RNA–Protein interactions for RNA: ENST00000529661.1

C11orf88-204, Transcript of chromosome 11 open reading frame 88, humanhuman

TSL 3

Gene C11orf88, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-204ENST00000529661 STXBP4Q6ZWJ1 553 aa3.89□□□□□ -1.79
C11orf88-204ENST00000529661 TAF8Q7Z7C8 310 aa3.89□□□□□ -1.79
C11orf88-204ENST00000529661 C17orf64Q86WR6 236 aa3.89□□□□□ -1.79
C11orf88-204ENST00000529661 OR2T6Q8NHC8 308 aa3.89□□□□□ -1.79
C11orf88-204ENST00000529661 CHURC1Q8WUH1 139 aa3.89□□□□□ -1.79
C11orf88-204ENST00000529661 MRPL53Q96EL3 112 aaKnown RBP3.89□□□□□ -1.79
C11orf88-204ENST00000529661 ZNF274Q96GC6 653 aaPredicted RBP3.89□□□□□ -1.79
C11orf88-204ENST00000529661 ZNF300Q96RE9 604 aaPredicted RBP3.89□□□□□ -1.79
C11orf88-204ENST00000529661 KRT12Q99456 494 aa3.89□□□□□ -1.79
C11orf88-204ENST00000529661 OPRPNQ99935 248 aaPredicted RBP3.89□□□□□ -1.79
C11orf88-204ENST00000529661 DCLRE1BQ9H816 532 aa3.89□□□□□ -1.79
C11orf88-204ENST00000529661 HPF1Q9NWY4 346 aa3.89□□□□□ -1.79
C11orf88-204ENST00000529661 FAM153AQ9UHL3 310 aa3.89□□□□□ -1.79
C11orf88-204ENST00000529661 XPO7Q9UIA9 1087 aaKnown RBP3.89□□□□□ -1.79
C11orf88-204ENST00000529661 BLOC1S6Q9UL45 172 aa3.89□□□□□ -1.79
C11orf88-204ENST00000529661 PPP1R3CQ9UQK1 317 aa3.89□□□□□ -1.79
C11orf88-204ENST00000529661 PLEKHA6Q9Y2H5 1048 aa3.89□□□□□ -1.79
C11orf88-204ENST00000529661 OR1A2Q9Y585 309 aa3.89□□□□□ -1.79
C11orf88-204ENST00000529661 IGKV3D-20A0A0C4DH25 116 aa3.88□□□□□ -1.79
C11orf88-204ENST00000529661 NDUFAF8A1L188 74 aa3.88□□□□□ -1.79
C11orf88-204ENST00000529661 TRIM64CA6NLI5 447 aa3.88□□□□□ -1.79
C11orf88-204ENST00000529661 TCP10L2B9ZVM9 353 aa3.88□□□□□ -1.79
C11orf88-204ENST00000529661 ANGPTL1O95841 491 aa3.88□□□□□ -1.79
C11orf88-204ENST00000529661 IGHEP01854 428 aa3.88□□□□□ -1.79
C11orf88-204ENST00000529661 SERPINF2P08697 491 aa3.88□□□□□ -1.79
C11orf88-204ENST00000529661 GLRA1P23415 457 aa3.88□□□□□ -1.79
C11orf88-204ENST00000529661 RPA1P27694 616 aa3.88□□□□□ -1.79
C11orf88-204ENST00000529661 TNFRSF4P43489 277 aa3.88□□□□□ -1.79
C11orf88-204ENST00000529661 TSFMP43897 325 aaKnown RBP3.88□□□□□ -1.79
C11orf88-204ENST00000529661 PITPNBP48739 271 aa3.88□□□□□ -1.79
C11orf88-204ENST00000529661 KCNK10P57789 538 aa3.88□□□□□ -1.79
C11orf88-204ENST00000529661 SSTP61278 116 aa3.88□□□□□ -1.79
C11orf88-204ENST00000529661 DRP2Q13474 957 aa3.88□□□□□ -1.79
C11orf88-204ENST00000529661 KRT31Q15323 416 aa3.88□□□□□ -1.79
C11orf88-204ENST00000529661 TAF7Q15545 349 aaPredicted RBP3.88□□□□□ -1.79
C11orf88-204ENST00000529661 OR1C1Q15619 314 aa3.88□□□□□ -1.79
C11orf88-204ENST00000529661 INAQ16352 499 aa3.88□□□□□ -1.79
C11orf88-204ENST00000529661 SGSM1Q2NKQ1 1148 aa3.88□□□□□ -1.79
C11orf88-204ENST00000529661 HLA-BQ31612 363 aa3.88□□□□□ -1.79
C11orf88-204ENST00000529661 WDR88Q6ZMY6 472 aa3.88□□□□□ -1.79
C11orf88-204ENST00000529661 Q6ZSR9 355 aa3.88□□□□□ -1.79
C11orf88-204ENST00000529661 CHMP1BQ7LBR1 199 aa3.88□□□□□ -1.79
C11orf88-204ENST00000529661 KDM8Q8N371 416 aa3.88□□□□□ -1.79
C11orf88-204ENST00000529661 GPR148Q8TDV2 347 aa3.88□□□□□ -1.79
C11orf88-204ENST00000529661 TAF4BQ92750 862 aa3.88□□□□□ -1.79
C11orf88-204ENST00000529661 LINC00479Q96M42 142 aa3.88□□□□□ -1.79
C11orf88-204ENST00000529661 NSMCE2Q96MF7 247 aa3.88□□□□□ -1.79
C11orf88-204ENST00000529661 TSGA13Q96PP4 275 aa3.88□□□□□ -1.79
C11orf88-204ENST00000529661 AGPAT1Q99943 283 aa3.88□□□□□ -1.79
C11orf88-204ENST00000529661 OVOL2Q9BRP0 275 aa3.88□□□□□ -1.79
C11orf88-204ENST00000529661 CLEC7AQ9BXN2 247 aa3.88□□□□□ -1.79
C11orf88-204ENST00000529661 KRT23Q9C075 422 aa3.88□□□□□ -1.79
C11orf88-204ENST00000529661 FAM212BQ9NTI7 297 aaPredicted RBP3.88□□□□□ -1.79
C11orf88-204ENST00000529661 PLCXD1Q9NUJ7 323 aa3.88□□□□□ -1.79
C11orf88-204ENST00000529661 NDUFA13Q9P0J0 144 aa3.88□□□□□ -1.79
C11orf88-204ENST00000529661 KLHL8Q9P2G9 620 aaPredicted RBP3.88□□□□□ -1.79
C11orf88-204ENST00000529661 PLCL2Q9UPR0 1127 aa3.88□□□□□ -1.79
C11orf88-204ENST00000529661 NUDCQ9Y266 331 aa3.88□□□□□ -1.79
C11orf88-204ENST00000529661 ARHGAP42A6NI28 874 aa3.87□□□□□ -1.79
C11orf88-204ENST00000529661 ANHXE9PGG2 379 aa3.87□□□□□ -1.79
C11orf88-204ENST00000529661 EEF2KO00418 725 aaKnown RBP3.87□□□□□ -1.79
C11orf88-204ENST00000529661 SIGLEC5O15389 551 aa3.87□□□□□ -1.79
C11orf88-204ENST00000529661 MAGEC1O60732 1142 aa3.87□□□□□ -1.79
C11orf88-204ENST00000529661 MT-ATP6P00846 226 aa3.87□□□□□ -1.79
C11orf88-204ENST00000529661 GPR183P32249 361 aa3.87□□□□□ -1.79
C11orf88-204ENST00000529661 FHITP49789 147 aa3.87□□□□□ -1.79
C11orf88-204ENST00000529661 RIGQ13278 110 aa3.87□□□□□ -1.79
C11orf88-204ENST00000529661 HEPACAMQ14CZ8 416 aa3.87□□□□□ -1.79
C11orf88-204ENST00000529661 NKAIN2Q5VXU1 208 aa3.87□□□□□ -1.79
C11orf88-204ENST00000529661 ZCCHC12Q6PEW1 402 aa3.87□□□□□ -1.79
C11orf88-204ENST00000529661 CDHR3Q6ZTQ4 885 aa3.87□□□□□ -1.79
C11orf88-204ENST00000529661 CATSPERDQ86XM0 798 aa3.87□□□□□ -1.79
C11orf88-204ENST00000529661 MAPK1IP1LQ8NDC0 245 aa3.87□□□□□ -1.79
C11orf88-204ENST00000529661 OR5M9Q8NGP3 310 aa3.87□□□□□ -1.79
C11orf88-204ENST00000529661 RAB39BQ96DA2 213 aa3.87□□□□□ -1.79
C11orf88-204ENST00000529661 SAMD8Q96LT4 415 aa3.87□□□□□ -1.79
C11orf88-204ENST00000529661 KCNK16Q96T55 309 aa3.87□□□□□ -1.79
C11orf88-204ENST00000529661 COQ7Q99807 217 aa3.87□□□□□ -1.79
C11orf88-204ENST00000529661 SLC26A1Q9H2B4 701 aa3.87□□□□□ -1.79
C11orf88-204ENST00000529661 C3orf14Q9HBI5 128 aa3.87□□□□□ -1.79
C11orf88-204ENST00000529661 S100A14Q9HCY8 104 aa3.87□□□□□ -1.79
C11orf88-204ENST00000529661 HOMER3Q9NSC5 361 aa3.87□□□□□ -1.79
C11orf88-204ENST00000529661 ZDHHC18Q9NUE0 388 aa3.87□□□□□ -1.79
C11orf88-204ENST00000529661 BARHL2Q9NY43 387 aa3.87□□□□□ -1.79
C11orf88-204ENST00000529661 TECRQ9NZ01 308 aaKnown RBP3.87□□□□□ -1.79
C11orf88-204ENST00000529661 CNOT2Q9NZN8 540 aaKnown RBP3.87□□□□□ -1.79
C11orf88-204ENST00000529661 ACTR3BQ9P1U1 418 aa3.87□□□□□ -1.79
C11orf88-204ENST00000529661 CSNK1G3Q9Y6M4 447 aa3.87□□□□□ -1.79
C11orf88-204ENST00000529661 CLCA3PQ9Y6N3 262 aa3.87□□□□□ -1.79
C11orf88-204ENST00000529661 RNF215Q9Y6U7 377 aa3.87□□□□□ -1.79
C11orf88-204ENST00000529661 PTPRUQ92729 1446 aa3.87□□□□□ -1.79
C11orf88-204ENST00000529661 SHISA7A6NL88 538 aa3.86□□□□□ -1.79
C11orf88-204ENST00000529661 NDC80O14777 642 aa3.86□□□□□ -1.79
C11orf88-204ENST00000529661 RASGRF2O14827 1237 aa3.86□□□□□ -1.79
C11orf88-204ENST00000529661 SSX5O60225 188 aa3.86□□□□□ -1.79
C11orf88-204ENST00000529661 LRP3O75074 770 aa3.86□□□□□ -1.79
C11orf88-204ENST00000529661 APRTP07741 180 aa3.86□□□□□ -1.79
C11orf88-204ENST00000529661 KRT5P13647 590 aa3.86□□□□□ -1.79
C11orf88-204ENST00000529661 GPX3P22352 226 aa3.86□□□□□ -1.79
C11orf88-204ENST00000529661 OPRL1P41146 370 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 164.3 ms