RNA–Protein interactions for RNA: ENST00000533244.5

CCS-208, Transcript of copper chaperone for superoxide dismutase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCS, Length 1,430 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-208ENST00000533244 SERTM1A2A2V5 107 aa19.11■□□□□ 0.65
CCS-208ENST00000533244 CCDC151A5D8V7 595 aa19.11■□□□□ 0.65
CCS-208ENST00000533244 FGF17O60258 216 aa19.11■□□□□ 0.65
CCS-208ENST00000533244 LDB3O75112 727 aa19.11■□□□□ 0.65
CCS-208ENST00000533244 SPAG7O75391 227 aa19.11■□□□□ 0.65
CCS-208ENST00000533244 HMOX2P30519 316 aa19.11■□□□□ 0.65
CCS-208ENST00000533244 GPR143P51810 404 aa19.11■□□□□ 0.65
CCS-208ENST00000533244 SERTAD2Q14140 314 aa19.11■□□□□ 0.65
CCS-208ENST00000533244 CYP20A1Q6UW02 462 aa19.11■□□□□ 0.65
CCS-208ENST00000533244 COMMD6Q7Z4G1 85 aa19.11■□□□□ 0.65
CCS-208ENST00000533244 CUZD1Q86UP6 607 aa19.11■□□□□ 0.65
CCS-208ENST00000533244 LGI4Q8N135 537 aa19.11■□□□□ 0.65
CCS-208ENST00000533244 C7orf57Q8NEG2 295 aa19.11■□□□□ 0.65
CCS-208ENST00000533244 B3GNT7Q8NFL0 401 aa19.11■□□□□ 0.65
CCS-208ENST00000533244 TCP10LQ8TDR4 215 aa19.11■□□□□ 0.65
CCS-208ENST00000533244 HAS2Q92819 552 aa19.11■□□□□ 0.65
CCS-208ENST00000533244 KCNA7Q96RP8 456 aa19.11■□□□□ 0.65
CCS-208ENST00000533244 ALOXE3Q9BYJ1 711 aa19.11■□□□□ 0.65
CCS-208ENST00000533244 TRIM4Q9C037 500 aa19.11■□□□□ 0.65
CCS-208ENST00000533244 TEKT2Q9UIF3 430 aa19.11■□□□□ 0.65
CCS-208ENST00000533244 NBASA2RRP1 2371 aa19.1■□□□□ 0.65
CCS-208ENST00000533244 A0A1W2PR48 441 aa19.1■□□□□ 0.65
CCS-208ENST00000533244 A8MUA0 341 aa19.1■□□□□ 0.65
CCS-208ENST00000533244 TRIM13O60858 407 aa19.1■□□□□ 0.65
CCS-208ENST00000533244 ULK1O75385 1050 aa19.1■□□□□ 0.65
CCS-208ENST00000533244 MYO1DO94832 1006 aa19.1■□□□□ 0.65
CCS-208ENST00000533244 GBAP04062 536 aa19.1■□□□□ 0.65
CCS-208ENST00000533244 BUD31P41223 144 aaPredicted RBP19.1■□□□□ 0.65
CCS-208ENST00000533244 FOXA1P55317 472 aa19.1■□□□□ 0.65
CCS-208ENST00000533244 STX4Q12846 297 aa19.1■□□□□ 0.65
CCS-208ENST00000533244 CFAP157Q5JU67 520 aa19.1■□□□□ 0.65
CCS-208ENST00000533244 PAGE2Q7Z2X7 111 aa19.1■□□□□ 0.65
CCS-208ENST00000533244 ARMC10Q8N2F6 343 aa19.1■□□□□ 0.65
CCS-208ENST00000533244 KIF2BQ8N4N8 673 aa19.1■□□□□ 0.65
CCS-208ENST00000533244 GBP7Q8N8V2 638 aaPredicted RBP19.1■□□□□ 0.65
CCS-208ENST00000533244 TANKQ92844 425 aa19.1■□□□□ 0.65
CCS-208ENST00000533244 ZNF354BQ96LW1 612 aa19.1■□□□□ 0.65
CCS-208ENST00000533244 GATA5Q9BWX5 397 aaPredicted RBP19.1■□□□□ 0.65
CCS-208ENST00000533244 ACPTQ9BZG2 426 aa19.1■□□□□ 0.65
CCS-208ENST00000533244 PNO1Q9NRX1 252 aaKnown RBP19.1■□□□□ 0.65
CCS-208ENST00000533244 NMRK1Q9NWW6 199 aa19.1■□□□□ 0.65
CCS-208ENST00000533244 LUZP4Q9P127 313 aa19.1■□□□□ 0.65
CCS-208ENST00000533244 VPS29Q9UBQ0 182 aa19.1■□□□□ 0.65
CCS-208ENST00000533244 TIMM22Q9Y584 194 aa19.1■□□□□ 0.65
CCS-208ENST00000533244 RGS16O15492 202 aaPredicted RBP19.09■□□□□ 0.65
CCS-208ENST00000533244 PRKRAO75569 313 aaKnown RBP19.09■□□□□ 0.65
CCS-208ENST00000533244 AIFM1O95831 613 aa19.09■□□□□ 0.65
CCS-208ENST00000533244 KLK1P06870 262 aa19.09■□□□□ 0.65
CCS-208ENST00000533244 NR2F6P10588 404 aa19.09■□□□□ 0.65
CCS-208ENST00000533244 ALDH3A1P30838 453 aa19.09■□□□□ 0.65
CCS-208ENST00000533244 TLX1P31314 330 aaPredicted RBP19.09■□□□□ 0.65
CCS-208ENST00000533244 MLLT10P55197 1068 aa19.09■□□□□ 0.65
CCS-208ENST00000533244 ACER2Q5QJU3 275 aa19.09■□□□□ 0.65
CCS-208ENST00000533244 ABHD17BQ5VST6 288 aa19.09■□□□□ 0.65
CCS-208ENST00000533244 LRIG3Q6UXM1 1119 aa19.09■□□□□ 0.65
CCS-208ENST00000533244 CRLF3Q8IUI8 442 aa19.09■□□□□ 0.65
CCS-208ENST00000533244 DNAJB14Q8TBM8 379 aa19.09■□□□□ 0.65
CCS-208ENST00000533244 PTPMT1Q8WUK0 201 aaPredicted RBP19.09■□□□□ 0.65
CCS-208ENST00000533244 TRMOQ9BU70 441 aa19.09■□□□□ 0.65
CCS-208ENST00000533244 ILKAPQ9H0C8 392 aaPredicted RBP19.09■□□□□ 0.65
CCS-208ENST00000533244 SSU72Q9NP77 194 aaKnown RBP19.09■□□□□ 0.65
CCS-208ENST00000533244 TNFRSF12AQ9NP84 129 aa19.09■□□□□ 0.65
CCS-208ENST00000533244 SLAMF7Q9NQ25 335 aa19.09■□□□□ 0.65
CCS-208ENST00000533244 TEX10Q9NXF1 929 aaPredicted RBP19.09■□□□□ 0.65
CCS-208ENST00000533244 ZNF223Q9UK11 482 aaPredicted RBP19.09■□□□□ 0.65
CCS-208ENST00000533244 PCDHGA10Q9Y5H3 936 aa19.09■□□□□ 0.65
CCS-208ENST00000533244 DYTNA2CJ06 578 aa19.08■□□□□ 0.65
CCS-208ENST00000533244 TTLL8A6PVC2 850 aa19.08■□□□□ 0.65
CCS-208ENST00000533244 A8MUI8 341 aa19.08■□□□□ 0.65
CCS-208ENST00000533244 ERLIN1O75477 346 aa19.08■□□□□ 0.65
CCS-208ENST00000533244 WDPCPO95876 746 aa19.08■□□□□ 0.65
CCS-208ENST00000533244 CHN1P15882 459 aa19.08■□□□□ 0.65
CCS-208ENST00000533244 ETV4P43268 484 aa19.08■□□□□ 0.65
CCS-208ENST00000533244 TNFSF10P50591 281 aa19.08■□□□□ 0.65
CCS-208ENST00000533244 TAS2R50P59544 299 aa19.08■□□□□ 0.65
CCS-208ENST00000533244 FOXK1P85037 733 aa19.08■□□□□ 0.65
CCS-208ENST00000533244 FOLH1Q04609 750 aa19.08■□□□□ 0.65
CCS-208ENST00000533244 BIKQ13323 160 aa19.08■□□□□ 0.65
CCS-208ENST00000533244 TLR1Q15399 786 aa19.08■□□□□ 0.65
CCS-208ENST00000533244 BEND6Q5SZJ8 279 aaPredicted RBP19.08■□□□□ 0.65
CCS-208ENST00000533244 CEP85LQ5SZL2 805 aa19.08■□□□□ 0.65
CCS-208ENST00000533244 FCRLBQ6BAA4 426 aa19.08■□□□□ 0.65
CCS-208ENST00000533244 CROCCP2Q86T23 111 aa19.08■□□□□ 0.65
CCS-208ENST00000533244 TMEM132CQ8N3T6 1108 aa19.08■□□□□ 0.65
CCS-208ENST00000533244 SLC5A8Q8N695 610 aa19.08■□□□□ 0.65
CCS-208ENST00000533244 CATSPER1Q8NEC5 780 aa19.08■□□□□ 0.65
CCS-208ENST00000533244 CHTF18Q8WVB6 975 aa19.08■□□□□ 0.65
CCS-208ENST00000533244 MIB2Q96AX9 1013 aa19.08■□□□□ 0.65
CCS-208ENST00000533244 PLA2G3Q9NZ20 509 aa19.08■□□□□ 0.65
CCS-208ENST00000533244 STMN3Q9NZ72 180 aa19.08■□□□□ 0.65
CCS-208ENST00000533244 UBR5O95071 2799 aaPredicted RBP19.08■□□□□ 0.65
CCS-208ENST00000533244 PRRC2CQ9Y520 2896 aaKnown RBP19.08■□□□□ 0.65
CCS-208ENST00000533244 MAN1A2O60476 641 aa19.08■□□□□ 0.64
CCS-208ENST00000533244 UQCRHP07919 91 aa19.08■□□□□ 0.64
CCS-208ENST00000533244 STT3AP46977 705 aa19.08■□□□□ 0.64
CCS-208ENST00000533244 ARG2P78540 354 aa19.08■□□□□ 0.64
CCS-208ENST00000533244 ID2Q02363 134 aa19.08■□□□□ 0.64
CCS-208ENST00000533244 ASPHQ12797 758 aa19.08■□□□□ 0.64
CCS-208ENST00000533244 ZNF169Q14929 603 aaPredicted RBP19.08■□□□□ 0.64
CCS-208ENST00000533244 MEP1AQ16819 746 aa19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms