RNA–Protein interactions for RNA: ENST00000531466.1

PTPRK-220, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 311 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-220ENST00000531466 LARSQ9P2J5 1176 aaKnown RBP3.12□□□□□ -1.91
PTPRK-220ENST00000531466 CD300AQ9UGN4 299 aa3.12□□□□□ -1.91
PTPRK-220ENST00000531466 DDX25Q9UHL0 483 aaKnown RBP3.12□□□□□ -1.91
PTPRK-220ENST00000531466 MUC19Q7Z5P9 8384 aa3.11□□□□□ -1.91
PTPRK-220ENST00000531466 A0A0U1RQK1 487 aa3.11□□□□□ -1.91
PTPRK-220ENST00000531466 A0A1W2PQ72 361 aa3.11□□□□□ -1.91
PTPRK-220ENST00000531466 ZNF320A2RRD8 509 aa3.11□□□□□ -1.91
PTPRK-220ENST00000531466 LRRD1A4D1F6 860 aa3.11□□□□□ -1.91
PTPRK-220ENST00000531466 OR6C74A6NCV1 312 aa3.11□□□□□ -1.91
PTPRK-220ENST00000531466 E9PBE3 544 aa3.11□□□□□ -1.91
PTPRK-220ENST00000531466 NPIPB9F8W1W9 429 aa3.11□□□□□ -1.91
PTPRK-220ENST00000531466 H0YCG3 227 aa3.11□□□□□ -1.91
PTPRK-220ENST00000531466 PDLIM1O00151 329 aa3.11□□□□□ -1.91
PTPRK-220ENST00000531466 E2F3O00716 465 aa3.11□□□□□ -1.91
PTPRK-220ENST00000531466 CTDSP2O14595 271 aa3.11□□□□□ -1.91
PTPRK-220ENST00000531466 LSM1O15116 133 aaKnown RBP3.11□□□□□ -1.91
PTPRK-220ENST00000531466 OGTO15294 1046 aa3.11□□□□□ -1.91
PTPRK-220ENST00000531466 TEX28O15482 410 aa3.11□□□□□ -1.91
PTPRK-220ENST00000531466 ADAM20O43506 726 aa3.11□□□□□ -1.91
PTPRK-220ENST00000531466 NIPSNAP2O75323 286 aa3.11□□□□□ -1.91
PTPRK-220ENST00000531466 MED24O75448 989 aa3.11□□□□□ -1.91
PTPRK-220ENST00000531466 GGPS1O95749 300 aa3.11□□□□□ -1.91
PTPRK-220ENST00000531466 TROVE2P10155 538 aaKnown RBP eCLIP3.11□□□□□ -1.91
PTPRK-220ENST00000531466 KRT3P12035 628 aa3.11□□□□□ -1.91
PTPRK-220ENST00000531466 GALP22466 123 aa3.11□□□□□ -1.91
PTPRK-220ENST00000531466 GLRA2P23416 452 aa3.11□□□□□ -1.91
PTPRK-220ENST00000531466 BMI1P35226 326 aa3.11□□□□□ -1.91
PTPRK-220ENST00000531466 HAAOP46952 286 aa3.11□□□□□ -1.91
PTPRK-220ENST00000531466 NRIP1P48552 1158 aa3.11□□□□□ -1.91
PTPRK-220ENST00000531466 NT5C2P49902 561 aa3.11□□□□□ -1.91
PTPRK-220ENST00000531466 ATP4BP51164 291 aa3.11□□□□□ -1.91
PTPRK-220ENST00000531466 ZNF41P51814 821 aaPredicted RBP3.11□□□□□ -1.91
PTPRK-220ENST00000531466 RAD23AP54725 363 aa3.11□□□□□ -1.91
PTPRK-220ENST00000531466 B2MP61769 119 aa3.11□□□□□ -1.91
PTPRK-220ENST00000531466 CDK3Q00526 305 aa3.11□□□□□ -1.91
PTPRK-220ENST00000531466 RPA4Q13156 261 aa3.11□□□□□ -1.91
PTPRK-220ENST00000531466 GNA13Q14344 377 aa3.11□□□□□ -1.91
PTPRK-220ENST00000531466 Q3ZCU0 254 aa3.11□□□□□ -1.91
PTPRK-220ENST00000531466 AARDQ4LEZ3 155 aa3.11□□□□□ -1.91
PTPRK-220ENST00000531466 FAM182AQ5T1J6 154 aa3.11□□□□□ -1.91
PTPRK-220ENST00000531466 RNASEH2BQ5TBB1 312 aaKnown RBP3.11□□□□□ -1.91
PTPRK-220ENST00000531466 OLFML2AQ68BL7 652 aa3.11□□□□□ -1.91
PTPRK-220ENST00000531466 THOC7Q6I9Y2 204 aaKnown RBP3.11□□□□□ -1.91
PTPRK-220ENST00000531466 DCLRE1AQ6PJP8 1040 aa3.11□□□□□ -1.91
PTPRK-220ENST00000531466 NHLRC1Q6VVB1 395 aa3.11□□□□□ -1.91
PTPRK-220ENST00000531466 NLRP9Q7RTR0 991 aa3.11□□□□□ -1.91
PTPRK-220ENST00000531466 TAS2R42Q7RTR8 314 aa3.11□□□□□ -1.91
PTPRK-220ENST00000531466 DNAAF5Q86Y56 855 aa3.11□□□□□ -1.91
PTPRK-220ENST00000531466 WDR49Q8IV35 697 aa3.11□□□□□ -1.91
PTPRK-220ENST00000531466 BBS5Q8N3I7 341 aa3.11□□□□□ -1.91
PTPRK-220ENST00000531466 ARFGAP2Q8N6H7 521 aa3.11□□□□□ -1.91
PTPRK-220ENST00000531466 CCDC185Q8N715 623 aa3.11□□□□□ -1.91
PTPRK-220ENST00000531466 FAM133AQ8N9E0 248 aa3.11□□□□□ -1.91
PTPRK-220ENST00000531466 CNNM3Q8NE01 707 aa3.11□□□□□ -1.91
PTPRK-220ENST00000531466 OR5T2Q8NGG2 359 aa3.11□□□□□ -1.91
PTPRK-220ENST00000531466 SLC5A11Q8WWX8 675 aa3.11□□□□□ -1.91
PTPRK-220ENST00000531466 NSMAFQ92636 917 aa3.11□□□□□ -1.91
PTPRK-220ENST00000531466 FAM162AQ96A26 154 aa3.11□□□□□ -1.91
PTPRK-220ENST00000531466 PPP1R14BQ96C90 147 aa3.11□□□□□ -1.91
PTPRK-220ENST00000531466 DTNBP1Q96EV8 351 aa3.11□□□□□ -1.91
PTPRK-220ENST00000531466 THOC1Q96FV9 657 aaKnown RBP3.11□□□□□ -1.91
PTPRK-220ENST00000531466 SNF8Q96H20 258 aa3.11□□□□□ -1.91
PTPRK-220ENST00000531466 RPGRIP1Q96KN7 1286 aa3.11□□□□□ -1.91
PTPRK-220ENST00000531466 THUMPD3Q9BV44 507 aaKnown RBP3.11□□□□□ -1.91
PTPRK-220ENST00000531466 CRNKL1Q9BZJ0 848 aaKnown RBP3.11□□□□□ -1.91
PTPRK-220ENST00000531466 API5Q9BZZ5 524 aaKnown RBP3.11□□□□□ -1.91
PTPRK-220ENST00000531466 MTMR12Q9C0I1 747 aa3.11□□□□□ -1.91
PTPRK-220ENST00000531466 AZI2Q9H6S1 392 aa3.11□□□□□ -1.91
PTPRK-220ENST00000531466 MTHFD2LQ9H903 347 aaPredicted RBP3.11□□□□□ -1.91
PTPRK-220ENST00000531466 TBC1D17Q9HA65 648 aa3.11□□□□□ -1.91
PTPRK-220ENST00000531466 KCNK13Q9HB14 408 aa3.11□□□□□ -1.91
PTPRK-220ENST00000531466 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.11□□□□□ -1.91
PTPRK-220ENST00000531466 SDHAF3Q9NRP4 125 aa3.11□□□□□ -1.91
PTPRK-220ENST00000531466 FAM114A2Q9NRY5 505 aa3.11□□□□□ -1.91
PTPRK-220ENST00000531466 GKN1Q9NS71 199 aa3.11□□□□□ -1.91
PTPRK-220ENST00000531466 SLC35D1Q9NTN3 355 aa3.11□□□□□ -1.91
PTPRK-220ENST00000531466 SLC39A1Q9NY26 324 aa3.11□□□□□ -1.91
PTPRK-220ENST00000531466 RSPH14Q9UHP6 348 aa3.11□□□□□ -1.91
PTPRK-220ENST00000531466 PIN4Q9Y237 131 aaKnown RBP3.11□□□□□ -1.91
PTPRK-220ENST00000531466 CBY1Q9Y3M2 126 aa3.11□□□□□ -1.91
PTPRK-220ENST00000531466 COMMD3-BMI1R4GMX3 469 aa3.11□□□□□ -1.91
PTPRK-220ENST00000531466 ZSCAN5CA6NGD5 496 aaPredicted RBP3.1□□□□□ -1.91
PTPRK-220ENST00000531466 NCF1BA6NI72 391 aaPredicted RBP3.1□□□□□ -1.91
PTPRK-220ENST00000531466 NCF1CA8MVU1 366 aaPredicted RBP3.1□□□□□ -1.91
PTPRK-220ENST00000531466 H0Y8G0 127 aa3.1□□□□□ -1.91
PTPRK-220ENST00000531466 UBE2CO00762 179 aa3.1□□□□□ -1.91
PTPRK-220ENST00000531466 CDX4O14627 284 aaPredicted RBP3.1□□□□□ -1.91
PTPRK-220ENST00000531466 TRDMT1O14717 391 aaKnown RBP3.1□□□□□ -1.91
PTPRK-220ENST00000531466 ZNF263O14978 683 aa3.1□□□□□ -1.91
PTPRK-220ENST00000531466 TBX10O75333 385 aa3.1□□□□□ -1.91
PTPRK-220ENST00000531466 ZNF189O75820 626 aaPredicted RBP3.1□□□□□ -1.91
PTPRK-220ENST00000531466 REC8O95072 547 aa3.1□□□□□ -1.91
PTPRK-220ENST00000531466 CCDC130P13994 396 aa3.1□□□□□ -1.91
PTPRK-220ENST00000531466 CCNA2P20248 432 aa3.1□□□□□ -1.91
PTPRK-220ENST00000531466 PTPN3P26045 913 aa3.1□□□□□ -1.91
PTPRK-220ENST00000531466 GP5P40197 560 aa3.1□□□□□ -1.91
PTPRK-220ENST00000531466 MAGEA4P43358 317 aa3.1□□□□□ -1.91
PTPRK-220ENST00000531466 STAT2P52630 851 aa3.1□□□□□ -1.91
PTPRK-220ENST00000531466 GBX2P52951 348 aaPredicted RBP3.1□□□□□ -1.91
PTPRK-220ENST00000531466 UBE2IP63279 158 aaKnown RBP3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms