RNA–Protein interactions for RNA: ENST00000532285.1

CAPN1-222, Transcript of calpain 1, human

TSL 4

Gene CAPN1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CAPN1-222	ENST00000532285	SH2D5	Q6ZV89	423 aa		21.44	■■□□□ 1.02
CAPN1-222	ENST00000532285	HORMAD2	Q8N7B1	307 aa		21.44	■■□□□ 1.02
CAPN1-222	ENST00000532285	TRPC4AP	Q8TEL6	797 aa		21.44	■■□□□ 1.02
CAPN1-222	ENST00000532285	TANK	Q92844	425 aa		21.44	■■□□□ 1.02
CAPN1-222	ENST00000532285	DAZL	Q92904	295 aa	Known RBP	21.44	■■□□□ 1.02
CAPN1-222	ENST00000532285	NCLN	Q969V3	563 aa		21.44	■■□□□ 1.02
CAPN1-222	ENST00000532285	ANKRD9	Q96BM1	317 aa	Predicted RBP	21.44	■■□□□ 1.02
CAPN1-222	ENST00000532285	TMEM237	Q96Q45	408 aa		21.44	■■□□□ 1.02
CAPN1-222	ENST00000532285	AHSP	Q9NZD4	102 aa		21.44	■■□□□ 1.02
CAPN1-222	ENST00000532285	TRPS1	Q9UHF7	1281 aa		21.44	■■□□□ 1.02
CAPN1-222	ENST00000532285	SNX6	Q9UNH7	406 aa		21.44	■■□□□ 1.02
CAPN1-222	ENST00000532285	ATG4B	Q9Y4P1	393 aa		21.44	■■□□□ 1.02
CAPN1-222	ENST00000532285	SVIL	O95425	2214 aa		21.43	■■□□□ 1.02
CAPN1-222	ENST00000532285		A0A0A6YYD5	115 aa		21.43	■■□□□ 1.02
CAPN1-222	ENST00000532285		A0A1B0GTL3	188 aa		21.43	■■□□□ 1.02
CAPN1-222	ENST00000532285	MYOCOS	A0A1B0GUC4	107 aa		21.43	■■□□□ 1.02
CAPN1-222	ENST00000532285	ANKUB1	A6NFN9	424 aa		21.43	■■□□□ 1.02
CAPN1-222	ENST00000532285	SMIM23	A6NLE4	172 aa		21.43	■■□□□ 1.02
CAPN1-222	ENST00000532285	FCHO1	O14526	889 aa		21.43	■■□□□ 1.02
CAPN1-222	ENST00000532285	PROM1	O43490	865 aa		21.43	■■□□□ 1.02
CAPN1-222	ENST00000532285	CDH16	O75309	829 aa		21.43	■■□□□ 1.02
CAPN1-222	ENST00000532285	FAM58BP	P0C7Q3	252 aa		21.43	■■□□□ 1.02
CAPN1-222	ENST00000532285	TSPAN8	P19075	237 aa		21.43	■■□□□ 1.02
CAPN1-222	ENST00000532285	HNRNPH2	P55795	449 aa	Known RBP	21.43	■■□□□ 1.02
CAPN1-222	ENST00000532285	SRSF1	Q07955	248 aa	Known RBP eCLIP	21.43	■■□□□ 1.02
CAPN1-222	ENST00000532285	OR1C1	Q15619	314 aa		21.43	■■□□□ 1.02
CAPN1-222	ENST00000532285	EIF2S3L	Q2VIR3	472 aa	Known RBP	21.43	■■□□□ 1.02
CAPN1-222	ENST00000532285	FHL5	Q5TD97	284 aa		21.43	■■□□□ 1.02
CAPN1-222	ENST00000532285	NUDT13	Q86X67	352 aa		21.43	■■□□□ 1.02
CAPN1-222	ENST00000532285	MORN4	Q8NDC4	146 aa		21.43	■■□□□ 1.02
CAPN1-222	ENST00000532285	ST6GALNAC3	Q8NDV1	305 aa		21.43	■■□□□ 1.02
CAPN1-222	ENST00000532285	MDS2	Q8NDY4	140 aa		21.43	■■□□□ 1.02
CAPN1-222	ENST00000532285	OR14A16	Q8NHC5	309 aa		21.43	■■□□□ 1.02
CAPN1-222	ENST00000532285	EPS8L3	Q8TE67	593 aa	Known RBP	21.43	■■□□□ 1.02
CAPN1-222	ENST00000532285	PTPMT1	Q8WUK0	201 aa	Predicted RBP	21.43	■■□□□ 1.02
CAPN1-222	ENST00000532285	L3HYPDH	Q96EM0	354 aa		21.43	■■□□□ 1.02
CAPN1-222	ENST00000532285	SIGLEC12	Q96PQ1	595 aa		21.43	■■□□□ 1.02
CAPN1-222	ENST00000532285	ANKRD10	Q9NXR5	420 aa		21.43	■■□□□ 1.02
CAPN1-222	ENST00000532285	ASB4	Q9Y574	426 aa		21.43	■■□□□ 1.02
CAPN1-222	ENST00000532285	ZGRF1	Q86YA3	2104 aa		21.43	■■□□□ 1.02
CAPN1-222	ENST00000532285	FOXO6	A8MYZ6	492 aa		21.42	■■□□□ 1.02
CAPN1-222	ENST00000532285	RASAL1	O95294	804 aa		21.42	■■□□□ 1.02
CAPN1-222	ENST00000532285	MLYCD	O95822	493 aa		21.42	■■□□□ 1.02
CAPN1-222	ENST00000532285	EDN3	P14138	238 aa		21.42	■■□□□ 1.02
CAPN1-222	ENST00000532285	TNNI3	P19429	210 aa		21.42	■■□□□ 1.02
CAPN1-222	ENST00000532285	TPP2	P29144	1249 aa	Predicted RBP	21.42	■■□□□ 1.02
CAPN1-222	ENST00000532285	CCT5	P48643	541 aa		21.42	■■□□□ 1.02
CAPN1-222	ENST00000532285	IGLV3-21	P80748	117 aa	Predicted RBP	21.42	■■□□□ 1.02
CAPN1-222	ENST00000532285	OC90	Q02509	493 aa	Predicted RBP	21.42	■■□□□ 1.02
CAPN1-222	ENST00000532285	SGO1	Q5FBB7	561 aa		21.42	■■□□□ 1.02
CAPN1-222	ENST00000532285	C18orf63	Q68DL7	685 aa		21.42	■■□□□ 1.02
CAPN1-222	ENST00000532285	DNAJB8	Q8NHS0	232 aa		21.42	■■□□□ 1.02
CAPN1-222	ENST00000532285	CCDC126	Q96EE4	140 aa		21.42	■■□□□ 1.02
CAPN1-222	ENST00000532285	TAAR6	Q96RI8	345 aa		21.42	■■□□□ 1.02
CAPN1-222	ENST00000532285	ZNF382	Q96SR6	550 aa		21.42	■■□□□ 1.02
CAPN1-222	ENST00000532285	BRF2	Q9HAW0	419 aa		21.42	■■□□□ 1.02
CAPN1-222	ENST00000532285	OLAH	Q9NV23	265 aa		21.42	■■□□□ 1.02
CAPN1-222	ENST00000532285	ZNF225	Q9UK10	706 aa		21.42	■■□□□ 1.02
CAPN1-222	ENST00000532285	ZNF223	Q9UK11	482 aa	Predicted RBP	21.42	■■□□□ 1.02
CAPN1-222	ENST00000532285	ADAM29	Q9UKF5	820 aa		21.42	■■□□□ 1.02
CAPN1-222	ENST00000532285	EMCN	Q9ULC0	261 aa		21.42	■■□□□ 1.02
CAPN1-222	ENST00000532285	GRID1	Q9ULK0	1009 aa		21.42	■■□□□ 1.02
CAPN1-222	ENST00000532285	STK38L	Q9Y2H1	464 aa		21.42	■■□□□ 1.02
CAPN1-222	ENST00000532285	C17orf105	B2RV13	164 aa		21.41	■■□□□ 1.02
CAPN1-222	ENST00000532285	TMPRSS11D	O60235	418 aa		21.41	■■□□□ 1.02
CAPN1-222	ENST00000532285	FGF17	O60258	216 aa		21.41	■■□□□ 1.02
CAPN1-222	ENST00000532285	OR4F21	O95013	312 aa		21.41	■■□□□ 1.02
CAPN1-222	ENST00000532285	PDYN	P01213	254 aa		21.41	■■□□□ 1.02
CAPN1-222	ENST00000532285	CRYAB	P02511	175 aa	Known RBP	21.41	■■□□□ 1.02
CAPN1-222	ENST00000532285	COX7A2	P14406	83 aa		21.41	■■□□□ 1.02
CAPN1-222	ENST00000532285	CD46	P15529	392 aa		21.41	■■□□□ 1.02
CAPN1-222	ENST00000532285	CRHR1	P34998	444 aa		21.41	■■□□□ 1.02
CAPN1-222	ENST00000532285	CYB561	P49447	251 aa		21.41	■■□□□ 1.02
CAPN1-222	ENST00000532285	ST13	P50502	369 aa	Known RBP	21.41	■■□□□ 1.02
CAPN1-222	ENST00000532285	ID2	Q02363	134 aa		21.41	■■□□□ 1.02
CAPN1-222	ENST00000532285	CCDC153	Q494R4	210 aa		21.41	■■□□□ 1.02
CAPN1-222	ENST00000532285	SPINK14	Q6IE38	97 aa		21.41	■■□□□ 1.02
CAPN1-222	ENST00000532285	PAGE2	Q7Z2X7	111 aa		21.41	■■□□□ 1.02
CAPN1-222	ENST00000532285	PRR7	Q8TB68	274 aa		21.41	■■□□□ 1.02
CAPN1-222	ENST00000532285	SELENOM	Q8WWX9	145 aa		21.41	■■□□□ 1.02
CAPN1-222	ENST00000532285	C5orf34	Q96MH7	638 aa		21.41	■■□□□ 1.02
CAPN1-222	ENST00000532285	SLX1A	Q9BQ83	275 aa		21.41	■■□□□ 1.02
CAPN1-222	ENST00000532285	WDR41	Q9HAD4	459 aa		21.41	■■□□□ 1.02
CAPN1-222	ENST00000532285	FARSB	Q9NSD9	589 aa	Known RBP	21.41	■■□□□ 1.02
CAPN1-222	ENST00000532285	LRFN1	Q9P244	771 aa		21.41	■■□□□ 1.02
CAPN1-222	ENST00000532285	FLNB	O75369	2602 aa	Known RBP	21.41	■■□□□ 1.02
CAPN1-222	ENST00000532285		A0A1W2PR48	441 aa		21.4	■■□□□ 1.02
CAPN1-222	ENST00000532285	ZFAND5	O76080	213 aa		21.4	■■□□□ 1.02
CAPN1-222	ENST00000532285	NR2F6	P10588	404 aa		21.4	■■□□□ 1.02
CAPN1-222	ENST00000532285	MYL2	P10916	166 aa		21.4	■■□□□ 1.02
CAPN1-222	ENST00000532285	TRHR	P34981	398 aa	Predicted RBP	21.4	■■□□□ 1.02
CAPN1-222	ENST00000532285	STT3A	P46977	705 aa		21.4	■■□□□ 1.02
CAPN1-222	ENST00000532285	FOLH1	Q04609	750 aa		21.4	■■□□□ 1.02
CAPN1-222	ENST00000532285	ZNF324B	Q6AW86	544 aa	Predicted RBP	21.4	■■□□□ 1.02
CAPN1-222	ENST00000532285	WDR93	Q6P2C0	686 aa		21.4	■■□□□ 1.02
CAPN1-222	ENST00000532285	GPRIN3	Q6ZVF9	776 aa		21.4	■■□□□ 1.02
CAPN1-222	ENST00000532285	OR4N5	Q8IXE1	308 aa		21.4	■■□□□ 1.02
CAPN1-222	ENST00000532285	TMEM178A	Q8NBL3	297 aa		21.4	■■□□□ 1.02
CAPN1-222	ENST00000532285	THAP3	Q8WTV1	239 aa	Predicted RBP	21.4	■■□□□ 1.02
CAPN1-222	ENST00000532285	SCMH1	Q96GD3	660 aa		21.4	■■□□□ 1.02

Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms