RNA–Protein interactions for RNA: ENST00000533438.1

CLCF1-202, Transcript of cardiotrophin like cytokine factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CLCF1, Length 967 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCF1-202ENST00000533438 CCNT2O60583 730 aaKnown RBP10.54□□□□□ -0.72
CLCF1-202ENST00000533438 MYO1DO94832 1006 aa10.54□□□□□ -0.72
CLCF1-202ENST00000533438 PYGBP11216 843 aa10.54□□□□□ -0.72
CLCF1-202ENST00000533438 COL6A2P12110 1019 aa10.54□□□□□ -0.72
CLCF1-202ENST00000533438 TFEBP19484 476 aa10.54□□□□□ -0.72
CLCF1-202ENST00000533438 CERS1P27544 350 aa10.54□□□□□ -0.72
CLCF1-202ENST00000533438 PPP2R1BP30154 601 aa10.54□□□□□ -0.72
CLCF1-202ENST00000533438 CASP2P42575 452 aa10.54□□□□□ -0.72
CLCF1-202ENST00000533438 MTTPP55157 894 aa10.54□□□□□ -0.72
CLCF1-202ENST00000533438 LIM2P55344 173 aa10.54□□□□□ -0.72
CLCF1-202ENST00000533438 ADORA2A-AS1P86434 159 aa10.54□□□□□ -0.72
CLCF1-202ENST00000533438 PCDH1Q08174 1060 aa10.54□□□□□ -0.72
CLCF1-202ENST00000533438 LAPTM5Q13571 262 aa10.54□□□□□ -0.72
CLCF1-202ENST00000533438 TBCCQ15814 346 aa10.54□□□□□ -0.72
CLCF1-202ENST00000533438 XKR6Q5GH73 641 aa10.54□□□□□ -0.72
CLCF1-202ENST00000533438 RNFT1Q5M7Z0 435 aa10.54□□□□□ -0.72
CLCF1-202ENST00000533438 RAPH1Q70E73 1250 aa10.54□□□□□ -0.72
CLCF1-202ENST00000533438 LRRC70Q7Z2Q7 622 aa10.54□□□□□ -0.72
CLCF1-202ENST00000533438 UBE3DQ7Z6J8 389 aa10.54□□□□□ -0.72
CLCF1-202ENST00000533438 MRGPRGQ86SM5 289 aa10.54□□□□□ -0.72
CLCF1-202ENST00000533438 ISCA2Q86U28 154 aa10.54□□□□□ -0.72
CLCF1-202ENST00000533438 LCA5Q86VQ0 697 aa10.54□□□□□ -0.72
CLCF1-202ENST00000533438 SPPL2CQ8IUH8 684 aa10.54□□□□□ -0.72
CLCF1-202ENST00000533438 CHERPQ8IWX8 916 aaKnown RBP10.54□□□□□ -0.72
CLCF1-202ENST00000533438 CPSF7Q8N684 471 aaKnown RBP10.54□□□□□ -0.72
CLCF1-202ENST00000533438 SNX31Q8N9S9 440 aa10.54□□□□□ -0.72
CLCF1-202ENST00000533438 UBTD2Q8WUN7 234 aa10.54□□□□□ -0.72
CLCF1-202ENST00000533438 NCLNQ969V3 563 aa10.54□□□□□ -0.72
CLCF1-202ENST00000533438 VMP1Q96GC9 406 aa10.54□□□□□ -0.72
CLCF1-202ENST00000533438 SMC6Q96SB8 1091 aa10.54□□□□□ -0.72
CLCF1-202ENST00000533438 ATOH8Q96SQ7 321 aa10.54□□□□□ -0.72
CLCF1-202ENST00000533438 CSF3RQ99062 836 aa10.54□□□□□ -0.72
CLCF1-202ENST00000533438 CD244Q9BZW8 370 aa10.54□□□□□ -0.72
CLCF1-202ENST00000533438 TSPAN10Q9H1Z9 355 aaPredicted RBP10.54□□□□□ -0.72
CLCF1-202ENST00000533438 PNO1Q9NRX1 252 aaKnown RBP10.54□□□□□ -0.72
CLCF1-202ENST00000533438 FAM53CQ9NYF3 392 aa10.54□□□□□ -0.72
CLCF1-202ENST00000533438 KCMF1Q9P0J7 381 aa10.54□□□□□ -0.72
CLCF1-202ENST00000533438 SH3BGRL2Q9UJC5 107 aa10.54□□□□□ -0.72
CLCF1-202ENST00000533438 TINAGQ9UJW2 476 aa10.54□□□□□ -0.72
CLCF1-202ENST00000533438 NPIPA1Q9UND3 350 aa10.54□□□□□ -0.72
CLCF1-202ENST00000533438 MRPS33Q9Y291 106 aaKnown RBP10.54□□□□□ -0.72
CLCF1-202ENST00000533438 EML6Q6ZMW3 1958 aa10.54□□□□□ -0.72
CLCF1-202ENST00000533438 HIVEP1P15822 2718 aa10.53□□□□□ -0.72
CLCF1-202ENST00000533438 SYNDIG1LA6NDD5 238 aa10.53□□□□□ -0.72
CLCF1-202ENST00000533438 TMEM200CA6NKL6 621 aa10.53□□□□□ -0.72
CLCF1-202ENST00000533438 GOLGA8RI6L899 631 aa10.53□□□□□ -0.72
CLCF1-202ENST00000533438 TYROBPO43914 113 aa10.53□□□□□ -0.72
CLCF1-202ENST00000533438 PRKNO60260 465 aaPredicted RBP10.53□□□□□ -0.72
CLCF1-202ENST00000533438 ITGA10O75578 1167 aa10.53□□□□□ -0.72
CLCF1-202ENST00000533438 S100BP04271 92 aaPredicted RBP10.53□□□□□ -0.72
CLCF1-202ENST00000533438 GSTA1P08263 222 aa10.53□□□□□ -0.72
CLCF1-202ENST00000533438 LTA4HP09960 611 aaKnown RBP10.53□□□□□ -0.72
CLCF1-202ENST00000533438 CREB1P16220 341 aa10.53□□□□□ -0.72
CLCF1-202ENST00000533438 GRNP28799 593 aaKnown RBP10.53□□□□□ -0.72
CLCF1-202ENST00000533438 IRF8Q02556 426 aa10.53□□□□□ -0.72
CLCF1-202ENST00000533438 SLC13A2Q13183 592 aa10.53□□□□□ -0.72
CLCF1-202ENST00000533438 CHIT1Q13231 466 aa10.53□□□□□ -0.72
CLCF1-202ENST00000533438 RPTNQ6XPR3 784 aa10.53□□□□□ -0.72
CLCF1-202ENST00000533438 ZNF793Q6ZN11 406 aa10.53□□□□□ -0.72
CLCF1-202ENST00000533438 BNC2Q6ZN30 1099 aaPredicted RBP10.53□□□□□ -0.72
CLCF1-202ENST00000533438 LAS2Q8IYD9 372 aa10.53□□□□□ -0.72
CLCF1-202ENST00000533438 C4orf33Q8N1A6 199 aa10.53□□□□□ -0.72
CLCF1-202ENST00000533438 GHDCQ8N2G8 530 aa10.53□□□□□ -0.72
CLCF1-202ENST00000533438 BANPQ8N9N5 519 aa10.53□□□□□ -0.72
CLCF1-202ENST00000533438 STAG3L4Q8TBR4 150 aa10.53□□□□□ -0.72
CLCF1-202ENST00000533438 ZNF473Q8WTR7 871 aaKnown RBP10.53□□□□□ -0.72
CLCF1-202ENST00000533438 EXT2Q93063 718 aa10.53□□□□□ -0.72
CLCF1-202ENST00000533438 MARVELD3Q96A59 401 aa10.53□□□□□ -0.72
CLCF1-202ENST00000533438 TMEM125Q96AQ2 219 aa10.53□□□□□ -0.72
CLCF1-202ENST00000533438 APOPT1Q96IL0 206 aa10.53□□□□□ -0.72
CLCF1-202ENST00000533438 MAGED4Q96JG8 741 aa10.53□□□□□ -0.72
CLCF1-202ENST00000533438 KCNC2Q96PR1 638 aa10.53□□□□□ -0.72
CLCF1-202ENST00000533438 PHF12Q96QT6 1004 aa10.53□□□□□ -0.72
CLCF1-202ENST00000533438 F2RL3Q96RI0 385 aa10.53□□□□□ -0.72
CLCF1-202ENST00000533438 MS4A8Q9BY19 250 aa10.53□□□□□ -0.72
CLCF1-202ENST00000533438 VPS11Q9H270 941 aa10.53□□□□□ -0.72
CLCF1-202ENST00000533438 ALG9Q9H6U8 611 aa10.53□□□□□ -0.72
CLCF1-202ENST00000533438 COPS7BQ9H9Q2 264 aaPredicted RBP10.53□□□□□ -0.72
CLCF1-202ENST00000533438 NMRAL1Q9HBL8 299 aa10.53□□□□□ -0.72
CLCF1-202ENST00000533438 ADAP2Q9NPF8 381 aa10.53□□□□□ -0.72
CLCF1-202ENST00000533438 NUDT4Q9NZJ9 180 aa10.53□□□□□ -0.72
CLCF1-202ENST00000533438 KLF13Q9Y2Y9 288 aaPredicted RBP10.53□□□□□ -0.72
CLCF1-202ENST00000533438 ACOT9Q9Y305 439 aa10.53□□□□□ -0.72
CLCF1-202ENST00000533438 PCNX1Q96RV3 2341 aa10.52□□□□□ -0.72
CLCF1-202ENST00000533438 SETD2Q9BYW2 2564 aaPredicted RBP10.52□□□□□ -0.73
CLCF1-202ENST00000533438 ARHGAP10A1A4S6 786 aa10.52□□□□□ -0.73
CLCF1-202ENST00000533438 K7EPI3 171 aa10.52□□□□□ -0.73
CLCF1-202ENST00000533438 CTNSO60931 367 aa10.52□□□□□ -0.73
CLCF1-202ENST00000533438 KERAO60938 352 aa10.52□□□□□ -0.73
CLCF1-202ENST00000533438 GLRA3O75311 464 aa10.52□□□□□ -0.73
CLCF1-202ENST00000533438 SCELO95171 688 aa10.52□□□□□ -0.73
CLCF1-202ENST00000533438 MTHFD2P13995 350 aa10.52□□□□□ -0.73
CLCF1-202ENST00000533438 ZNF24P17028 368 aa10.52□□□□□ -0.73
CLCF1-202ENST00000533438 AGAP20933 346 aa10.52□□□□□ -0.73
CLCF1-202ENST00000533438 CRHR1P34998 444 aa10.52□□□□□ -0.73
CLCF1-202ENST00000533438 CCT5P48643 541 aa10.52□□□□□ -0.73
CLCF1-202ENST00000533438 MEOX1P50221 254 aa10.52□□□□□ -0.73
CLCF1-202ENST00000533438 SLC18A1P54219 525 aa10.52□□□□□ -0.73
CLCF1-202ENST00000533438 CASP6P55212 293 aa10.52□□□□□ -0.73
CLCF1-202ENST00000533438 HSF1Q00613 529 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms