RNA–Protein interactions for RNA: ENST00000529866.5

COPB1-207, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 729 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-207ENST00000529866 PGGT1BP53609 377 aa9.61□□□□□ -0.87
COPB1-207ENST00000529866 AP1S2P56377 157 aa9.61□□□□□ -0.87
COPB1-207ENST00000529866 RAB38P57729 211 aa9.61□□□□□ -0.87
COPB1-207ENST00000529866 BTN3A2P78410 334 aa9.61□□□□□ -0.87
COPB1-207ENST00000529866 RBBP5Q15291 538 aaKnown RBP9.61□□□□□ -0.87
COPB1-207ENST00000529866 TOR1AIP1Q5JTV8 583 aa9.61□□□□□ -0.87
COPB1-207ENST00000529866 SLC22A10Q63ZE4 541 aa9.61□□□□□ -0.87
COPB1-207ENST00000529866 CCDC137Q6PK04 289 aaKnown RBP9.61□□□□□ -0.87
COPB1-207ENST00000529866 CLNKQ7Z7G1 428 aa9.61□□□□□ -0.87
COPB1-207ENST00000529866 LMNTD2Q8IXW0 634 aa9.61□□□□□ -0.87
COPB1-207ENST00000529866 ZNF595Q8IYB9 648 aa9.61□□□□□ -0.87
COPB1-207ENST00000529866 PM20D2Q8IYS1 436 aa9.61□□□□□ -0.87
COPB1-207ENST00000529866 SLC35F6Q8N357 371 aa9.61□□□□□ -0.87
COPB1-207ENST00000529866 CIARTQ8N365 385 aaPredicted RBP9.61□□□□□ -0.87
COPB1-207ENST00000529866 VWA5B2Q8N398 1253 aa9.61□□□□□ -0.87
COPB1-207ENST00000529866 MCUQ8NE86 351 aa9.61□□□□□ -0.87
COPB1-207ENST00000529866 TNIP2Q8NFZ5 429 aa9.61□□□□□ -0.87
COPB1-207ENST00000529866 OR56A3Q8NH54 315 aa9.61□□□□□ -0.87
COPB1-207ENST00000529866 GAL3ST3Q96A11 431 aa9.61□□□□□ -0.87
COPB1-207ENST00000529866 ISL2Q96A47 359 aa9.61□□□□□ -0.87
COPB1-207ENST00000529866 PYCR2Q96C36 320 aa9.61□□□□□ -0.87
COPB1-207ENST00000529866 NDNQ99608 321 aa9.61□□□□□ -0.87
COPB1-207ENST00000529866 TRIM54Q9BYV2 358 aa9.61□□□□□ -0.87
COPB1-207ENST00000529866 OR8D2Q9GZM6 311 aa9.61□□□□□ -0.87
COPB1-207ENST00000529866 SLC6A15Q9H2J7 730 aa9.61□□□□□ -0.87
COPB1-207ENST00000529866 PELI2Q9HAT8 420 aa9.61□□□□□ -0.87
COPB1-207ENST00000529866 PLAC1Q9HBJ0 212 aa9.61□□□□□ -0.87
COPB1-207ENST00000529866 COPS7AQ9UBW8 275 aa9.61□□□□□ -0.87
COPB1-207ENST00000529866 FBXO5Q9UKT4 447 aa9.61□□□□□ -0.87
COPB1-207ENST00000529866 DYRK1BQ9Y463 629 aa9.61□□□□□ -0.87
COPB1-207ENST00000529866 ZANQ9Y493 2812 aa9.61□□□□□ -0.87
COPB1-207ENST00000529866 SDR42E2A6NKP2 422 aa9.6□□□□□ -0.87
COPB1-207ENST00000529866 HAUS5O94927 633 aa9.6□□□□□ -0.87
COPB1-207ENST00000529866 C8BP07358 591 aa9.6□□□□□ -0.87
COPB1-207ENST00000529866 SMIM10L1P0DMW3 83 aa9.6□□□□□ -0.87
COPB1-207ENST00000529866 MLNP12872 115 aa9.6□□□□□ -0.87
COPB1-207ENST00000529866 CTSSP25774 331 aa9.6□□□□□ -0.87
COPB1-207ENST00000529866 HPDP32754 393 aaPredicted RBP9.6□□□□□ -0.87
COPB1-207ENST00000529866 CPA2P48052 419 aa9.6□□□□□ -0.87
COPB1-207ENST00000529866 ZNF136P52737 540 aa9.6□□□□□ -0.87
COPB1-207ENST00000529866 RNF4P78317 190 aa9.6□□□□□ -0.87
COPB1-207ENST00000529866 STX4Q12846 297 aa9.6□□□□□ -0.87
COPB1-207ENST00000529866 EFTUD2Q15029 972 aaKnown RBP eCLIP9.6□□□□□ -0.871e-8■■■■□ 22.8
COPB1-207ENST00000529866 MPEG1Q2M385 716 aa9.6□□□□□ -0.87
COPB1-207ENST00000529866 MSS51Q4VC12 460 aa9.6□□□□□ -0.87
COPB1-207ENST00000529866 RBM20Q5T481 1227 aaKnown RBP9.6□□□□□ -0.87
COPB1-207ENST00000529866 RNASEH2BQ5TBB1 312 aaKnown RBP9.6□□□□□ -0.87
COPB1-207ENST00000529866 NSUN5P2Q63ZY6 315 aa9.6□□□□□ -0.87
COPB1-207ENST00000529866 YTHDF3Q7Z739 585 aaKnown RBP9.6□□□□□ -0.87
COPB1-207ENST00000529866 TMPRSS11BQ86T26 416 aa9.6□□□□□ -0.87
COPB1-207ENST00000529866 DND1Q8IYX4 353 aaKnown RBP9.6□□□□□ -0.87
COPB1-207ENST00000529866 LRRC25Q8N386 305 aaPredicted RBP9.6□□□□□ -0.87
COPB1-207ENST00000529866 ANKRD53Q8N9V6 530 aa9.6□□□□□ -0.87
COPB1-207ENST00000529866 FAM47BQ8NA70 645 aa9.6□□□□□ -0.87
COPB1-207ENST00000529866 TTLQ8NG68 377 aa9.6□□□□□ -0.87
COPB1-207ENST00000529866 SLC22A8Q8TCC7 542 aa9.6□□□□□ -0.87
COPB1-207ENST00000529866 EEF1AKMT1Q8WVE0 214 aa9.6□□□□□ -0.87
COPB1-207ENST00000529866 SREK1Q8WXA9 508 aaKnown RBP9.6□□□□□ -0.87
COPB1-207ENST00000529866 NEIL2Q969S2 332 aa9.6□□□□□ -0.87
COPB1-207ENST00000529866 SMIM10Q96HG1 83 aa9.6□□□□□ -0.87
COPB1-207ENST00000529866 JSRP1Q96MG2 331 aaPredicted RBP9.6□□□□□ -0.87
COPB1-207ENST00000529866 TSNARE1Q96NA8 513 aa9.6□□□□□ -0.87
COPB1-207ENST00000529866 OR4K3Q96R72 315 aa9.6□□□□□ -0.87
COPB1-207ENST00000529866 WDR83Q9BRX9 315 aaKnown RBP9.6□□□□□ -0.87
COPB1-207ENST00000529866 SPNS1Q9H2V7 528 aa9.6□□□□□ -0.87
COPB1-207ENST00000529866 SEMA4BQ9NPR2 832 aaPredicted RBP9.6□□□□□ -0.87
COPB1-207ENST00000529866 HOMER3Q9NSC5 361 aa9.6□□□□□ -0.87
COPB1-207ENST00000529866 C20orf96Q9NUD7 363 aaPredicted RBP9.6□□□□□ -0.87
COPB1-207ENST00000529866 TAS2R13Q9NYV9 303 aa9.6□□□□□ -0.87
COPB1-207ENST00000529866 TRPS1Q9UHF7 1281 aa9.6□□□□□ -0.87
COPB1-207ENST00000529866 MAGEB16A2A368 324 aa9.59□□□□□ -0.87
COPB1-207ENST00000529866 SH3D21A4FU49 640 aa9.59□□□□□ -0.87
COPB1-207ENST00000529866 RNF212BA8MTL3 300 aa9.59□□□□□ -0.87
COPB1-207ENST00000529866 C17orf105B2RV13 164 aa9.59□□□□□ -0.87
COPB1-207ENST00000529866 TGFBR3LH3BV60 316 aa9.59□□□□□ -0.87
COPB1-207ENST00000529866 PGRMC1O00264 195 aaKnown RBP9.59□□□□□ -0.87
COPB1-207ENST00000529866 ERI3O43414 337 aaKnown RBP9.59□□□□□ -0.87
COPB1-207ENST00000529866 ERN1O75460 977 aaKnown RBP9.59□□□□□ -0.87
COPB1-207ENST00000529866 IL18BPO95998 194 aa9.59□□□□□ -0.87
COPB1-207ENST00000529866 COX7A2P14406 83 aa9.59□□□□□ -0.87
COPB1-207ENST00000529866 TNNI3P19429 210 aa9.59□□□□□ -0.87
COPB1-207ENST00000529866 FPR1P21462 350 aa9.59□□□□□ -0.87
COPB1-207ENST00000529866 GDF1P27539 372 aa9.59□□□□□ -0.87
COPB1-207ENST00000529866 GSTM2P28161 218 aa9.59□□□□□ -0.87
COPB1-207ENST00000529866 GABRB3P28472 473 aa9.59□□□□□ -0.87
COPB1-207ENST00000529866 TRPC1P48995 793 aa9.59□□□□□ -0.87
COPB1-207ENST00000529866 WNT3P56703 355 aa9.59□□□□□ -0.87
COPB1-207ENST00000529866 DUSP8Q13202 625 aa9.59□□□□□ -0.87
COPB1-207ENST00000529866 SERTAD2Q14140 314 aa9.59□□□□□ -0.87
COPB1-207ENST00000529866 HSP90AA5PQ58FG0 334 aa9.59□□□□□ -0.87
COPB1-207ENST00000529866 PRAMEF20Q5VT98 475 aa9.59□□□□□ -0.87
COPB1-207ENST00000529866 IGDCC3Q8IVU1 814 aa9.59□□□□□ -0.87
COPB1-207ENST00000529866 C7orf57Q8NEG2 295 aa9.59□□□□□ -0.87
COPB1-207ENST00000529866 GABPB2Q8TAK5 448 aaPredicted RBP9.59□□□□□ -0.87
COPB1-207ENST00000529866 NUBPLQ8TB37 319 aa9.59□□□□□ -0.87
COPB1-207ENST00000529866 SLC2A12Q8TD20 617 aa9.59□□□□□ -0.87
COPB1-207ENST00000529866 PAQR8Q8TEZ7 354 aa9.59□□□□□ -0.87
COPB1-207ENST00000529866 PTPMT1Q8WUK0 201 aaPredicted RBP9.59□□□□□ -0.87
COPB1-207ENST00000529866 KIAA1191Q96A73 305 aa9.59□□□□□ -0.87
COPB1-207ENST00000529866 FBXL8Q96CD0 374 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms