RNA–Protein interactions for RNA: ENST00000532725.1

CPSF1-209, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 2

Gene CPSF1, Length 597 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-209ENST00000532725 PNO1Q9NRX1 252 aaKnown RBP18.59■□□□□ 0.57
CPSF1-209ENST00000532725 PTGFRNQ9P2B2 879 aa18.59■□□□□ 0.57
CPSF1-209ENST00000532725 VTI1BQ9UEU0 232 aa18.59■□□□□ 0.57
CPSF1-209ENST00000532725 HEMK1Q9Y5R4 338 aaPredicted RBP18.59■□□□□ 0.57
CPSF1-209ENST00000532725 ACTL7BQ9Y614 415 aa18.59■□□□□ 0.57
CPSF1-209ENST00000532725 MYOCOSA0A1B0GUC4 107 aa18.58■□□□□ 0.56
CPSF1-209ENST00000532725 SAGE2PA6NJ88 616 aa18.58■□□□□ 0.56
CPSF1-209ENST00000532725 WASHC1A8K0Z3 465 aa18.58■□□□□ 0.56
CPSF1-209ENST00000532725 BPGMP07738 259 aa18.58■□□□□ 0.56
CPSF1-209ENST00000532725 SERPINB3P29508 390 aa18.58■□□□□ 0.56
CPSF1-209ENST00000532725 PPP2R1BP30154 601 aa18.58■□□□□ 0.56
CPSF1-209ENST00000532725 TLX1P31314 330 aaPredicted RBP18.58■□□□□ 0.56
CPSF1-209ENST00000532725 GPR143P51810 404 aa18.58■□□□□ 0.56
CPSF1-209ENST00000532725 IGLV3-21P80748 117 aaPredicted RBP18.58■□□□□ 0.56
CPSF1-209ENST00000532725 TNFRSF17Q02223 184 aa18.58■□□□□ 0.56
CPSF1-209ENST00000532725 MFAP5Q13361 173 aa18.58■□□□□ 0.56
CPSF1-209ENST00000532725 MPP2Q14168 576 aa18.58■□□□□ 0.56
CPSF1-209ENST00000532725 COLEC12Q5KU26 742 aa18.58■□□□□ 0.56
CPSF1-209ENST00000532725 B3GNTL1Q67FW5 361 aaPredicted RBP18.58■□□□□ 0.56
CPSF1-209ENST00000532725 PAGE2Q7Z2X7 111 aa18.58■□□□□ 0.56
CPSF1-209ENST00000532725 COMMD6Q7Z4G1 85 aa18.58■□□□□ 0.56
CPSF1-209ENST00000532725 ZADH2Q8N4Q0 377 aa18.58■□□□□ 0.56
CPSF1-209ENST00000532725 OR6Y1Q8NGX8 325 aa18.58■□□□□ 0.56
CPSF1-209ENST00000532725 UCN3Q969E3 161 aa18.58■□□□□ 0.56
CPSF1-209ENST00000532725 TRMOQ9BU70 441 aa18.58■□□□□ 0.56
CPSF1-209ENST00000532725 MFRPQ9BY79 579 aa18.58■□□□□ 0.56
CPSF1-209ENST00000532725 ACPTQ9BZG2 426 aa18.58■□□□□ 0.56
CPSF1-209ENST00000532725 SHCBP1LQ9BZQ2 653 aa18.58■□□□□ 0.56
CPSF1-209ENST00000532725 PPIEQ9UNP9 301 aaKnown RBP18.58■□□□□ 0.56
CPSF1-209ENST00000532725 SYNDIG1LA6NDD5 238 aa18.57■□□□□ 0.56
CPSF1-209ENST00000532725 NPHS1O60500 1241 aa18.57■□□□□ 0.56
CPSF1-209ENST00000532725 PRKRAO75569 313 aaKnown RBP18.57■□□□□ 0.56
CPSF1-209ENST00000532725 CASRP41180 1078 aa18.57■□□□□ 0.56
CPSF1-209ENST00000532725 BUD31P41223 144 aaPredicted RBP18.57■□□□□ 0.56
CPSF1-209ENST00000532725 STX4Q12846 297 aa18.57■□□□□ 0.56
CPSF1-209ENST00000532725 TERF2Q15554 542 aa18.57■□□□□ 0.56
CPSF1-209ENST00000532725 CCNYL2Q5T2Q4 361 aa18.57■□□□□ 0.56
CPSF1-209ENST00000532725 SCIMPQ6UWF3 145 aa18.57■□□□□ 0.56
CPSF1-209ENST00000532725 LINC00696Q6ZRV3 163 aa18.57■□□□□ 0.56
CPSF1-209ENST00000532725 OR4N5Q8IXE1 308 aa18.57■□□□□ 0.56
CPSF1-209ENST00000532725 TM9SF4Q92544 642 aa18.57■□□□□ 0.56
CPSF1-209ENST00000532725 KCNK13Q9HB14 408 aa18.57■□□□□ 0.56
CPSF1-209ENST00000532725 A8MUI8 341 aa18.56■□□□□ 0.56
CPSF1-209ENST00000532725 FGF17O60258 216 aa18.56■□□□□ 0.56
CPSF1-209ENST00000532725 MYO1DO94832 1006 aa18.56■□□□□ 0.56
CPSF1-209ENST00000532725 FGF4P08620 206 aa18.56■□□□□ 0.56
CPSF1-209ENST00000532725 MYZAPP0CAP1 466 aa18.56■□□□□ 0.56
CPSF1-209ENST00000532725 UROSP10746 265 aa18.56■□□□□ 0.56
CPSF1-209ENST00000532725 HMGCS1Q01581 520 aa18.56■□□□□ 0.56
CPSF1-209ENST00000532725 ID2Q02363 134 aa18.56■□□□□ 0.56
CPSF1-209ENST00000532725 BIKQ13323 160 aa18.56■□□□□ 0.56
CPSF1-209ENST00000532725 SERTAD2Q14140 314 aa18.56■□□□□ 0.56
CPSF1-209ENST00000532725 CASP8Q14790 479 aa18.56■□□□□ 0.56
CPSF1-209ENST00000532725 PLEKHN1Q494U1 663 aaPredicted RBP18.56■□□□□ 0.56
CPSF1-209ENST00000532725 ATG14Q6ZNE5 492 aa18.56■□□□□ 0.56
CPSF1-209ENST00000532725 TRIM46Q7Z4K8 759 aa18.56■□□□□ 0.56
CPSF1-209ENST00000532725 CUZD1Q86UP6 607 aa18.56■□□□□ 0.56
CPSF1-209ENST00000532725 C1orf52Q8N6N3 182 aaKnown RBP18.56■□□□□ 0.56
CPSF1-209ENST00000532725 C7orf57Q8NEG2 295 aa18.56■□□□□ 0.56
CPSF1-209ENST00000532725 PTPMT1Q8WUK0 201 aaPredicted RBP18.56■□□□□ 0.56
CPSF1-209ENST00000532725 HAS2Q92819 552 aa18.56■□□□□ 0.56
CPSF1-209ENST00000532725 TM4SF18Q96CE8 201 aa18.56■□□□□ 0.56
CPSF1-209ENST00000532725 C11orf24Q96F05 449 aaPredicted RBP18.56■□□□□ 0.56
CPSF1-209ENST00000532725 NPAS2Q99743 824 aa18.56■□□□□ 0.56
CPSF1-209ENST00000532725 ADAP2Q9NPF8 381 aa18.56■□□□□ 0.56
CPSF1-209ENST00000532725 STMN3Q9NZ72 180 aa18.56■□□□□ 0.56
CPSF1-209ENST00000532725 FASNP49327 2511 aaKnown RBP18.56■□□□□ 0.56
CPSF1-209ENST00000532725 GLOD5A6NK44 160 aa18.55■□□□□ 0.56
CPSF1-209ENST00000532725 PGRMC2O15173 223 aa18.55■□□□□ 0.56
CPSF1-209ENST00000532725 GPR75O95800 540 aa18.55■□□□□ 0.56
CPSF1-209ENST00000532725 AIFM1O95831 613 aa18.55■□□□□ 0.56
CPSF1-209ENST00000532725 IFNA16P05015 189 aa18.55■□□□□ 0.56
CPSF1-209ENST00000532725 CHRNGP07510 517 aa18.55■□□□□ 0.56
CPSF1-209ENST00000532725 DHRS4L1P0CG22 281 aa18.55■□□□□ 0.56
CPSF1-209ENST00000532725 SERPINB4P48594 390 aa18.55■□□□□ 0.56
CPSF1-209ENST00000532725 RAE1P78406 368 aaKnown RBP18.55■□□□□ 0.56
CPSF1-209ENST00000532725 FOLH1Q04609 750 aa18.55■□□□□ 0.56
CPSF1-209ENST00000532725 ELAVL1Q15717 326 aaKnown RBP18.55■□□□□ 0.56
CPSF1-209ENST00000532725 ARL13AQ5H913 290 aaPredicted RBP18.55■□□□□ 0.56
CPSF1-209ENST00000532725 SLC6A19Q695T7 634 aa18.55■□□□□ 0.56
CPSF1-209ENST00000532725 Q6ZS92 163 aa18.55■□□□□ 0.56
CPSF1-209ENST00000532725 ZCCHC23Q6ZST2 131 aa18.55■□□□□ 0.56
CPSF1-209ENST00000532725 TMEM132CQ8N3T6 1108 aa18.55■□□□□ 0.56
CPSF1-209ENST00000532725 KIF2BQ8N4N8 673 aa18.55■□□□□ 0.56
CPSF1-209ENST00000532725 Q8NA96 180 aa18.55■□□□□ 0.56
CPSF1-209ENST00000532725 APCDD1LQ8NCL9 501 aa18.55■□□□□ 0.56
CPSF1-209ENST00000532725 B3GNT7Q8NFL0 401 aa18.55■□□□□ 0.56
CPSF1-209ENST00000532725 DNAJB14Q8TBM8 379 aa18.55■□□□□ 0.56
CPSF1-209ENST00000532725 PNPLA2Q96AD5 504 aa18.55■□□□□ 0.56
CPSF1-209ENST00000532725 APIPQ96GX9 242 aa18.55■□□□□ 0.56
CPSF1-209ENST00000532725 EPS8L2Q9H6S3 715 aa18.55■□□□□ 0.56
CPSF1-209ENST00000532725 TMBIM4Q9HC24 238 aa18.55■□□□□ 0.56
CPSF1-209ENST00000532725 SIRT5Q9NXA8 310 aa18.55■□□□□ 0.56
CPSF1-209ENST00000532725 TEX10Q9NXF1 929 aaPredicted RBP18.55■□□□□ 0.56
CPSF1-209ENST00000532725 PLA2G3Q9NZ20 509 aa18.55■□□□□ 0.56
CPSF1-209ENST00000532725 B3GNT3Q9Y2A9 372 aa18.55■□□□□ 0.56
CPSF1-209ENST00000532725 CSAG2Q9Y5P2 127 aa18.55■□□□□ 0.56
CPSF1-209ENST00000532725 ARHGAP10A1A4S6 786 aa18.54■□□□□ 0.56
CPSF1-209ENST00000532725 AZIN1O14977 448 aa18.54■□□□□ 0.56
CPSF1-209ENST00000532725 TM9SF1O15321 606 aa18.54■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms