 DCAKDQ8WVC6 231 aa21.65■■□□□ 1.06
YIF1A-213ENST00000534374 NTMT1Q9BV86 223 aa21.65■■□□□ 1.06
YIF1A-213ENST00000534374 RPF2Q9H7B2 306 aaKnown RBP21.65■■□□□ 1.06
YIF1A-213ENST00000534374 PHF11Q9UIL8 331 aa21.65■■□□□ 1.06
YIF1A-213ENST00000534374 RNF11Q9Y3C5 154 aa21.65■■□□□ 1.06
YIF1A-213ENST00000534374 CELSR2Q9HCU4 2923 aa21.65■■□□□ 1.06
YIF1A-213ENST00000534374 POC1B-GALNT4F8VUJ3 575 aa21.64■■□□□ 1.05
YIF1A-213ENST00000534374 ZNF24P17028 368 aa21.64■■□□□ 1.05
YIF1A-213ENST00000534374 DCTP40126 519 aa21.64■■□□□ 1.05
YIF1A-213ENST00000534374 C10orf62Q5T681 223 aaPredicted RBP21.64■■□□□ 1.05
YIF1A-213ENST00000534374 LGSNQ5TDP6 509 aa21.64■■□□□ 1.05
YIF1A-213ENST00000534374 BNC2Q6ZN30 1099 aaPredicted RBP21.64■■□□□ 1.05
YIF1A-213ENST00000534374 GHDCQ8N2G8 530 aa21.64■■□□□ 1.05
YIF1A-213ENST00000534374 CPSF7Q8N684 471 aaKnown RBP21.64■■□□□ 1.05
YIF1A-213ENST00000534374 CEP112Q8N8E3 955 aa21.64■■□□□ 1.05
YIF1A-213ENST00000534374 OR5L2Q8NGL0 311 aa21.64■■□□□ 1.05
YIF1A-213ENST00000534374 ATP6V1E2Q96A05 226 aa21.64■■□□□ 1.05
YIF1A-213ENST00000534374 PHF21BQ96EK2 531 aa21.64■■□□□ 1.05
YIF1A-213ENST00000534374 RBM18Q96H35 190 aaKnown RBP21.64■■□□□ 1.05
YIF1A-213ENST00000534374 MRPL57Q9BQC6 102 aaKnown RBP21.64■■□□□ 1.05
YIF1A-213ENST00000534374 SORBS1Q9BX66 1292 aaKnown RBP21.64■■□□□ 1.05
YIF1A-213ENST00000534374 OR8D2Q9GZM6 311 aa21.64■■□□□ 1.05
YIF1A-213ENST00000534374 NOL11Q9H8H0 719 aaKnown RBP21.64■■□□□ 1.05
YIF1A-213ENST00000534374 DDX31Q9H8H2 851 aaKnown RBP21.64■■□□□ 1.05
YIF1A-213ENST00000534374 TIMMDC1Q9NPL8 285 aa21.64■■□□□ 1.05
YIF1A-213ENST00000534374 MYOCOSA0A1B0GUC4 107 aa21.63■■□□□ 1.05
YIF1A-213ENST00000534374 OR7A17O14581 309 aa21.63■■□□□ 1.05
YIF1A-213ENST00000534374 PROM1O43490 865 aa21.63■■□□□ 1.05
YIF1A-213ENST00000534374 PEX1O43933 1283 aa21.63■■□□□ 1.05
YIF1A-213ENST00000534374 SMIM24O75264 130 aa21.63■■□□□ 1.05
YIF1A-213ENST00000534374 OR2J2O76002 312 aa21.63■■□□□ 1.05
YIF1A-213ENST00000534374 SNRPAP09012 282 aaKnown RBP21.63■■□□□ 1.05
YIF1A-213ENST00000534374 COX7A2P14406 83 aa21.63■■□□□ 1.05
YIF1A-213ENST00000534374 BSGP35613 385 aa21.63■■□□□ 1.05
YIF1A-213ENST00000534374 STT3AP46977 705 aa21.63■■□□□ 1.05
YIF1A-213ENST00000534374 ART3Q13508 389 aa21.63■■□□□ 1.05
YIF1A-213ENST00000534374 RNFT1Q5M7Z0 435 aa21.63■■□□□ 1.05
YIF1A-213ENST00000534374 MRM1Q6IN84 353 aaKnown RBP21.63■■□□□ 1.05
YIF1A-213ENST00000534374 MDGA2Q7Z553 956 aa21.63■■□□□ 1.05
YIF1A-213ENST00000534374 C16orf52Q8NHV5 167 aa21.63■■□□□ 1.05
YIF1A-213ENST00000534374 SLC2A12Q8TD20 617 aa21.63■■□□□ 1.05
YIF1A-213ENST00000534374 CCDC120Q96HB5 630 aa21.63■■□□□ 1.05
YIF1A-213ENST00000534374 MAGED4Q96JG8 741 aa21.63■■□□□ 1.05
YIF1A-213ENST00000534374 SCYL1Q96KG9 808 aa21.63■■□□□ 1.05
YIF1A-213ENST00000534374 ZNF717Q9BY31 904 aaPredicted RBP21.63■■□□□ 1.05
YIF1A-213ENST00000534374 TSPAN10Q9H1Z9 355 aaPredicted RBP21.63■■□□□ 1.05
YIF1A-213ENST00000534374 ATG4BQ9Y4P1 393 aa21.63■■□□□ 1.05
YIF1A-213ENST00000534374 A8MVJ9 347 aa21.62■■□□□ 1.05
YIF1A-213ENST00000534374 TRIM49D1C9J1S8 452 aa21.62■■□□□ 1.05
YIF1A-213ENST00000534374 FGF17O60258 216 aa21.62■■□□□ 1.05
YIF1A-213ENST00000534374 ABHD2P08910 425 aa21.62■■□□□ 1.05
YIF1A-213ENST00000534374 BUD31P41223 144 aaPredicted RBP21.62■■□□□ 1.05
YIF1A-213ENST00000534374 MEOX1P50221 254 aa21.62■■□□□ 1.05
YIF1A-213ENST00000534374 CCNG1P51959 295 aa21.62■■□□□ 1.05
YIF1A-213ENST00000534374 RNF4P78317 190 aa21.62■■□□□ 1.05
YIF1A-213ENST00000534374 TNFRSF17Q02223 184 aa21.62■■□□□ 1.05
YIF1A-213ENST00000534374 ID2Q02363 134 aa21.62■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms