RNA–Protein interactions for RNA: ENST00000531032.5

VPS28-214, Transcript of VPS28, ESCRT-I subunit, humanhuman

TSL 1 (best)

Gene VPS28, Length 573 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-214ENST00000531032 LDB3O75112 727 aa10.51□□□□□ -0.73
VPS28-214ENST00000531032 STMN1P16949 149 aa10.51□□□□□ -0.73
VPS28-214ENST00000531032 CNR1P21554 472 aa10.51□□□□□ -0.73
VPS28-214ENST00000531032 ATP5A1P25705 553 aaKnown RBP10.51□□□□□ -0.73
VPS28-214ENST00000531032 SSTR1P30872 391 aa10.51□□□□□ -0.73
VPS28-214ENST00000531032 MSH2P43246 934 aa10.51□□□□□ -0.73
VPS28-214ENST00000531032 NUP107P57740 925 aa10.51□□□□□ -0.73
VPS28-214ENST00000531032 IRF8Q02556 426 aa10.51□□□□□ -0.73
VPS28-214ENST00000531032 PCDH1Q08174 1060 aa10.51□□□□□ -0.73
VPS28-214ENST00000531032 C2orf54Q08AI8 447 aa10.51□□□□□ -0.73
VPS28-214ENST00000531032 PMPCAQ10713 525 aa10.51□□□□□ -0.73
VPS28-214ENST00000531032 CHIT1Q13231 466 aa10.51□□□□□ -0.73
VPS28-214ENST00000531032 HIST2H2ACQ16777 129 aaPredicted RBP10.51□□□□□ -0.73
VPS28-214ENST00000531032 HYAL4Q2M3T9 481 aa10.51□□□□□ -0.73
VPS28-214ENST00000531032 ZNF750Q32MQ0 723 aa10.51□□□□□ -0.73
VPS28-214ENST00000531032 GXYLT1Q4G148 440 aa10.51□□□□□ -0.73
VPS28-214ENST00000531032 TMEM35AQ53FP2 167 aa10.51□□□□□ -0.73
VPS28-214ENST00000531032 HIST2H2AA3Q6FI13 130 aa10.51□□□□□ -0.73
VPS28-214ENST00000531032 ACAD11Q709F0 780 aa10.51□□□□□ -0.73
VPS28-214ENST00000531032 CYS1Q717R9 158 aa10.51□□□□□ -0.73
VPS28-214ENST00000531032 LRRC70Q7Z2Q7 622 aa10.51□□□□□ -0.73
VPS28-214ENST00000531032 MAATS1Q7Z4T9 603 aa10.51□□□□□ -0.73
VPS28-214ENST00000531032 DMRTC2Q8IXT2 367 aaPredicted RBP10.51□□□□□ -0.73
VPS28-214ENST00000531032 LAS2Q8IYD9 372 aa10.51□□□□□ -0.73
VPS28-214ENST00000531032 FAM109AQ8N4B1 249 aa10.51□□□□□ -0.73
VPS28-214ENST00000531032 ACOT4Q8N9L9 421 aa10.51□□□□□ -0.73
VPS28-214ENST00000531032 C7orf57Q8NEG2 295 aa10.51□□□□□ -0.73
VPS28-214ENST00000531032 OR5L2Q8NGL0 311 aa10.51□□□□□ -0.73
VPS28-214ENST00000531032 ZNF721Q8TF20 911 aa10.51□□□□□ -0.73
VPS28-214ENST00000531032 ZNF473Q8WTR7 871 aaKnown RBP10.51□□□□□ -0.73
VPS28-214ENST00000531032 PYROXD1Q8WU10 500 aa10.51□□□□□ -0.73
VPS28-214ENST00000531032 CDKL2Q92772 493 aa10.51□□□□□ -0.73
VPS28-214ENST00000531032 ANKRD9Q96BM1 317 aaPredicted RBP10.51□□□□□ -0.73
VPS28-214ENST00000531032 CPNE1Q99829 537 aa10.51□□□□□ -0.73
VPS28-214ENST00000531032 MAPKAP1Q9BPZ7 522 aa10.51□□□□□ -0.73
VPS28-214ENST00000531032 CD244Q9BZW8 370 aa10.51□□□□□ -0.73
VPS28-214ENST00000531032 UCK2Q9BZX2 261 aa10.51□□□□□ -0.73
VPS28-214ENST00000531032 DPH5Q9H2P9 285 aa10.51□□□□□ -0.73
VPS28-214ENST00000531032 IL1RL2Q9HB29 575 aa10.51□□□□□ -0.73
VPS28-214ENST00000531032 PNPLA3Q9NST1 481 aa10.51□□□□□ -0.73
VPS28-214ENST00000531032 CD274Q9NZQ7 290 aa10.51□□□□□ -0.73
VPS28-214ENST00000531032 TXNDC16Q9P2K2 825 aa10.51□□□□□ -0.73
VPS28-214ENST00000531032 TNFRSF10DQ9UBN6 386 aa10.51□□□□□ -0.73
VPS28-214ENST00000531032 SNX24Q9Y343 169 aa10.51□□□□□ -0.73
VPS28-214ENST00000531032 LIPGQ9Y5X9 500 aa10.51□□□□□ -0.73
VPS28-214ENST00000531032 EML6Q6ZMW3 1958 aa10.51□□□□□ -0.73
VPS28-214ENST00000531032 TCRBV9S1A1TA0A576 114 aa10.5□□□□□ -0.73
VPS28-214ENST00000531032 FAM159BA6NKW6 160 aa10.5□□□□□ -0.73
VPS28-214ENST00000531032 FIGNL2A6NMB9 653 aa10.5□□□□□ -0.73
VPS28-214ENST00000531032 G3V3Y1 287 aa10.5□□□□□ -0.73
VPS28-214ENST00000531032 RTCAO00442 366 aaKnown RBP10.5□□□□□ -0.73
VPS28-214ENST00000531032 BCKDKO14874 412 aa10.5□□□□□ -0.73
VPS28-214ENST00000531032 EIF3HO15372 352 aaKnown RBP eCLIP10.5□□□□□ -0.73
VPS28-214ENST00000531032 CCNT2O60583 730 aaKnown RBP10.5□□□□□ -0.73
VPS28-214ENST00000531032 ETHE1O95571 254 aa10.5□□□□□ -0.73
VPS28-214ENST00000531032 C1QAP02745 245 aa10.5□□□□□ -0.73
VPS28-214ENST00000531032 HIST1H1TP22492 207 aaPredicted RBP10.5□□□□□ -0.73
VPS28-214ENST00000531032 ACVR2AP27037 513 aa10.5□□□□□ -0.73
VPS28-214ENST00000531032 SERPINB1P30740 379 aa10.5□□□□□ -0.73
VPS28-214ENST00000531032 GP5P40197 560 aa10.5□□□□□ -0.73
VPS28-214ENST00000531032 MAGEA5P43359 124 aa10.5□□□□□ -0.73
VPS28-214ENST00000531032 RAB10P61026 200 aa10.5□□□□□ -0.73
VPS28-214ENST00000531032 IGLV3-21P80748 117 aaPredicted RBP10.5□□□□□ -0.73
VPS28-214ENST00000531032 MRPS25P82663 173 aaKnown RBP10.5□□□□□ -0.73
VPS28-214ENST00000531032 FOXO1Q12778 655 aa10.5□□□□□ -0.73
VPS28-214ENST00000531032 MPEG1Q2M385 716 aa10.5□□□□□ -0.73
VPS28-214ENST00000531032 OPN5Q6U736 354 aa10.5□□□□□ -0.73
VPS28-214ENST00000531032 SYT10Q6XYQ8 523 aa10.5□□□□□ -0.73
VPS28-214ENST00000531032 FAM47EQ6ZV65 393 aa10.5□□□□□ -0.73
VPS28-214ENST00000531032 TRILQ7L0X0 811 aa10.5□□□□□ -0.73
VPS28-214ENST00000531032 CCDC71Q8IV32 467 aaPredicted RBP10.5□□□□□ -0.73
VPS28-214ENST00000531032 C17orf53Q8N3J3 647 aaPredicted RBP10.5□□□□□ -0.73
VPS28-214ENST00000531032 TMEM251Q8N6I4 163 aa10.5□□□□□ -0.73
VPS28-214ENST00000531032 OR5M3Q8NGP4 307 aa10.5□□□□□ -0.73
VPS28-214ENST00000531032 NUBPLQ8TB37 319 aa10.5□□□□□ -0.73
VPS28-214ENST00000531032 UBTD2Q8WUN7 234 aa10.5□□□□□ -0.73
VPS28-214ENST00000531032 SREK1Q8WXA9 508 aaKnown RBP10.5□□□□□ -0.73
VPS28-214ENST00000531032 UBE2E3Q969T4 207 aa10.5□□□□□ -0.73
VPS28-214ENST00000531032 SMC6Q96SB8 1091 aa10.5□□□□□ -0.73
VPS28-214ENST00000531032 SAYSD1Q9NPB0 183 aa10.5□□□□□ -0.73
VPS28-214ENST00000531032 KCNJ16Q9NPI9 418 aa10.5□□□□□ -0.73
VPS28-214ENST00000531032 SACM1LQ9NTJ5 587 aa10.5□□□□□ -0.73
VPS28-214ENST00000531032 COPS7AQ9UBW8 275 aa10.5□□□□□ -0.73
VPS28-214ENST00000531032 RNF112Q9ULX5 631 aa10.5□□□□□ -0.73
VPS28-214ENST00000531032 FAM215AQ9Y5M1 114 aa10.5□□□□□ -0.73
VPS28-214ENST00000531032 SPACA6W5XKT8 324 aa10.5□□□□□ -0.73
VPS28-214ENST00000531032 MED13LQ71F56 2210 aa10.5□□□□□ -0.73
VPS28-214ENST00000531032 AQP7O14520 342 aa10.49□□□□□ -0.73
VPS28-214ENST00000531032 FGF17O60258 216 aa10.49□□□□□ -0.73
VPS28-214ENST00000531032 SUSD5O60279 629 aa10.49□□□□□ -0.73
VPS28-214ENST00000531032 S100BP04271 92 aaPredicted RBP10.49□□□□□ -0.73
VPS28-214ENST00000531032 IGKV3-11P04433 115 aa10.49□□□□□ -0.73
VPS28-214ENST00000531032 HOXD4P09016 255 aaPredicted RBP10.49□□□□□ -0.73
VPS28-214ENST00000531032 CCL3P10147 92 aa10.49□□□□□ -0.73
VPS28-214ENST00000531032 COX7A2P14406 83 aa10.49□□□□□ -0.73
VPS28-214ENST00000531032 TNNI3P19429 210 aa10.49□□□□□ -0.73
VPS28-214ENST00000531032 STT3AP46977 705 aa10.49□□□□□ -0.73
VPS28-214ENST00000531032 DNASE1L1P49184 302 aa10.49□□□□□ -0.73
VPS28-214ENST00000531032 ETF1P62495 437 aaKnown RBP10.49□□□□□ -0.73
VPS28-214ENST00000531032 ID2Q02363 134 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms